Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0623
         (747 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0683 + 5821598-5821916,5822348-5822987,5824250-5824329,582...    31   0.97 
12_01_0682 + 5817109-5817612,5817776-5817844,5818405-5818538,581...    31   0.97 
06_03_1496 - 30567968-30568210,30568345-30568513,30568635-305687...    29   3.9  
10_08_0672 + 19762340-19762432,19762543-19762735,19763225-197632...    28   9.1  

>12_01_0683 +
           5821598-5821916,5822348-5822987,5824250-5824329,
           5825405-5825750,5826237-5826411,5826479-5826524,
           5827179-5827384,5827616-5827696
          Length = 630

 Score = 31.1 bits (67), Expect = 0.97
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -1

Query: 681 VILENTVVCSFFI*KLRPPSRRDDLILLGKRATFPELTRYFKTFFRLTRSC 529
           + + + V+  + +   R  + +DDL+L+   ATF E+T +    +R+   C
Sbjct: 207 ITMNSRVMIEYDLRIKRGENEQDDLVLIDGAATFSEITNFIPYIYRIHGDC 257


>12_01_0682 +
           5817109-5817612,5817776-5817844,5818405-5818538,
           5819669-5819861
          Length = 299

 Score = 31.1 bits (67), Expect = 0.97
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 624 SRRDDLILLGKRATFPELTRYFKTFFRLTRSC 529
           S +DDL+L+   ATF E+T +    +R+   C
Sbjct: 115 SEQDDLLLVDGAATFSEITNFIPYIYRINGDC 146


>06_03_1496 - 30567968-30568210,30568345-30568513,30568635-30568736,
            30569087-30571855,30572402-30572430,30572546-30572659,
            30572735-30572846,30574730-30574845,30574928-30575068,
            30575121-30575243,30575346-30575478,30575842-30575972,
            30576065-30576300,30577073-30577376
          Length = 1573

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = +3

Query: 42   VARVIVFLRIPIA-FEELCKETAPTSVSGTKPKTRAFCSKLQVNDS--FLQSKELRLPKM 212
            V  V V +  P+A FE+     +P     T P  R FCS   V D   F QS ++ L ++
Sbjct: 1215 VEDVQVIIGRPLADFEQFISSASPVLYCSTCPADRNFCSPEWVRDGLCFHQSTDITLSRI 1274

Query: 213  F 215
            +
Sbjct: 1275 W 1275


>10_08_0672 +
           19762340-19762432,19762543-19762735,19763225-19763269,
           19763381-19763432,19763601-19763704,19763887-19763987,
           19764225-19764283,19764536-19764592,19764944-19764989,
           19765187-19765266,19766841-19767096,19767210-19767405,
           19768368-19768448,19768536-19768587,19768759-19768862,
           19769586-19769686,19769924-19769982,19770491-19770536,
           19770789-19770868,19770953-19771013
          Length = 621

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -3

Query: 223 LIKNIFGNLNSFDCRKLSLTCSLLQNARVLGFVPLTLVGAVSLHSSSNAIG 71
           L + +FG  + F  + L    +LL+N   LG+ PL   GA  L +SS   G
Sbjct: 49  LAEKVFGESSKFFEQPLGEKMALLRNRNYLGYTPL---GADKLDASSKFKG 96


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,468,909
Number of Sequences: 37544
Number of extensions: 328679
Number of successful extensions: 636
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)