Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0629
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.9  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   6.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.4  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 116 TRYLSFFMCSYSFLNWRIWKVL 51
           T  LSFF+C   F  + +W +L
Sbjct: 294 TVVLSFFLCLIPFRVFILWIIL 315


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +2

Query: 476 FTVFTSFSNLLSELF*YNENFIVTLTAN-GRRRRVAENRYFDLKV 607
           F+     SN + +   Y E+ + ++T + GRRR+  E R   L V
Sbjct: 557 FSSLKELSNHMVKNSHYKEHIMRSITESGGRRRQTREKRKKSLPV 601


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +1

Query: 73  FRKLYEHIKNDKYLVGQRLVNY 138
           +   Y+H+  +  L  +R+VNY
Sbjct: 21  YESRYDHLDVESILNNRRMVNY 42


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 383 ISSIIFYLFVSFTKSNLFIYRS*WERRKVREKFRLQ 276
           + SI +  F++  K    IY+   +R K REK  ++
Sbjct: 532 LKSIAWRAFLAVLKRRTEIYKGLIDRIKSREKLTMK 567


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,981
Number of Sequences: 336
Number of extensions: 2302
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)