Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0625
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    26   1.2  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   3.6  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   6.3  

>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 324 CNA-RRPCQVRADDMVCATEVDVPLPAIVTPPLV 226
           CN   RP    A+ M C  +VD+PL AIV   LV
Sbjct: 595 CNGDNRPADCGANCM-CTHKVDIPLNAIVEVVLV 627


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +1

Query: 223 ANEWRRDDSGQRYIYLSGTDHIIRANLARSACIA 324
           ++ W  D +G   I+++GT   + +N     CIA
Sbjct: 42  SSSWVADKTGNAAIWVTGTIQRVVSNTFEGFCIA 75


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -2

Query: 198 TIFATSSFEISKPSDF-AHTL 139
           T+  ++SFE+ KP DF  H+L
Sbjct: 845 TLTESTSFELKKPKDFRKHSL 865


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,232
Number of Sequences: 2352
Number of extensions: 13597
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)