Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0620
         (533 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml prot...   169   3e-42
U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal prot...   169   3e-42
U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal prot...   169   3e-42
AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p pro...   169   3e-42
AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA...   169   3e-42
BT029651-1|ABL75710.1|   96|Drosophila melanogaster IP17231p pro...    28   9.2  
AE013599-325|AAF59274.2| 1307|Drosophila melanogaster CG11101-PA...    28   9.2  

>X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml protein
           S2 protein.
          Length = 267

 Score =  169 bits (410), Expect = 3e-42
 Identities = 80/84 (95%), Positives = 81/84 (96%)
 Frame = +2

Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 436
           FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI
Sbjct: 79  FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138

Query: 437 ILAKLSVLPVRRGYWGNKIGKXHT 508
           ILAKLSV+PVRRGYWGNKIGK HT
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHT 162



 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 36/41 (87%), Positives = 37/41 (90%)
 Frame = +3

Query: 132 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEII
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEII 77


>U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score =  169 bits (410), Expect = 3e-42
 Identities = 80/84 (95%), Positives = 81/84 (96%)
 Frame = +2

Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 436
           FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI
Sbjct: 79  FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138

Query: 437 ILAKLSVLPVRRGYWGNKIGKXHT 508
           ILAKLSV+PVRRGYWGNKIGK HT
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHT 162



 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 36/41 (87%), Positives = 37/41 (90%)
 Frame = +3

Query: 132 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEII
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEII 77


>U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score =  169 bits (410), Expect = 3e-42
 Identities = 80/84 (95%), Positives = 81/84 (96%)
 Frame = +2

Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 436
           FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI
Sbjct: 79  FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138

Query: 437 ILAKLSVLPVRRGYWGNKIGKXHT 508
           ILAKLSV+PVRRGYWGNKIGK HT
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHT 162



 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 36/41 (87%), Positives = 37/41 (90%)
 Frame = +3

Query: 132 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEII
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEII 77


>AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p
           protein.
          Length = 267

 Score =  169 bits (410), Expect = 3e-42
 Identities = 80/84 (95%), Positives = 81/84 (96%)
 Frame = +2

Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 436
           FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI
Sbjct: 79  FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138

Query: 437 ILAKLSVLPVRRGYWGNKIGKXHT 508
           ILAKLSV+PVRRGYWGNKIGK HT
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHT 162



 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 36/41 (87%), Positives = 37/41 (90%)
 Frame = +3

Query: 132 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEII
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEII 77


>AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA
           protein.
          Length = 267

 Score =  169 bits (410), Expect = 3e-42
 Identities = 80/84 (95%), Positives = 81/84 (96%)
 Frame = +2

Query: 257 FFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 436
           FFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI
Sbjct: 79  FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 138

Query: 437 ILAKLSVLPVRRGYWGNKIGKXHT 508
           ILAKLSV+PVRRGYWGNKIGK HT
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHT 162



 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 36/41 (87%), Positives = 37/41 (90%)
 Frame = +3

Query: 132 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEII 254
           KED KEWVPVTKLGRLVREGKI  LE IYL+SLPIKEFEII
Sbjct: 37  KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEII 77


>BT029651-1|ABL75710.1|   96|Drosophila melanogaster IP17231p
           protein.
          Length = 96

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
 Frame = +2

Query: 380 IGLGVKCSKEVATAIRGAI---ILAKLSVLPVRRGYWGNKIGKXHTSLARSPA 529
           IG+   C K V  A + A+   ILAK   +P R G  G KI +      R  A
Sbjct: 31  IGINFLCGKTVRKAGKYAVPIGILAKCICMPARNGRSGEKIQQVDAHATRRNA 83


>AE013599-325|AAF59274.2| 1307|Drosophila melanogaster CG11101-PA
           protein.
          Length = 1307

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 149 VGSCHQTRPSCSRRKNRQTREHLLVFFTNQRI 244
           V SCH  RP  SRRK+R+    ++ F    R+
Sbjct: 816 VSSCH-CRPGYSRRKHREPCRRVISFHLGMRV 846


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,363,143
Number of Sequences: 53049
Number of extensions: 486788
Number of successful extensions: 1903
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1741
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)