Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0625
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55375-5|AAC69045.1| 126|Caenorhabditis elegans Profilin protei... 56 3e-08
AY530910-1|AAT01435.1| 126|Caenorhabditis elegans profilin-3 pr... 56 3e-08
AY530908-1|AAT01433.1| 132|Caenorhabditis elegans profilin-1 pr... 41 7e-04
AL034393-15|CAA22318.1| 132|Caenorhabditis elegans Hypothetical... 41 7e-04
U40941-2|AAA81708.3| 131|Caenorhabditis elegans Profilin protei... 37 0.011
AY530909-1|AAT01434.1| 131|Caenorhabditis elegans profilin-2 pr... 37 0.011
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 2.1
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 2.1
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 29 2.1
>U55375-5|AAC69045.1| 126|Caenorhabditis elegans Profilin protein 3
protein.
Length = 126
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/65 (41%), Positives = 36/65 (55%)
Frame = +2
Query: 59 MSWQDYVDKQLMASRCVTKAAIAGHDGNVWAKSEGFEISKDEVAKIVAGFENESLLTSGG 238
MSW D ++ L+ S V+KAAI G DG VWAKS+ F IS +E F + L G
Sbjct: 1 MSWSDIINNNLIGSGNVSKAAILGFDGAVWAKSDNFNISVEEAVAAGKAFTSLDALLGTG 60
Query: 239 VTIAG 253
+ + G
Sbjct: 61 LRLEG 65
Score = 35.1 bits (77), Expect = 0.043
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 303 GKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEYLITCGY 434
G G KT QAV+IS+YE+ +QP+ + L +Y + Y
Sbjct: 83 GGSGFFIYKTIQAVIISIYEKGLQPEMCSKTTGALADYFRSIKY 126
>AY530910-1|AAT01435.1| 126|Caenorhabditis elegans profilin-3
protein.
Length = 126
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/65 (41%), Positives = 36/65 (55%)
Frame = +2
Query: 59 MSWQDYVDKQLMASRCVTKAAIAGHDGNVWAKSEGFEISKDEVAKIVAGFENESLLTSGG 238
MSW D ++ L+ S V+KAAI G DG VWAKS+ F IS +E F + L G
Sbjct: 1 MSWSDIINNNLIGSGNVSKAAILGFDGAVWAKSDNFNISVEEAVAAGKAFTSLDALLGTG 60
Query: 239 VTIAG 253
+ + G
Sbjct: 61 LRLEG 65
Score = 35.1 bits (77), Expect = 0.043
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 303 GKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEYLITCGY 434
G G KT QAV+IS+YE+ +QP+ + L +Y + Y
Sbjct: 83 GGSGFFIYKTIQAVIISIYEKGLQPEMCSKTTGALADYFRSIKY 126
>AY530908-1|AAT01433.1| 132|Caenorhabditis elegans profilin-1
protein.
Length = 132
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 65 WQDYVDKQLMASRCVTKAAIAGH-DGNVWAKSEG---FEISKDEVAKIVAGFENESLLTS 232
W Y+D A+ + + AI G DG+VWA++E F+ S++E+ VA F + + + +
Sbjct: 4 WNAYIDTMTAAAPSIKRCAIVGAADGSVWARTEADNVFKASEEELKTFVALFNDVTQVPA 63
Query: 233 GGVTIAG 253
G I G
Sbjct: 64 KGADIEG 70
>AL034393-15|CAA22318.1| 132|Caenorhabditis elegans Hypothetical
protein Y18D10A.20 protein.
Length = 132
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 65 WQDYVDKQLMASRCVTKAAIAGH-DGNVWAKSEG---FEISKDEVAKIVAGFENESLLTS 232
W Y+D A+ + + AI G DG+VWA++E F+ S++E+ VA F + + + +
Sbjct: 4 WNAYIDTMTAAAPSIKRCAIVGAADGSVWARTEADNVFKASEEELKTFVALFNDVTQVPA 63
Query: 233 GGVTIAG 253
G I G
Sbjct: 64 KGADIEG 70
>U40941-2|AAA81708.3| 131|Caenorhabditis elegans Profilin protein 2
protein.
Length = 131
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +2
Query: 65 WQDYVDKQLMASRCVTKAAIAGHDGNVWAKS---EGFEISKDEVAKIVAGFENESLLTSG 235
W DY+ S + +AAI G DG+VWA+S F ++ E+ + A F + + +
Sbjct: 4 WDDYIKLLFGKSPAIKRAAIIGSDGSVWARSGDANAFRATEVELKRFAALFNDINSVPGT 63
Query: 236 GVTI 247
G +
Sbjct: 64 GADL 67
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 306 KVGVHCMKTQQAVVISLYE-EPIQPQQAASVVEKLGEYLITCGY 434
+ G KT QA+VI++YE + Q + VE + +YL + GY
Sbjct: 88 QTGFFAAKTNQAIVIAMYEGDNAQSASVRAGVEYIAQYLASSGY 131
>AY530909-1|AAT01434.1| 131|Caenorhabditis elegans profilin-2
protein.
Length = 131
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +2
Query: 65 WQDYVDKQLMASRCVTKAAIAGHDGNVWAKS---EGFEISKDEVAKIVAGFENESLLTSG 235
W DY+ S + +AAI G DG+VWA+S F ++ E+ + A F + + +
Sbjct: 4 WDDYIKLLFGKSPAIKRAAIIGSDGSVWARSGDANAFRATEVELKRFAALFNDINSVPGT 63
Query: 236 GVTI 247
G +
Sbjct: 64 GADL 67
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 306 KVGVHCMKTQQAVVISLYE-EPIQPQQAASVVEKLGEYLITCGY 434
+ G KT QA+VI++YE + Q + VE + +YL + GY
Sbjct: 88 QTGFFAAKTNQAIVIAMYEGDNAQSASVRAGVEYIAQYLASSGY 131
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 209 ENESLLTSGGVTIAGSGTSTSVAQTISSARTWQGRRALHEDTASCGHFSL*RTHPTS 379
E +LL + ++G G S S T +SA +W D+ +CG ++L + PT+
Sbjct: 1328 ERVTLLAATTSLVSGVG-SVSFNFTCNSAASWMTAAGTIVDSVACGRYNLTTSTPTT 1383
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 209 ENESLLTSGGVTIAGSGTSTSVAQTISSARTWQGRRALHEDTASCGHFSL*RTHPTS 379
E +LL + ++G G S S T +SA +W D+ +CG ++L + PT+
Sbjct: 1328 ERVTLLAATTSLVSGVG-SVSFNFTCNSAASWMTAAGTIVDSVACGRYNLTTSTPTT 1383
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 209 ENESLLTSGGVTIAGSGTSTSVAQTISSARTWQGRRALHEDTASCGHFSL*RTHPTS 379
E +LL + ++G G S S T +SA +W D+ +CG ++L + PT+
Sbjct: 1328 ERVTLLAATTSLVSGVG-SVSFNFTCNSAASWMTAAGTIVDSVACGRYNLTTSTPTT 1383
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 209 ENESLLTSGGVTIAGSGTSTSVAQTISSARTWQGRRALHEDTASCGHFSL*RTHPTS 379
E +LL + ++G G S S T +SA +W D+ +CG ++L + PT+
Sbjct: 1328 ERVTLLAATTSLVSGVG-SVSFNFTCNSAASWMTAAGTIVDSVACGRYNLTTSTPTT 1383
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 182 EVAKIVAGFENESLLTSGGVTIAGSGTSTSVAQTISSART 301
E + + AG + TSGG T++GS STS ++ S+ T
Sbjct: 1216 ESSTMSAGTGSTETSTSGGSTVSGSSLSTSSTESSGSSST 1255
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,502,375
Number of Sequences: 27780
Number of extensions: 325053
Number of successful extensions: 870
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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