Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0628
         (577 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   0.41 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   0.41 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    25   0.71 
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   5.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   5.0  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 19  RTVPVGAWAGVNDGSALVKNEQRQRHARHR 108
           + VP   W GV  GSA    E+RQ +  H+
Sbjct: 157 KRVPPTNWVGVFGGSAWSWREERQAYYLHQ 186


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 19  RTVPVGAWAGVNDGSALVKNEQRQRHARHR 108
           + VP   W GV  GSA    E+RQ +  H+
Sbjct: 157 KRVPPTNWVGVFGGSAWSWREERQAYYLHQ 186


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 215 RNDGIRHLWRALQHHGAACPWTSLRRSDQTQGTCPG 108
           RN G+ H  +  QH+GAA       +S Q Q    G
Sbjct: 14  RNGGVEHPHQHQQHYGAAVQVPQQTQSVQQQSQQAG 49


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -1

Query: 565 FSTVS--NCCLLKLDSPMPLTYPF 500
           FST S  N C++ LD    +T PF
Sbjct: 129 FSTASILNLCVISLDRYWAITDPF 152


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 28  PVGAWAGVNDGSALVKNEQRQRHARHR 108
           P   W  V  GSA   NE+R+++  H+
Sbjct: 160 PPNNWLSVFWGSAWQWNEERKQYYLHQ 186


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,954
Number of Sequences: 438
Number of extensions: 3486
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)