Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0621
(636 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 305 2e-83
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 293 5e-80
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 291 2e-79
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 291 2e-79
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 285 2e-77
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 284 3e-77
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 191 3e-49
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 191 3e-49
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 123 1e-28
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 121 5e-28
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 121 5e-28
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 121 5e-28
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 120 9e-28
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 119 2e-27
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 116 1e-26
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 115 3e-26
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 115 3e-26
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 114 4e-26
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 114 4e-26
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 114 4e-26
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 112 2e-25
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 111 4e-25
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 110 9e-25
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 95 3e-20
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 95 3e-20
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 94 7e-20
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 31 0.69
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 29 3.7
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 6.4
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 305 bits (749), Expect = 2e-83
Identities = 150/195 (76%), Positives = 157/195 (80%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGG+
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 230 APRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVV 409
LEPGTMDSVR+G GQ+FRPDNFVFGQSGAGNNWAKG YTEGAELVD+VLDVV
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 410 RKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVX 589
RKEAESCDC QG G KIREEYPDRIM T+SVVPSPKVSDTV
Sbjct: 121 RKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVV 180
Query: 590 EXYNATLSVHXLXEN 634
E YNATLSVH L EN
Sbjct: 181 EPYNATLSVHQLVEN 195
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 293 bits (720), Expect = 5e-80
Identities = 143/195 (73%), Positives = 153/195 (78%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 230 APRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVV 409
LEPGTMDSVRSG GQ+FRPDNFVFGQSGAGNNWAKG YTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 410 RKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVX 589
RKEAE CDC QG G KIREEYPDRIM+++SVVPSPKVSDTV
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVV 180
Query: 590 EXYNATLSVHXLXEN 634
E YNATLSVH L EN
Sbjct: 181 EPYNATLSVHQLVEN 195
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 291 bits (715), Expect = 2e-79
Identities = 147/196 (75%), Positives = 154/196 (78%), Gaps = 1/196 (0%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA G
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEA-GSNKY 59
Query: 230 APRHHR-RLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDV 406
PR LEPGTMDSVRSG GQ+FRPDN+VFGQSGAGNNWAKG YTEGAELVD+VLDV
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 407 VRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTV 586
VRKEAES DC QG G KIREEYPDRIMNT+SVVPSPKVSDTV
Sbjct: 120 VRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTV 179
Query: 587 XEXYNATLSVHXLXEN 634
E YNATLSVH L EN
Sbjct: 180 VEPYNATLSVHQLVEN 195
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 291 bits (715), Expect = 2e-79
Identities = 147/196 (75%), Positives = 154/196 (78%), Gaps = 1/196 (0%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA G
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEA-GSNKY 59
Query: 230 APRHHR-RLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDV 406
PR LEPGTMDSVRSG GQ+FRPDN+VFGQSGAGNNWAKG YTEGAELVD+VLDV
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 407 VRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTV 586
VRKEAES DC QG G KIREEYPDRIMNT+SVVPSPKVSDTV
Sbjct: 120 VRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTV 179
Query: 587 XEXYNATLSVHXLXEN 634
E YNATLSVH L EN
Sbjct: 180 VEPYNATLSVHQLVEN 195
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 285 bits (698), Expect = 2e-77
Identities = 137/195 (70%), Positives = 152/195 (77%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ G+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 230 APRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVV 409
LEPGTMDSVRSG GQ+FRPDNFVFGQSGAGNNWAKG YTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 410 RKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVX 589
RKEAE CDC QG G KIREEYPDRIM+++SVVPSPKVSDTV
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVV 180
Query: 590 EXYNATLSVHXLXEN 634
E YNATLSVH L EN
Sbjct: 181 EPYNATLSVHQLVEN 195
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 284 bits (697), Expect = 3e-77
Identities = 137/195 (70%), Positives = 152/195 (77%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ G+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 230 APRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVV 409
LEPGTMDSVRSG GQ+FRPDNFVFGQSGAGNNWAKG YTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 410 RKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVX 589
RKEAE CDC QG G KIREE+PDRIM+++SVVPSPKVSDTV
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVV 180
Query: 590 EXYNATLSVHXLXEN 634
E YNATLSVH L EN
Sbjct: 181 EPYNATLSVHQLVEN 195
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 191 bits (466), Expect = 3e-49
Identities = 94/195 (48%), Positives = 126/195 (64%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G +
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 230 APRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVV 409
L+P +++ VRS G++F P+N V G+SGAGNNW++G Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 410 RKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVX 589
R+EAE+ D +G G K+REEY D+ ++T S++PS KVSDTV
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVV 180
Query: 590 EXYNATLSVHXLXEN 634
E YNA LS+ L +N
Sbjct: 181 EPYNAILSMPHLMDN 195
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 191 bits (466), Expect = 3e-49
Identities = 94/195 (48%), Positives = 126/195 (64%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G +
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 230 APRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVV 409
L+P +++ VRS G++F P+N V G+SGAGNNW++G Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 410 RKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVX 589
R+EAE+ D +G G K+REEY D+ ++T S++PS KVSDTV
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVV 180
Query: 590 EXYNATLSVHXLXEN 634
E YNA LS+ L +N
Sbjct: 181 EPYNAILSMPHLMDN 195
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 123 bits (296), Expect = 1e-28
Identities = 63/195 (32%), Positives = 99/195 (50%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 230 APRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVV 409
LEP +D +R+GT ++F P+ + G+ A NN+A+G YT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 410 RKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVX 589
R+ A++C QG + ++ +Y + +S+ P+P+VS V
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 590 EXYNATLSVHXLXEN 634
E YN+ L+ H E+
Sbjct: 181 EPYNSILTTHTTLEH 195
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 121 bits (291), Expect = 5e-28
Identities = 63/195 (32%), Positives = 100/195 (51%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 230 APRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVV 409
LEP +D +R+GT ++F P+ + G+ A NN+A+G YT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 410 RKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVX 589
R+ A++C QG + ++ +Y + +S+ P+P+VS V
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 590 EXYNATLSVHXLXEN 634
E YN+ L+ H E+
Sbjct: 181 EPYNSILTTHTTLEH 195
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 121 bits (291), Expect = 5e-28
Identities = 62/195 (31%), Positives = 98/195 (50%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 230 APRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVV 409
LEP +D +R+GT ++F P+ + G+ A NN+A+G YT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 410 RKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVX 589
R+ A++C QG + ++ +Y + +S+ P+P+V V
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVV 180
Query: 590 EXYNATLSVHXLXEN 634
E YN+ L+ H E+
Sbjct: 181 EPYNSILTTHTTLEH 195
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 121 bits (291), Expect = 5e-28
Identities = 63/195 (32%), Positives = 100/195 (51%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 230 APRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVV 409
LEP +D +R+GT ++F P+ + G+ A NN+A+G YT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 410 RKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVX 589
R+ A++C QG + ++ +Y + +S+ P+P+VS V
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 590 EXYNATLSVHXLXEN 634
E YN+ L+ H E+
Sbjct: 181 EPYNSILTTHTTLEH 195
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 120 bits (289), Expect = 9e-28
Identities = 66/195 (33%), Positives = 103/195 (52%), Gaps = 2/195 (1%)
Frame = +2
Query: 53 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGQVR 229
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ G+
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGK-H 64
Query: 230 APRH-HRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDV 406
PR + LEP +D +R+G G +F PD + G+ A NN+A+G YT G EL+D VLD
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 407 VRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTV 586
+RK+ E+C+ QG + ++ E+ + +SV P+P+VS +V
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSV 184
Query: 587 XEXYNATLSVHXLXE 631
E YN+ L+ H E
Sbjct: 185 VEPYNSILTTHTTLE 199
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 119 bits (286), Expect = 2e-27
Identities = 68/198 (34%), Positives = 102/198 (51%), Gaps = 3/198 (1%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGQ 223
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E G+
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 224 VRAPRH-HRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVL 400
PR LEP +D VR+GT ++F P+ + G+ A NN+A+G YT G EL+D V+
Sbjct: 61 -HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVM 119
Query: 401 DVVRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSD 580
D VR+ E C QG + ++ +Y + +S+ P+P++S
Sbjct: 120 DRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQIST 179
Query: 581 TVXEXYNATLSVHXLXEN 634
++ E YN+ L+ H E+
Sbjct: 180 SMVEPYNSLLTTHTTLEH 197
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 116 bits (280), Expect = 1e-26
Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 4/198 (2%)
Frame = +2
Query: 53 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGQ 223
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GG+
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 224 VRAPRH-HRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVL 400
PR LEP +D VR+GT +F P+ + G+ A N +A+G YT G E++D V+
Sbjct: 67 -HVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVM 125
Query: 401 DVVRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSD 580
D V++ AE+C+ QG + ++ EY + +++ P+P+VS
Sbjct: 126 DRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVST 185
Query: 581 TVXEXYNATLSVHXLXEN 634
++ E YN+ L H E+
Sbjct: 186 SMVEPYNSILMTHTTLEH 203
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 115 bits (276), Expect = 3e-26
Identities = 59/195 (30%), Positives = 97/195 (49%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 230 APRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVV 409
LEP +D +R+G ++F P+ + G+ A NN+A+G YT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 410 RKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVX 589
R+ A++C QG + ++ +Y + +S+ P+P+VS V
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 590 EXYNATLSVHXLXEN 634
E YN+ L+ H E+
Sbjct: 181 EPYNSILTTHTTLEH 195
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 115 bits (276), Expect = 3e-26
Identities = 59/195 (30%), Positives = 97/195 (49%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 230 APRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVV 409
LEP +D +R+G ++F P+ + G+ A NN+A+G YT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 410 RKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVX 589
R+ A++C QG + ++ +Y + +S+ P+P+VS V
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 590 EXYNATLSVHXLXEN 634
E YN+ L+ H E+
Sbjct: 181 EPYNSILTTHTTLEH 195
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 114 bits (275), Expect = 4e-26
Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 3/198 (1%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQ 223
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 224 VRAPRHHR-RLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVL 400
PR LEP +D +R+GT +F P+ + G+ A NN+A+G YT G E++D L
Sbjct: 61 -HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTL 119
Query: 401 DVVRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSD 580
D +R+ A++C QG + ++ +Y + +S+ P+P+VS
Sbjct: 120 DRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVST 179
Query: 581 TVXEXYNATLSVHXLXEN 634
V E YN+ L+ H E+
Sbjct: 180 AVVEPYNSILTTHTTLEH 197
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 114 bits (275), Expect = 4e-26
Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 3/198 (1%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQ 223
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 224 VRAPRHHR-RLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVL 400
PR LEP +D +R+GT +F P+ + G+ A NN+A+G YT G E++D L
Sbjct: 61 -HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTL 119
Query: 401 DVVRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSD 580
D +R+ A++C QG + ++ +Y + +S+ P+P+VS
Sbjct: 120 DRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVST 179
Query: 581 TVXEXYNATLSVHXLXEN 634
V E YN+ L+ H E+
Sbjct: 180 AVVEPYNSILTTHTTLEH 197
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 114 bits (275), Expect = 4e-26
Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 3/198 (1%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQ 223
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 224 VRAPRHHR-RLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVL 400
PR LEP +D +R+GT +F P+ + G+ A NN+A+G YT G E++D L
Sbjct: 61 -HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTL 119
Query: 401 DVVRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSD 580
D +R+ A++C QG + ++ +Y + +S+ P+P+VS
Sbjct: 120 DRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVST 179
Query: 581 TVXEXYNATLSVHXLXEN 634
V E YN+ L+ H E+
Sbjct: 180 AVVEPYNSILTTHTTLEH 197
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 112 bits (270), Expect = 2e-25
Identities = 63/197 (31%), Positives = 99/197 (50%), Gaps = 3/197 (1%)
Frame = +2
Query: 53 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQV 226
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR- 59
Query: 227 RAPRHHR-RLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLD 403
PR LEP +D +R+GT +F P+ + G+ A NN+A+G YT G E++D LD
Sbjct: 60 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 119
Query: 404 VVRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDT 583
+R+ A++C QG + ++ +Y + +S+ P+P+VS
Sbjct: 120 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 179
Query: 584 VXEXYNATLSVHXLXEN 634
V E YN+ L+ H E+
Sbjct: 180 VVEPYNSILTTHTTLEH 196
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 111 bits (267), Expect = 4e-25
Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 3/200 (1%)
Frame = +2
Query: 44 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASG 217
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L ++ N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 218 GQVRAPRHHR-RLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDS 394
G+ PR LEP +D +R+GT +F P+ + G+ A NN+A+G YT G E++D
Sbjct: 64 GK-HVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDV 122
Query: 395 VLDVVRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKV 574
V+D VR+ E+C QG + ++ +Y + + + P+P+V
Sbjct: 123 VMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQV 182
Query: 575 SDTVXEXYNATLSVHXLXEN 634
S ++ E YN+ L+ H E+
Sbjct: 183 STSMVEPYNSILTTHTTLEH 202
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 110 bits (264), Expect = 9e-25
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 1/196 (0%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGR-H 58
Query: 230 APRH-HRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDV 406
PR LEP +D +R+G ++F P+ + G+ A NN+A+G YT G E++D+ LD
Sbjct: 59 VPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDR 118
Query: 407 VRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTV 586
+R+ A +C+ QG + ++ EY + +S+ P+P++S +V
Sbjct: 119 IRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSV 178
Query: 587 XEXYNATLSVHXLXEN 634
E YN+ L+ H E+
Sbjct: 179 VEPYNSILTTHTTLEH 194
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 95.5 bits (227), Expect = 3e-20
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 5/197 (2%)
Frame = +2
Query: 59 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRAPR 238
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y V PR
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFYQADDDHYV--PR 64
Query: 239 HHR-RLEPGTMDS-VRSGTLGQIFRPDNFVFGQ--SGAGNNWAKGXYTEGAELVDSVLDV 406
LEP ++ ++S +F DN GAGNNWA G Y +G E+ + ++D+
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 407 VRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVS-DT 583
+ +EAE+ + G+ G ++RE +P +++ TYSV + S D
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 584 VXEXYNATLSVHXLXEN 634
V YN LS+ L EN
Sbjct: 184 VVHPYNWVLSMQRLIEN 200
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 95.5 bits (227), Expect = 3e-20
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 5/197 (2%)
Frame = +2
Query: 59 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRAPR 238
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y V PR
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFYQADDDHYV--PR 64
Query: 239 HHR-RLEPGTMDS-VRSGTLGQIFRPDNFVFGQ--SGAGNNWAKGXYTEGAELVDSVLDV 406
LEP ++ ++S +F DN GAGNNWA G Y +G E+ + ++D+
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 407 VRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVS-DT 583
+ +EAE+ + G+ G ++RE +P +++ TYSV + S D
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 584 VXEXYNATLSVHXLXEN 634
V YN LS+ L EN
Sbjct: 184 VVHPYNWVLSMQRLIEN 200
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 94.3 bits (224), Expect = 7e-20
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 4/173 (2%)
Frame = +2
Query: 128 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGQVRAPRH-HRRLEPGTMDSVRSGTLG 295
EHGI P G YH + D + E IN ++ E +GG+ PR LEP +D VR+GT
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK-HVPRCLFVDLEPTVVDEVRTGTYR 62
Query: 296 QIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVVRKEAESCDCXQGLXSDTLARRR 475
+F P+ + G+ A N +A+G YT G E++D V+D V++ AE+C+ QG
Sbjct: 63 SLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGG 122
Query: 476 HRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVXEXYNATLSVHXLXEN 634
+ ++ EY + +++ P+P+VS ++ E YN+ L H E+
Sbjct: 123 TGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEH 175
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 31.1 bits (67), Expect = 0.69
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -1
Query: 411 RTTSKTESTSSAPSVXCPLAQLLPAPDCPKTKLSGRKICPKVPERTESMVPGS 253
+ T + T SAP + P P+P+ KT P+VPE E + PG+
Sbjct: 475 KQTQPAQPTPSAPKI--PEGPAQPSPNAVKTSYGSSPAAPRVPEMIE-VAPGN 524
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -1
Query: 432 SHDSASFRTTSKTESTSSAPSVXCPLAQLLPAPDCP 325
S A R + + S SS+PS CP LLP P CP
Sbjct: 294 SDGRAGSRISLASTSASSSPSDPCPSPPLLP-PVCP 328
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 6.4
Identities = 30/95 (31%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = -1
Query: 411 RTTSKTESTSSAPSVXCPLAQLLPAPDCPKTKLSGRKICPKVPER--TESMVPGSSRR*W 238
R S ++S S AP ++ PAP + S K P P+R + S P + RR
Sbjct: 319 RRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRSKSPPARRRRS 378
Query: 237 RGARTXPPEASL*YTLMRSNCKSESPW*APVGSMP 133
A PP RS KS SP AP +P
Sbjct: 379 PSASKSPPAP----RRRRSPSKSRSP--APKREIP 407
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,713,665
Number of Sequences: 27780
Number of extensions: 245389
Number of successful extensions: 839
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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