Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0619
(770 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1518 - 34129542-34130001,34130567-34130652 32 0.58
02_05_1071 - 33876061-33877308,33877593-33877898 32 0.58
04_04_1247 - 32043776-32043880,32044296-32044505,32044595-320451... 31 0.77
01_01_1092 - 8593414-8593776,8597750-8597931,8598080-8598152 31 0.77
03_02_0689 - 10423661-10424343,10425580-10425628 31 1.3
12_01_0150 + 1155658-1156087,1156319-1156383,1156506-1156569,115... 30 1.8
09_04_0600 + 18883094-18883393,18883606-18883755,18883851-188841... 30 1.8
11_04_0097 + 13448740-13450725 30 2.4
04_04_1171 - 31455136-31455482,31455805-31458982 30 2.4
04_04_1495 - 33984225-33985295,33986107-33986238 29 3.1
03_05_0510 + 25039408-25039455,25040627-25040641,25040832-250409... 29 3.1
09_06_0198 - 21496692-21496991,21497111-21497258,21497341-214975... 29 4.1
12_01_0470 + 3667724-3668112,3668196-3668990,3669662-3669791 29 5.4
11_01_0700 + 5764149-5764979 29 5.4
08_01_0087 + 630355-630403,630502-630699,631858-631943,632238-63... 29 5.4
07_03_0910 - 22519006-22519159,22519300-22519355,22519433-225197... 29 5.4
04_04_0422 + 25098612-25099025,25099500-25099633,25099817-251000... 29 5.4
12_02_0364 - 18020249-18020737,18021075-18021502,18021563-180216... 28 7.2
04_04_0007 + 22119477-22120004 28 7.2
11_05_0084 + 18962892-18963383 28 9.5
11_01_0360 - 2742955-2743072,2743451-2743597,2743682-2743773,274... 28 9.5
11_01_0154 + 1281434-1281725,1281923-1281987,1282112-1282175,128... 28 9.5
10_07_0044 + 12319382-12319532,12319978-12320163,12320247-123203... 28 9.5
03_01_0646 + 4742398-4742994,4743681-4744085 28 9.5
>04_04_1518 - 34129542-34130001,34130567-34130652
Length = 181
Score = 31.9 bits (69), Expect = 0.58
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 108 AVPVAVQRGRRGARLPGLDPVASGCGHSPRQPGAPRVGHRHVGQRLQS-PGRVPFAVPDK 284
++ + + RGRR + A G G PR +PR H H L S P R P +P +
Sbjct: 75 SIQLLIHRGRRPLAADVVSSGAGGGGADPRGSPSPRRHHPHQASPLVSIPTRPPCRIPHR 134
>02_05_1071 - 33876061-33877308,33877593-33877898
Length = 517
Score = 31.9 bits (69), Expect = 0.58
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = +3
Query: 564 ASYRRSKL-RICCPSVRPGPS--CCGSSDSELGGITIAWTGDGNEVFS-CSLHVARPHAA 731
A RRS+L + + RP P CC SS S T GDG ++ S C L + R
Sbjct: 3 AVVRRSRLLALLVGASRPNPRPFCCSSSSSSAPPATAREDGDGGDLLSRCLLRIPRKSGR 62
Query: 732 LAGGPRVRTY 761
A V +
Sbjct: 63 AAAAAAVERW 72
>04_04_1247 - 32043776-32043880,32044296-32044505,32044595-32045101,
32045362-32045583,32046054-32046184,32046737-32047745,
32047830-32047904,32047995-32048066,32048153-32048328,
32048494-32048646,32048739-32049234
Length = 1051
Score = 31.5 bits (68), Expect = 0.77
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Frame = +3
Query: 207 APRVGHRHVGQRLQSPGRVPFAVPDKVTWGQLAETLSLKFSSATGGSLSEDNLRFLAEKI 386
+P G + Q + SPG + F + DK+ G A T S S GS S +++ KI
Sbjct: 811 SPSCGKKLSAQTVFSPGVLRFCIADKLESG--ATTSS---SVEADGSPSICESSYISSKI 865
Query: 387 FRTSLPLNTMELNAMAVSWTQFCK----DALPERNFTFWEW 497
T+ LN++ +N A++W+ + + P + F +W
Sbjct: 866 RATTDILNSI-VNTPALTWSDTMESSPSEVAPSKAIVFSQW 905
>01_01_1092 - 8593414-8593776,8597750-8597931,8598080-8598152
Length = 205
Score = 31.5 bits (68), Expect = 0.77
Identities = 24/54 (44%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 393 TSLPLNTMELN-AMA-VSWTQFCKDALPERNFTFWEWFYMVSRSPGTTCGPCGA 548
T LP+ LN A+A V+ D PE T E+ S SPGTTCGP GA
Sbjct: 124 TDLPIAPYPLNYAVAPVAPPSSSSDLRPEYLLTK-EFSANQSASPGTTCGPAGA 176
>03_02_0689 - 10423661-10424343,10425580-10425628
Length = 243
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 123 VQRGRRGARLPGLDPVASGCGHSPRQPGAPRVGHRH 230
++RG R A LPG P + PR+ G P G RH
Sbjct: 122 LRRGWRAACLPGEQPQVADDVLCPRRTGIPESGRRH 157
>12_01_0150 +
1155658-1156087,1156319-1156383,1156506-1156569,
1156988-1157115
Length = 228
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 225 RHVGQRLQSPGRVPFAVPDKVTWGQLAETLSLKFSSATG 341
RH+G R+ PG A VT G++ E + S ATG
Sbjct: 149 RHIGYRVARPGGFQIASEAAVTVGRVPEQADIVLSVATG 187
>09_04_0600 +
18883094-18883393,18883606-18883755,18883851-18884142,
18884697-18884858,18884958-18885021,18887573-18888080
Length = 491
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +1
Query: 532 ADPVVRPLNNGLHTEEAS*GYAVQVSARDLPAAVLRTPS---WEGS 660
ADP RP + + TE ++ A ++ AR AVLR PS W+GS
Sbjct: 405 ADPAARPWSIRMPTEHSAYCIADRLMARIALLAVLRAPSNDLWKGS 450
>11_04_0097 + 13448740-13450725
Length = 661
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +3
Query: 99 ADAAVPV--AVQRGRRGARLPGLDPVASGCGHSPRQPGAPRVGHRHVGQRLQSP 254
AD A P A +R RR RL P A G R PGAPR +L P
Sbjct: 41 ADQATPTDAAAERRRRKRRLRVEPPSARGGPAPQRAPGAPRPASNPNAPKLPEP 94
>04_04_1171 - 31455136-31455482,31455805-31458982
Length = 1174
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -2
Query: 520 GDLDTM*NHSQNVKFLSGS--ASLQNWVQLTAIAFSSMVFSGRLVLNIFSAKNLR 362
G+L ++ S + L+G+ ASL N V LT + S SG L +I S +NLR
Sbjct: 326 GELPSLQRLSLHANRLAGTVPASLTNLVNLTILELSENHLSGPLPASIGSLRNLR 380
>04_04_1495 - 33984225-33985295,33986107-33986238
Length = 400
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 722 RSRDVKAAAEYFVAVSGPSDGDPSQLGVRRTAAGRSRADTW 600
R+R++K F+A G S GDP+ G G D W
Sbjct: 236 RAREMKRGGAMFLACLGRSSGDPADQGGAGLLFGTHFQDAW 276
>03_05_0510 + 25039408-25039455,25040627-25040641,25040832-25040991,
25041116-25041192,25041324-25042528,25042537-25042621,
25043068-25043130,25043207-25043263,25043299-25043361,
25043560-25043643,25043730-25044320,25044535-25044663
Length = 858
Score = 29.5 bits (63), Expect = 3.1
Identities = 37/128 (28%), Positives = 50/128 (39%)
Frame = +3
Query: 165 PVASGCGHSPRQPGAPRVGHRHVGQRLQSPGRVPFAVPDKVTWGQLAETLSLKFSSATGG 344
PVASG PR P +G + ++P V A P L E ++ + T
Sbjct: 715 PVASGPEQLPRSSSCPSIGPGGLPPSSRAPAEVVVASP-------LDEHVAFRGGFNTPP 767
Query: 345 SLSEDNLRFLAEKIFRTSLPLNTMELNAMAVSWTQFCKDALPERNFTFWEWFYMVSRSPG 524
S S N A+ LP T L A+ F AL NF+ ++ S SP
Sbjct: 768 SASSTNAAAAAK---LPPLPSPTSPLQTRALFAAGFTVPAL--HNFSGLTLRHVDSSSPS 822
Query: 525 TTCGPCGA 548
+ PCGA
Sbjct: 823 S--APCGA 828
>09_06_0198 - 21496692-21496991,21497111-21497258,21497341-21497578,
21497679-21497889,21497977-21498170,21498263-21498364,
21498525-21499879,21501193-21501494,21501600-21501750,
21501838-21502102,21502155-21502362,21502467-21502660,
21502749-21502850,21503481-21503680,21504010-21504846,
21505806-21506107,21506209-21506359,21506447-21506684,
21506764-21506971,21507078-21507271,21507322-21507462,
21513484-21514811,21515923-21516227,21516331-21516481,
21516570-21516807,21516881-21517088,21517197-21517366,
21517451-21517549,21517708-21519029,21521601-21521683
Length = 3314
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 282 KVTWGQLAETLSLKFSSATGGSLSEDNLRFLAEKIFRTSLPL 407
+ TWG+ ETL L+ +++ GS N+ +A I ++L L
Sbjct: 2898 QTTWGRAGETLYLRVPASSTGSRGRGNVVKIAVPILASALVL 2939
>12_01_0470 + 3667724-3668112,3668196-3668990,3669662-3669791
Length = 437
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = -2
Query: 343 PPVAEL-NLRLRVSASWPQVTLS 278
PP EL N+ LR+ A+WPQV L+
Sbjct: 114 PPCTELDNVLLRMIAAWPQVVLA 136
>11_01_0700 + 5764149-5764979
Length = 276
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +3
Query: 120 AVQRGRRGARLPGLDPVASGCGHSP-RQPGAPRVGHR 227
A +RG RG+R G G H P QP P V HR
Sbjct: 204 AARRGGRGSRGDGAGEGGGGGNHLPWLQPRGPLVAHR 240
>08_01_0087 +
630355-630403,630502-630699,631858-631943,632238-632946,
633029-633194,633459-633934,634023-634873,635078-635987,
636597-636784
Length = 1210
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 517 HQGLPADPVVRPLNNGLHTEEAS*GYAVQVSARD 618
HQGLP D + N H ++ + ++VS RD
Sbjct: 540 HQGLPKDKITMEAANTRHGDDPNCNSGIRVSVRD 573
>07_03_0910 -
22519006-22519159,22519300-22519355,22519433-22519702,
22519808-22519986,22520146-22520374,22520985-22521180,
22521728-22521818,22521921-22521975,22522812-22522902,
22523366-22523424,22524000-22524050
Length = 476
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/93 (21%), Positives = 35/93 (37%)
Frame = +3
Query: 12 DSSASLQEHAAAQDQTXXXXXXXXXXXXXADAAVPVAVQRGRRGARLPGLDPVASGCGHS 191
+ S+ + +A Q Q A + A++ G +PG + +G G +
Sbjct: 316 EKSSMVSPYAVQQQQLAFMTPQQLALLSQQQALLMAALKAGNAPQMIPGNASLLNGNGSN 375
Query: 192 PRQPGAPRVGHRHVGQRLQSPGRVPFAVPDKVT 290
P G P ++ Q+PG P A + T
Sbjct: 376 PANGGLPSQSWTNLA--YQNPGLAPVAAQNGAT 406
>04_04_0422 +
25098612-25099025,25099500-25099633,25099817-25100067,
25100130-25100494
Length = 387
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 183 GHSPRQ---PGAPRVGHRHVGQRLQSPGRVPFAVPDKVTWGQLAETLSLKFSS 332
GH R PGA RVG H+G+ QS + +P G L E ++ +++
Sbjct: 150 GHQARLEGGPGAERVGEAHIGRPWQSMTYESYQMPGLGEGGTLQEGITSGYTA 202
>12_02_0364 -
18020249-18020737,18021075-18021502,18021563-18021649,
18022059-18022192,18023051-18023053,18023129-18023187,
18023429-18023887
Length = 552
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -1
Query: 254 GGLKALSHVTVAHPWGSWLPWTMTTTGSDRVQTWKT 147
G L+ + H+T +P +WLP T + +G+ R + T
Sbjct: 59 GYLEEVGHLTRLNPQDAWLPITESRSGNARYAAFHT 94
>04_04_0007 + 22119477-22120004
Length = 175
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/81 (29%), Positives = 32/81 (39%)
Frame = -1
Query: 746 RSASERSMRSRDVKAAAEYFVAVSGPSDGDPSQLGVRRTAAGRSRADTWTAYPQLASSV* 567
R+ + R + AAA A + S GD Q G R TAA + + P A+
Sbjct: 61 RNLARRGREAAASLAAAAAAAAAAAASSGDQQQQG-RTTAAAAAVLAGGESAPPAAARAA 119
Query: 566 SPLLSGRTTGSAGSPW*P*HH 504
+ L G AG P HH
Sbjct: 120 ADLDGAGVWGGAGMRGRPAHH 140
>11_05_0084 + 18962892-18963383
Length = 163
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +3
Query: 99 ADAAVPVAVQRGRRGARLPGLDPV--ASGCGHSPRQPGAPRVGHRHVGQ 239
ADAA+ ARL GL A GH R PGA RH +
Sbjct: 75 ADAAMAALRSAADGAARLVGLSRALDAVAAGHGGRSPGAGHGAPRHAAE 123
>11_01_0360 -
2742955-2743072,2743451-2743597,2743682-2743773,
2744408-2744507,2744590-2744790,2745254-2745459,
2745619-2746045,2746172-2746411,2746514-2746719,
2747081-2747176,2747348-2747521
Length = 668
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +3
Query: 282 KVTWGQLAETLSLKFSSATGGS-LSEDNL-RFLAEKIFRTSLPLNTMELNAMAVSW 443
+V W ++ +TLS++ + +TG S LS + R + ++ F+ S + EL+A W
Sbjct: 545 RVAWAKILQTLSIQGAGSTGSSDLSSSGVSRAMIKERFK-SFNMQFEELHAKQSQW 599
>11_01_0154 +
1281434-1281725,1281923-1281987,1282112-1282175,
1282303-1282449,1282583-1282677,1284358-1284465
Length = 256
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 225 RHVGQRLQSPGRVPFAVPDKVTWGQLAETLSLKFSSAT 338
RH+G R+ PG A VT G++ E + S AT
Sbjct: 103 RHIGYRVARPGGFQIASEAAVTVGRVPEQADIVLSVAT 140
>10_07_0044 +
12319382-12319532,12319978-12320163,12320247-12320396,
12320495-12320644,12320728-12321417,12321641-12322033,
12322073-12322546,12322634-12323974,12324042-12324388
Length = 1293
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 517 HQGLPADPVVRPLNNGLHTEEAS*GYAVQVSARD 618
HQGLP D + N H ++ ++VS RD
Sbjct: 710 HQGLPKDKITMKAANERHGDDPDCNSRIRVSVRD 743
>03_01_0646 + 4742398-4742994,4743681-4744085
Length = 333
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +3
Query: 495 WFYMVSRSPGTTCGPCGATA**WASYRRSKLRICCPSVRPGPSCCGSSDSELGGI 659
WFY++SR G C SYRR+ R+ VR S C S S G +
Sbjct: 281 WFYLLSRDAAGGGGNCD------DSYRRAWSRLLRRLVRESRSFCSLSISRHGNV 329
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,932,042
Number of Sequences: 37544
Number of extensions: 487873
Number of successful extensions: 1705
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1705
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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