Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0622
         (706 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006A1716 Cluster: UPI00006A1716 related cluster; n...    38   0.24 
UniRef50_A5K512 Cluster: Putative uncharacterized protein; n=1; ...    36   0.73 
UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;...    35   2.2  
UniRef50_Q041X2 Cluster: Predicted membrane protein; n=2; Lactob...    33   9.0  

>UniRef50_UPI00006A1716 Cluster: UPI00006A1716 related cluster; n=1;
           Xenopus tropicalis|Rep: UPI00006A1716 UniRef100 entry -
           Xenopus tropicalis
          Length = 158

 Score = 37.9 bits (84), Expect = 0.24
 Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
 Frame = -2

Query: 414 YLMTLSYKYLYVKSILCINCIFYMLDVYTYV------YFLFATMNY*L*KLAITFTFYIT 253
           YL  LSY YLY    + +  I Y L V  Y+      Y+L+A  NY L  L I +  Y T
Sbjct: 37  YLYALSY-YLYATIYMRLLIICYYLYVTIYIRLLFICYYLYAATNYML--LFICYYLYAT 93

Query: 252 IHQH--FINKTLYFRLYYM*TILYI 184
           I+ H  FI   LY    YM  +L+I
Sbjct: 94  IYMHLLFICYYLYAATIYM-RLLFI 117


>UniRef50_A5K512 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 409

 Score = 36.3 bits (80), Expect = 0.73
 Identities = 18/51 (35%), Positives = 31/51 (60%)
 Frame = -1

Query: 403 FILQIFVCKKHSVY*LHFLHVRRLYVCIFFVRNNELLTIKTCNYIHFLYYY 251
           F +++F CKK+    L  LH+  L++C  F++N E  T   CN  ++LY++
Sbjct: 109 FCIKLFTCKKYIR--LFSLHLDVLFICTIFLQNLENRTF-FCNLENYLYWF 156


>UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;
           n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
           - Equus caballus
          Length = 187

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
 Frame = -2

Query: 417 LYLMTLSYKYLYVKSILCINC---IFYMLDVYTYVYFLFATMNY*L*KLAITFTFYITIH 247
           +Y+    Y Y+Y    +CI     I+  + +Y Y+Y       Y    + I    YI I+
Sbjct: 61  IYIYIYIYPYIYPYIYICIYIYPYIYIYIYIYPYIYIYIYIYTYIYTHIYICTYLYIYIY 120

Query: 246 QHFINKTLYFRLY-YM*TILYISKQSTICYVINSYI 142
             FI   +Y  +Y Y    +YI     IC+   +Y+
Sbjct: 121 S-FIYIYMYTYIYMYTYIYIYIYTYVYICFYTYTYL 155



 Score = 32.7 bits (71), Expect = 9.0
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
 Frame = -2

Query: 417 LYLMTLSYKYLYVKSILCINCI-FYMLDVYTYVYFLFATMNY*L*KLAITFTFYITIHQH 241
           +Y+ T  Y ++Y+ + L I    F  + +YTY+Y       Y    + I F  Y  ++ +
Sbjct: 99  IYIYTYIYTHIYICTYLYIYIYSFIYIYMYTYIYMYTYIYIYIYTYVYICFYTYTYLYIY 158

Query: 240 FINKTLYFRLYYM*TILYISKQSTICYVI 154
               T  +   YM T +YI  +  I + I
Sbjct: 159 TYIYTHIYTYIYMSTFIYIYTRVYIYFYI 187


>UniRef50_Q041X2 Cluster: Predicted membrane protein; n=2;
           Lactobacillus|Rep: Predicted membrane protein -
           Lactobacillus gasseri (strain ATCC 33323 / DSM 20243)
          Length = 859

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = -1

Query: 403 FILQIFVCKKHS-VY*LHFLHVRRLYVCIFFVRNNELLTIKT-CNYIHFLYYYSSTFYQQ 230
           FI +I +  K+  +Y L FL    ++   F  RN+E+LT+     YI FL +Y +  +  
Sbjct: 2   FITKIKIHFKNKYLYWLSFLLPACIFASYFIYRNHEILTVDLGQQYIDFLAFYKNNLFSN 61

Query: 229 NLIF 218
            L F
Sbjct: 62  PLNF 65


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,099,160
Number of Sequences: 1657284
Number of extensions: 11703332
Number of successful extensions: 22259
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22217
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)