Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0629
         (631 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   1.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   7.5  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 42  ASLEDLPDPPIQKTIRTHKERQVPG 116
           A L+ L   P Q  I  H E+ VPG
Sbjct: 508 AHLKRLDHQPYQYKIAVHSEQNVPG 532


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 93  HKERQVPGRSAARELRSPETEAAAQQC 173
           H + Q+     +   RSP ++A A QC
Sbjct: 666 HTQSQLHLHLTSPPARSPSSQAQASQC 692


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 523 IQRKFYCHLNCQRSSSARRGKSL 591
           I    Y + NC  +SS+RRG  +
Sbjct: 635 ISTTIYENQNCLDASSSRRGSKI 657


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,360
Number of Sequences: 438
Number of extensions: 3171
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)