Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0618
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    25   0.84 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.5  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   7.9  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.9  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 606 TYHRYKNVPSGQGHTGP 656
           +Y  + N P+G  HTGP
Sbjct: 40  SYQHHFNSPAGNAHTGP 56


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 687  QGDTEIIPSDLDP 649
            QGD + +PSD+DP
Sbjct: 2335 QGDGKYLPSDIDP 2347


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 23  CIYTPESLLK*CVDTHH 73
           C+  PESL+   VD HH
Sbjct: 121 CLAIPESLVIKLVDYHH 137


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 104 TVMTYPNHYLSDVYQ 60
           TV   PN YL+D Y+
Sbjct: 26  TVFDIPNDYLNDKYK 40


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = +3

Query: 447 QIKHKN*YEILLNNYERLAIFKSCE*KIK*LLAGNYRLGRMKNINTNTY 593
           ++ +K  + ++  +Y+R  IF +CE     LL  ++ L  M + N  T+
Sbjct: 113 KLDNKLKHMLIWKSYKRTQIFITCELFFVILLWISFFLNFMLHCNNTTW 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,442
Number of Sequences: 336
Number of extensions: 3155
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)