Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0628
(577 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 65 6e-12
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 62 6e-11
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 57 2e-09
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 52 5e-08
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 40 3e-04
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 35 0.007
SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy... 35 0.007
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 31 0.12
SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 0.85
SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomy... 26 3.4
SPCC1795.12c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 6.0
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 25 6.0
SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 6.0
SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation fac... 25 6.0
SPAC637.12c |mst1||histone acetyltransferase Mst1|Schizosaccharo... 25 6.0
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 25 6.0
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 25 7.9
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 65.3 bits (152), Expect = 6e-12
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Frame = +1
Query: 271 VEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGL------ 432
+ E V R DI++T+KLW HR V A+ +L+ L L+YID YL+HWP L
Sbjct: 69 IRESGVPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFALLSGPEE 128
Query: 433 -----NADYSHSDVDFMETWRGLEDAQRMGKLK 516
+ + DV ETW+ +E+ GK++
Sbjct: 129 LPRNEKGELIYEDVPIEETWQAMEELLETGKVR 161
Score = 46.4 bits (105), Expect = 3e-06
Identities = 24/58 (41%), Positives = 34/58 (58%)
Frame = +2
Query: 83 NGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGE 256
NG +P+IGLGT+ +S + ++ V A+ GYRH DTA +Y E+EIGE
Sbjct: 19 NGDKIPSIGLGTW---------RSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGE 67
Score = 25.4 bits (53), Expect = 6.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 504 G*VKGIGLSNFNKQQLETVL 563
G V+ IG+SNFN + L+ VL
Sbjct: 158 GKVRYIGISNFNNEYLDRVL 177
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 62.1 bits (144), Expect = 6e-11
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Frame = +1
Query: 271 VEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGLNA--DY 444
++E V R+DI++T+KLW H V +A+ +LK L LDY+D YL+HWP+ D
Sbjct: 70 IKESGVPRKDIWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFKTGEDK 129
Query: 445 SHSDVD---------FMETWRGLEDAQRMGKLK 516
D D ETW+ +E GK++
Sbjct: 130 FPKDKDGNLIYEKNPIEETWKAMEKLLETGKVR 162
Score = 43.2 bits (97), Expect = 3e-05
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 83 NGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGE 256
+G +P +GLGT+ +S+ Q ++ V A+ GYRH D A++Y E E+G+
Sbjct: 20 DGSKIPGLGLGTW---------RSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGD 68
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 504 G*VKGIGLSNFNKQQLETVL 563
G V+ IGLSNFN LE +L
Sbjct: 159 GKVRHIGLSNFNDTNLERIL 178
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 57.2 bits (132), Expect = 2e-09
Identities = 30/83 (36%), Positives = 47/83 (56%)
Frame = +1
Query: 259 VKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGLNA 438
V + ++E V R +FIT+K+ H + +A+N+SL+KLG DY+DLYL+H PI
Sbjct: 60 VGVALKEANVPRSKLFITSKV---MHNVDNIPEALNESLRKLGTDYLDLYLLHSPI---- 112
Query: 439 DYSHSDVDFMETWRGLEDAQRMG 507
+ + E W+ +E A G
Sbjct: 113 PFYEKKIPISEGWKAMETALGTG 135
Score = 37.5 bits (83), Expect = 0.001
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 95 MPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIG 253
+PA G+GT L + G + ++ + D V A+ G+ H D A VY E+E+G
Sbjct: 12 VPAYGVGTALFKKEKGEI---NRTIVDSVKNALAAGFIHIDCAEVYGNEEEVG 61
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 52.4 bits (120), Expect = 5e-08
Identities = 33/88 (37%), Positives = 51/88 (57%)
Frame = +1
Query: 256 AVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGLN 435
A+ +EE KREDI+ T+KL + ++ ++ +I+ S+K GL YIDL+L+H P G
Sbjct: 59 AILKFMEETGTKREDIWFTSKLNDLSGYKSTLS-SIDASVKACGLGYIDLFLLHSPYG-- 115
Query: 436 ADYSHSDVDFMETWRGLEDAQRMGKLKA 519
D +E+W+ LE GKL+A
Sbjct: 116 --------DRIESWKALEKGVEEGKLRA 135
Score = 35.9 bits (79), Expect = 0.004
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +2
Query: 71 LKMNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEI 250
+K+NNG P G+Y+ V ++K D V A+ GYRH D+A +Y E +
Sbjct: 6 VKLNNGLKCPQFAYGSYM------VNRTK---CFDSVYAALQCGYRHIDSAQMYHNEADC 56
Query: 251 G 253
G
Sbjct: 57 G 57
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 39.5 bits (88), Expect = 3e-04
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = +2
Query: 50 STMEVPSLKMNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASV 229
S E ++ + NG +P IG G ++ K + +V +A+D GYRH DTA+V
Sbjct: 4 SQTESTTVTLTNGMVIPRIGFGAFM---------LKYNECYGLVTQALDSGYRHIDTAAV 54
Query: 230 YETEQEIGE 256
Y E G+
Sbjct: 55 YGNEDICGK 63
Score = 38.7 bits (86), Expect = 6e-04
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +1
Query: 274 EEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIG 429
E+ VKR DIF+T+KL N + A AI SL LG YIDL+L+ P G
Sbjct: 70 EKNNVKRTDIFLTSKLANCSDYYSTRA-AIRSSLHHLG-TYIDLFLIQSPAG 119
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 35.1 bits (77), Expect = 0.007
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 313 TKLWNTQH-RRTEVAQAINDSLKKLGLDYIDLYLMHWP 423
TKL NT R + + +N SLK+LGL Y+D+ + H P
Sbjct: 102 TKLPNTTGLSRKHIIEGLNASLKRLGLPYVDVIMAHRP 139
Score = 25.4 bits (53), Expect = 6.0
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 83 NGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVY 232
+G + A LG +L + G K + + +A D+G FDTA +Y
Sbjct: 21 SGLKVSAFSLGGWLTYGNEGYDVEHTK---NCLKQAWDLGINTFDTAEIY 67
>SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 276
Score = 35.1 bits (77), Expect = 0.007
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = +1
Query: 286 VKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPIGLNADYSHSDVDF 465
+KREDI + TK+ ++ +A+ SL++ G +D+ L+H P V
Sbjct: 67 IKREDITLITKIPDSLQGFERTWKAVEQSLRRTGRPKLDVVLIHSP--------KWPVRR 118
Query: 466 METWRGLEDAQRMGKL 513
+E+WR L Q+ G++
Sbjct: 119 IESWRALLQHQKEGRI 134
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 31.1 bits (67), Expect = 0.12
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 10/53 (18%)
Frame = +1
Query: 289 KREDIFITTKLWNTQHRRTE----------VAQAINDSLKKLGLDYIDLYLMH 417
+R++IF+ TK ++ T + +A++ SLK+LG+D IDLY +H
Sbjct: 74 RRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVH 126
>SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 390
Score = 28.3 bits (60), Expect = 0.85
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 313 TKLWNTQHRRTEVAQ-AINDSLKKLGLDYIDLYLMHW 420
+K + T +RR+E+ Q +++ KKL +D+Y +HW
Sbjct: 125 SKEYLTAYRRSELLQNKLHEYQKKLITRVLDMYQLHW 161
>SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 874
Score = 26.2 bits (55), Expect = 3.4
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +1
Query: 313 TKLWNTQHRRTEVAQAINDSLKKLGLDYID 402
TK+WN H+ E + ++D++++ L +D
Sbjct: 680 TKIWNCVHQLLEREKKMSDAMRQTKLTIVD 709
>SPCC1795.12c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 112
Score = 25.4 bits (53), Expect = 6.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 323 HSLVVIKISSLLTTPSSTFIFTALQFLVQF 234
H L+V ++ + T+ FIFT FL+ F
Sbjct: 72 HMLLVQRLKRVSTSSRRLFIFTLSMFLIAF 101
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 25.4 bits (53), Expect = 6.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 439 RHLIQWASASNKDLYNPDLVSSV 371
+HL +W S+S LY+P L S V
Sbjct: 1780 QHLARWISSSKSYLYSPLLSSHV 1802
>SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 497
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 221 RYRNDGIRHLWRALQHHGAACPWTSLRRSDQ 129
RYRN ++ H G+ PW+S+ R ++
Sbjct: 113 RYRNGASVSRSSSIGHSGSTAPWSSVGRHNR 143
>SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation factor
CPSF-73 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 797
Score = 25.4 bits (53), Expect = 6.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -1
Query: 547 CCLLKLDSPMPLTYPFAEHLPILARSP*SLRPNDYNRHLIQW 422
CC+L D+ + P PIL SP S + DY + +I+W
Sbjct: 239 CCIL--DNHWSASQPPLP-FPILFLSPTSTKTIDYAKSMIEW 277
>SPAC637.12c |mst1||histone acetyltransferase
Mst1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 25.4 bits (53), Expect = 6.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 451 NDYNRHLIQWASASNKDL 398
NDYN+ L +W + N DL
Sbjct: 57 NDYNKRLDEWITIDNIDL 74
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 25.4 bits (53), Expect = 6.0
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +3
Query: 465 HGDLARIGRCSANG*VKGIGLSN 533
H D++++ R A+ +KGIGL++
Sbjct: 8 HNDVSKLERIGAHSHIKGIGLND 30
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 25.0 bits (52), Expect = 7.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 239 QFRKRRRYRNDGIRHLWRALQH 174
Q RKR ++ I H+W AL +
Sbjct: 298 QLRKREKHLEQKIFHIWHALSY 319
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,318,055
Number of Sequences: 5004
Number of extensions: 46438
Number of successful extensions: 151
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 246098644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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