Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0629
         (631 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC142694-1|AAI42695.1|  910|Homo sapiens membrane-associated rin...    64   4e-10
BC142679-1|AAI42680.1|  910|Homo sapiens membrane-associated rin...    64   4e-10
BC046148-1|AAH46148.1|  635|Homo sapiens MARCH6 protein protein.       64   4e-10
AF009301-1|AAB66840.1|  490|Homo sapiens TEB4 protein protein.         64   4e-10
AB011169-1|BAA25523.1|  971|Homo sapiens KIAA0597 protein protein.     64   4e-10
BC038406-1|AAH38406.2|  904|Homo sapiens chromosome 3 open readi...    33   0.83 
BC030599-1|AAH30599.1|  782|Homo sapiens C3orf20 protein protein.      33   0.83 
AK131481-1|BAD18626.1|  378|Homo sapiens protein ( Homo sapiens ...    33   0.83 

>BC142694-1|AAI42695.1|  910|Homo sapiens membrane-associated ring
           finger (C3HC4) 6 protein.
          Length = 910

 Score = 64.1 bits (149), Expect = 4e-10
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = +1

Query: 55  TFQIRQFRKLYEHIKNDKYLVGQRLVNYDHRRQKQQHS 168
           +FQ+RQF++LYEHIKNDKYLVGQRLVNY+ +  KQ  S
Sbjct: 864 SFQVRQFKRLYEHIKNDKYLVGQRLVNYERKSGKQGSS 901


>BC142679-1|AAI42680.1|  910|Homo sapiens membrane-associated ring
           finger (C3HC4) 6 protein.
          Length = 910

 Score = 64.1 bits (149), Expect = 4e-10
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = +1

Query: 55  TFQIRQFRKLYEHIKNDKYLVGQRLVNYDHRRQKQQHS 168
           +FQ+RQF++LYEHIKNDKYLVGQRLVNY+ +  KQ  S
Sbjct: 864 SFQVRQFKRLYEHIKNDKYLVGQRLVNYERKSGKQGSS 901


>BC046148-1|AAH46148.1|  635|Homo sapiens MARCH6 protein protein.
          Length = 635

 Score = 64.1 bits (149), Expect = 4e-10
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = +1

Query: 55  TFQIRQFRKLYEHIKNDKYLVGQRLVNYDHRRQKQQHS 168
           +FQ+RQF++LYEHIKNDKYLVGQRLVNY+ +  KQ  S
Sbjct: 589 SFQVRQFKRLYEHIKNDKYLVGQRLVNYERKSGKQGSS 626


>AF009301-1|AAB66840.1|  490|Homo sapiens TEB4 protein protein.
          Length = 490

 Score = 64.1 bits (149), Expect = 4e-10
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = +1

Query: 55  TFQIRQFRKLYEHIKNDKYLVGQRLVNYDHRRQKQQHS 168
           +FQ+RQF++LYEHIKNDKYLVGQRLVNY+ +  KQ  S
Sbjct: 444 SFQVRQFKRLYEHIKNDKYLVGQRLVNYERKSGKQGSS 481


>AB011169-1|BAA25523.1|  971|Homo sapiens KIAA0597 protein protein.
          Length = 971

 Score = 64.1 bits (149), Expect = 4e-10
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = +1

Query: 55   TFQIRQFRKLYEHIKNDKYLVGQRLVNYDHRRQKQQHS 168
            +FQ+RQF++LYEHIKNDKYLVGQRLVNY+ +  KQ  S
Sbjct: 925  SFQVRQFKRLYEHIKNDKYLVGQRLVNYERKSGKQGSS 962


>BC038406-1|AAH38406.2|  904|Homo sapiens chromosome 3 open reading
           frame 20 protein.
          Length = 904

 Score = 33.1 bits (72), Expect = 0.83
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 51  EDLPDPPIQKTIRTHKERQVPGRSAARELRSPETEAA 161
           E  P  P++KT + H + +V  R  ARE RSP   AA
Sbjct: 625 ESAPVSPVRKTTKIHTKAKVTSRGKAREGRSPTRWAA 661


>BC030599-1|AAH30599.1|  782|Homo sapiens C3orf20 protein protein.
          Length = 782

 Score = 33.1 bits (72), Expect = 0.83
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 51  EDLPDPPIQKTIRTHKERQVPGRSAARELRSPETEAA 161
           E  P  P++KT + H + +V  R  ARE RSP   AA
Sbjct: 503 ESAPVSPVRKTTKIHTKAKVTSRGKAREGRSPTRWAA 539


>AK131481-1|BAD18626.1|  378|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16655 fis, clone TESTI4038721. ).
          Length = 378

 Score = 33.1 bits (72), Expect = 0.83
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 51  EDLPDPPIQKTIRTHKERQVPGRSAARELRSPETEAA 161
           E  P  P++KT + H + +V  R  ARE RSP   AA
Sbjct: 126 ESAPVSPVRKTTKIHTKAKVTSRGKAREGRSPTRWAA 162


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,860,103
Number of Sequences: 237096
Number of extensions: 1277694
Number of successful extensions: 2910
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2910
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)