Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0632
(289 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 29 0.71
Z92813-1|CAB07286.1| 393|Caenorhabditis elegans Hypothetical pr... 28 0.93
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 27 2.2
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 26 5.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 25 6.6
AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical ... 25 6.6
Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z67882-6|CAA91804.1| 406|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z50797-10|CAA90677.1| 406|Caenorhabditis elegans Hypothetical p... 25 8.7
Z50028-5|CAA90338.1| 661|Caenorhabditis elegans Hypothetical pr... 25 8.7
AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical ... 25 8.7
AL032624-4|CAA21522.1| 661|Caenorhabditis elegans Hypothetical ... 25 8.7
AL032624-1|CAA21521.1| 209|Caenorhabditis elegans Hypothetical ... 25 8.7
AC024771-2|AAK70659.1| 697|Caenorhabditis elegans Hypothetical ... 25 8.7
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 0.71
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 184 QNRXPKETN-PGDVPPPPSNATQGSP 258
QNR P + PG PPPP + T+ +P
Sbjct: 275 QNRAPAPSEAPGKAPPPPQDYTRPAP 300
>Z92813-1|CAB07286.1| 393|Caenorhabditis elegans Hypothetical
protein T28A8.1 protein.
Length = 393
Score = 28.3 bits (60), Expect = 0.93
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 87 AVSTIKIWRSVWSKRRSRTSEGHV 16
A+++I+ W+S+WS RT E HV
Sbjct: 370 ALASIESWQSLWSILTGRTQEVHV 393
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/59 (25%), Positives = 21/59 (35%)
Frame = +1
Query: 73 DSGNCPPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQNRXPKETNPGDVPPPPSNATQ 249
+ GN R P P + TP +G+ + P G PPPP+ Q
Sbjct: 88 EEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQ 146
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 25.8 bits (54), Expect = 5.0
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = +1
Query: 109 PPNSVTPNSHESGKIXXXXXXXXXXQNRXPKETNPGDVPPPPSNATQGSP 258
PP + TP S +I + P+ +P +PPPPS P
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTE-KPETPRAESPDPLPPPPSKKRPKEP 384
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 25.4 bits (53), Expect = 6.6
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +1
Query: 88 PPRMP--FRPPNSVTPNSHESGKIXXXXXXXXXXQNRXPKETNPGDVPPPP 234
PPR P RPP +TP S + + R P T P +PPPP
Sbjct: 151 PPRSPPPRRPP--MTPPSPQR----RPPRTPPSPEPRNPPRTPPSPIPPPP 195
>AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical
protein Y50D7A.1 protein.
Length = 791
Score = 25.4 bits (53), Expect = 6.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 258 WRXLCCIGRWWG 223
W+ + IGRWWG
Sbjct: 362 WKSIPTIGRWWG 373
>Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 187 NRXPKETNPGDVPPPPSNATQ 249
NR P E++ PPPPS++++
Sbjct: 325 NRRPVESSSRGPPPPPSSSSR 345
>Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 187 NRXPKETNPGDVPPPPSNATQ 249
NR P E++ PPPPS++++
Sbjct: 325 NRRPVESSSRGPPPPPSSSSR 345
>Z67882-6|CAA91804.1| 406|Caenorhabditis elegans Hypothetical
protein F22E10.5 protein.
Length = 406
Score = 25.0 bits (52), Expect = 8.7
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -2
Query: 258 WRXLCCIGRWWGYVAGIC 205
W C+ RWW +V +C
Sbjct: 43 WLDELCMKRWWEFVITLC 60
>Z50797-10|CAA90677.1| 406|Caenorhabditis elegans Hypothetical
protein F22E10.5 protein.
Length = 406
Score = 25.0 bits (52), Expect = 8.7
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -2
Query: 258 WRXLCCIGRWWGYVAGIC 205
W C+ RWW +V +C
Sbjct: 43 WLDELCMKRWWEFVITLC 60
>Z50028-5|CAA90338.1| 661|Caenorhabditis elegans Hypothetical
protein F46F6.1a protein.
Length = 661
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 88 PPRMPFRPPNSVTPNSHESGK 150
PP +P R P SV P+S SG+
Sbjct: 615 PPPLPPRRPASVGPSSTSSGQ 635
>AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical
protein Y87G2A.1 protein.
Length = 780
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = +1
Query: 115 NSVTPNSHESGKIXXXXXXXXXXQNRXPKETNPGDVPPPPSNATQGS 255
+ V + +E G+ ++ PK + PPPPS + S
Sbjct: 689 DDVVMDDYEDGEENGDKKITASRRSESPKPASSSSEPPPPSTTEEAS 735
>AL032624-4|CAA21522.1| 661|Caenorhabditis elegans Hypothetical
protein F46F6.1a protein.
Length = 661
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 88 PPRMPFRPPNSVTPNSHESGK 150
PP +P R P SV P+S SG+
Sbjct: 615 PPPLPPRRPASVGPSSTSSGQ 635
>AL032624-1|CAA21521.1| 209|Caenorhabditis elegans Hypothetical
protein F46F6.1b protein.
Length = 209
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 88 PPRMPFRPPNSVTPNSHESGK 150
PP +P R P SV P+S SG+
Sbjct: 163 PPPLPPRRPASVGPSSTSSGQ 183
>AC024771-2|AAK70659.1| 697|Caenorhabditis elegans Hypothetical
protein Y40B10A.4 protein.
Length = 697
Score = 25.0 bits (52), Expect = 8.7
Identities = 8/33 (24%), Positives = 18/33 (54%)
Frame = -2
Query: 108 PERHAWWAVSTIKIWRSVWSKRRSRTSEGHVIH 10
PE + +W + +K W+ +W+ ++ T + H
Sbjct: 566 PEDNDYWNLVRMKPWKKLWAFEQTNTVTIPIYH 598
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.137 0.449
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,334,237
Number of Sequences: 27780
Number of extensions: 115154
Number of successful extensions: 284
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 269889950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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