Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0619
         (770 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   3.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   6.2  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 209 GSWLPWTMTTTGSDRVQTWKTSSPPP 132
           G W+P   T+T + R  T  T+  PP
Sbjct: 434 GQWVPEKSTST-TQRTTTVSTTEAPP 458


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -3

Query: 309 SPRAGPRSPCRGQRRAPCRGT 247
           SP   PR P      +PCR +
Sbjct: 914 SPLTSPRQPAETHAGSPCRNS 934


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 308 DPQPQVQLGHGRVSLGGQ 361
           D +P VQ GH  + LGG+
Sbjct: 492 DYRPWVQHGHQELVLGGE 509


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,833
Number of Sequences: 336
Number of extensions: 3295
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)