Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0627
         (556 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148...    58   6e-09
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974...    38   3e-04
03_05_0859 - 28329837-28329919,28330062-28330131,28330498-283305...    36   0.022
02_05_0110 + 25914110-25915006,25915726-25915797,25916411-259166...    36   0.022
04_04_0639 + 26883810-26883821,26884131-26884307,26885276-268853...    33   0.12 
01_01_1190 + 9463973-9465732,9466210-9466440,9467664-9467793,946...    33   0.15 
12_02_1010 + 25269721-25269787,25270162-25270308,25270407-252707...    31   0.47 
03_05_0688 + 26762668-26762893,26763027-26763101,26763865-267640...    30   1.4  
10_08_0571 - 18855317-18855541,18855667-18855747,18855849-188559...    29   2.5  
01_01_0499 - 3675303-3675484,3676888-3676982,3677046-3677096,367...    29   2.5  
07_03_1575 - 27848977-27849095,27849254-27849302,27850270-278502...    28   4.4  
03_02_0616 - 9874882-9874974,9875067-9875189,9875284-9875379,987...    28   4.4  
06_01_0449 - 3176135-3176329,3176531-3177289,3177420-3177905,317...    28   5.8  
12_02_1011 + 25276077-25276143,25276575-25276721,25276855-252769...    27   7.6  
04_03_0570 - 17242362-17242694,17242714-17242758                       27   7.6  

>02_01_0003 +
           13079-13610,14005-14312,14364-14549,14620-14707,
           14807-14887,14980-15044,15357-15497,15578-15694,
           15995-16237,16326-16383,18127-18224
          Length = 638

 Score = 57.6 bits (133), Expect = 6e-09
 Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
 Frame = +3

Query: 255 LDMEG-VIAPDQTDESQDMGDPNXXXXXXXXXXXXXXXXXAMRAFSEQKYDEAINLYTAA 431
           L++EG ++  D  D  Q MGDP+                 AM A SE K +EAI+  T A
Sbjct: 325 LELEGDIVESDHQDPPQKMGDPSIDVTEENRDASQEAKSKAMEAMSEGKLEEAIDHLTKA 384

Query: 432 IQFNPQSALLFAKRGTGVSKN*PTQ*CIKDCTHALELNCDS 554
           I  NP SA+++  R +   K       I+D   ALE+N DS
Sbjct: 385 ILLNPLSAIMYGTRASVFIKMKKPVAAIRDANAALEINPDS 425



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 25/46 (54%), Positives = 32/46 (69%)
 Frame = +1

Query: 16  NAEQLDQLKSFVEICKTQPQLLHHPQLAFFKDYLISLGVSLPTATF 153
           +A ++ +L++FVE CK  P LL  P LAFF+DYL SLG  LP A F
Sbjct: 227 DASRVGELRTFVEACKKDPSLLADPNLAFFRDYLESLGAHLPAAAF 272


>09_04_0038 -
           13996505-13996836,13997047-13997077,13997307-13997420,
           13997546-13997686,13997787-13997851,13997943-13998039,
           13998096-13998257,13998360-13998473,14001263-14001311,
           14001967-14002047,14003504-14003561,14003671-14004031,
           14004129-14004213,14004320-14004591,14004712-14004914,
           14005419-14005494
          Length = 746

 Score = 37.5 bits (83), Expect(2) = 3e-04
 Identities = 22/53 (41%), Positives = 28/53 (52%)
 Frame = +3

Query: 396 KYDEAINLYTAAIQFNPQSALLFAKRGTGVSKN*PTQ*CIKDCTHALELNCDS 554
           K DEAI   T AI  NP SA+ +A R     K+      I+D   AL++N DS
Sbjct: 494 KLDEAIEHLTEAIVLNPTSAIAYATRAVIFVKSKKPNAAIRDADAALKINPDS 546



 Score = 23.8 bits (49), Expect(2) = 3e-04
 Identities = 13/48 (27%), Positives = 18/48 (37%)
 Frame = +3

Query: 255 LDMEGVIAPDQTDESQDMGDPNXXXXXXXXXXXXXXXXXAMRAFSEQK 398
           +++EG       D  Q MGDP+                  + AFSE K
Sbjct: 417 IELEGEAVEPDNDPPQKMGDPSVEVSDEKRDQAQLCKNKGVDAFSEGK 464


>03_05_0859 -
           28329837-28329919,28330062-28330131,28330498-28330549,
           28330671-28330798,28331283-28331483,28332183-28332317,
           28333116-28333275,28333824-28334019,28334070-28334252,
           28334382-28334507,28335090-28335214,28335389-28335541,
           28337267-28337472
          Length = 605

 Score = 35.9 bits (79), Expect = 0.022
 Identities = 17/55 (30%), Positives = 31/55 (56%)
 Frame = +3

Query: 381 AFSEQKYDEAINLYTAAIQFNPQSALLFAKRGTGVSKN*PTQ*CIKDCTHALELN 545
           AF E+++ +AIN YT AI+ N + A  ++ R     +    +    DCT A++++
Sbjct: 499 AFKEKQWQKAINFYTEAIKLNNKVATYYSNRAAAFLELASYRQAEADCTSAIDID 553


>02_05_0110 +
           25914110-25915006,25915726-25915797,25916411-25916699,
           25916864-25916949,25917267-25917490,25917674-25917740,
           25917830-25917889,25917995-25918078,25918475-25918555
          Length = 619

 Score = 35.9 bits (79), Expect = 0.022
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = +3

Query: 384 FSEQKYDEAINLYTAAIQFNPQSALLFAKRGTGVSKN*PTQ*CIKDCTHALELN 545
           F EQKY +A+  YT AI+ NP+   +++ R    +K       +KD    +EL+
Sbjct: 424 FKEQKYPDAVKHYTEAIRRNPKDPKVYSNRAACYTKLGAMPEGLKDAEKCIELD 477



 Score = 28.7 bits (61), Expect = 3.3
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = +3

Query: 381 AFSEQKYDEAINLYTAAIQFNPQSALLFAKRGTGVSKN*PTQ*CIKDCTHALELNCD 551
           AFS  +Y+EA   +T AI   P + +L++ R   ++        + D    +EL  D
Sbjct: 12  AFSAGRYEEAARHFTDAIALAPGNHVLYSNRSAALASVHRYSEALADAEKTVELKPD 68


>04_04_0639 +
           26883810-26883821,26884131-26884307,26885276-26885339,
           26886614-26887734,26888193-26888481,26888528-26888658,
           26888910-26889133,26889220-26889286,26889744-26889803,
           26889896-26889979,26890290-26890301
          Length = 746

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +3

Query: 384 FSEQKYDEAINLYTAAIQFNPQSALLFAKRGTGVSKN*PTQ*CIKDCTHALELN 545
           F +QKY EA+  Y+ A++ NP+   +++ R    +K       +KD    +EL+
Sbjct: 574 FKQQKYPEAVKHYSEALRRNPKDPRVYSNRAACYTKLGAMPEGLKDAEKCIELD 627


>01_01_1190 +
           9463973-9465732,9466210-9466440,9467664-9467793,
           9468723-9468888,9469528-9469859,9470284-9470513,
           9471535-9471613,9471689-9471865
          Length = 1034

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
 Frame = +3

Query: 378 RAFSEQKYDEAINLYTAAIQFNPQ----SALLFAKRGTGVSKN*PTQ*CIKDCTHALELN 545
           +AF   KY EA+  YTAA+  N +    SA+ FA R             I DC+ A+ L+
Sbjct: 809 KAFQAGKYSEAVEHYTAALLSNTESPRFSAICFANRAAAYQAMGQILDAIADCSLAIALD 868


>12_02_1010 +
           25269721-25269787,25270162-25270308,25270407-25270783,
           25271273-25271407,25272059-25272211,25272761-25272862,
           25273380-25273550,25273659-25273738,25273860-25273917
          Length = 429

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +3

Query: 372 AMRAFSEQKYDEAINLYTAAIQFNPQSALLFAKR 473
           A  AF+E +Y  AI  YT A++  P  A LFA R
Sbjct: 309 AKEAFAEGEYITAIYFYTKALEKAPLDATLFANR 342


>03_05_0688 +
           26762668-26762893,26763027-26763101,26763865-26764032,
           26764983-26765114,26765538-26765677,26765840-26765908,
           26766325-26766435,26766854-26766973,26768223-26768324,
           26769608-26769778,26769865-26769944,26770119-26770182
          Length = 485

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +3

Query: 378 RAFSEQKYDEAINLYTAAIQFNPQSALLFAKRGTGVSKN*PTQ*CIKDCTHALEL 542
           +AF E  Y  AI  YT A++ +P  A L++ R     ++   Q  + D    ++L
Sbjct: 365 KAFEEGDYAGAIIFYTEAMKLDPADATLYSNRSLCHLRSGAAQEALLDANDCIKL 419


>10_08_0571 -
           18855317-18855541,18855667-18855747,18855849-18855963,
           18856061-18856224,18856307-18856540,18856626-18856781,
           18857113-18857244,18857850-18857984,18858071-18858457,
           18858708-18858826,18858914-18859124,18859268-18859339,
           18859542-18859628,18859993-18860127,18860240-18860368
          Length = 793

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 15/63 (23%), Positives = 35/63 (55%), Gaps = 9/63 (14%)
 Frame = +3

Query: 384 FSEQKYDEAINLYTAAIQFNPQS---------ALLFAKRGTGVSKN*PTQ*CIKDCTHAL 536
           FS++++++A+  Y+ A+++ P S         A L+  R + + K    + C++DC  A+
Sbjct: 74  FSKREFEQALGFYSQALRYFPISPDGTDASLIATLYVNRASTMHKLGLLEECLRDCDRAI 133

Query: 537 ELN 545
            ++
Sbjct: 134 SVS 136


>01_01_0499 -
           3675303-3675484,3676888-3676982,3677046-3677096,
           3677191-3677270,3677423-3677593,3677836-3677937,
           3678092-3678244,3678392-3678523,3678702-3678788,
           3678987-3679126,3679246-3679660
          Length = 535

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 381 AFSEQKYDEAINLYTAAIQFNPQSALLFAKR 473
           +F+ + YD AI LY+ A++F+   A L++ R
Sbjct: 328 SFNNEDYDAAILLYSMAMKFDNTDAKLYSNR 358


>07_03_1575 -
           27848977-27849095,27849254-27849302,27850270-27850287,
           27850798-27851786,27852119-27852733,27852893-27852921,
           27853990-27854453,27854530-27854654,27854743-27855025,
           27855112-27856102,27856965-27857576,27857666-27858630
          Length = 1752

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 131 TPRDIR*SLKNANCGWCNSC 72
           T + +   L+   CGWCNSC
Sbjct: 756 TDQKLSVELRKEKCGWCNSC 775


>03_02_0616 -
           9874882-9874974,9875067-9875189,9875284-9875379,
           9875457-9875666,9875718-9875812,9876032-9876123,
           9876539-9876660
          Length = 276

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -3

Query: 554 AVTVQL*GMCAVFNTSLGWSVFGYTCPPFSKQQSTL 447
           A+TV     CA  N+  G+ +  Y CP FSK   T+
Sbjct: 55  ALTVHEESWCAYPNSRTGFLIICYQCPLFSKCSLTI 90


>06_01_0449 -
           3176135-3176329,3176531-3177289,3177420-3177905,
           3178302-3178421,3178637-3178703,3178784-3179007,
           3179149-3179234,3179936-3180509
          Length = 836

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 384 FSEQKYDEAINLYTAAIQFNPQSALLFAKR 473
           F +++Y EA   YT A++ NP+   +F+ R
Sbjct: 196 FKQKRYQEAAMHYTEAMKKNPKDPRVFSNR 225


>12_02_1011 +
           25276077-25276143,25276575-25276721,25276855-25276986,
           25277130-25277269,25277481-25277567,25277776-25277904,
           25278493-25278645,25278891-25278992,25279507-25279677,
           25279773-25279852,25280491-25280524
          Length = 413

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 381 AFSEQKYDEAINLYTAAIQFNPQSALLFAKR 473
           AF++  Y  AI  YT A+  +P  A LFA R
Sbjct: 304 AFAKGDYLTAIYFYTLAMDKSPLDATLFANR 334


>04_03_0570 - 17242362-17242694,17242714-17242758
          Length = 125

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 475 PRLANNKALCGLNCMAAVYRLIASSYFC 392
           PRL N+ ++CG   + AV RL+ S   C
Sbjct: 51  PRLVNSGSVCGRRVVWAVARLVGSRSGC 78


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,578,182
Number of Sequences: 37544
Number of extensions: 231875
Number of successful extensions: 500
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)