Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0616
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   2.3  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.3  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.0  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   9.1  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   9.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   9.1  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +2

Query: 191 HRQDHRGWRRFFQHFLQRDRSCKHVPR 271
           +R++ +GW+   +H L  ++    VPR
Sbjct: 120 YRENKQGWQNSIRHNLSLNKCFVKVPR 146


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -1

Query: 458 QRACGFCPKPNLRFPFQWCSDHGHSCW 378
           Q  C +   PN       C+D   SCW
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW 41


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +2

Query: 383 NYARGHYTIGKEIVDLVLDRIRKLADQCTG 472
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = -3

Query: 537 NKEVTPRAGTPPKEWKIRNPCRPVHWSASLRILSKTK 427
           N +  P    PP +W       P + S+ L++ + T+
Sbjct: 38  NNQALPPITYPPSDWNCPQYNAPPYMSSVLQLPTVTE 74


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = -3

Query: 537 NKEVTPRAGTPPKEWKIRNPCRPVHWSASLRILSKTK 427
           N +  P    PP +W       P + S+ L++ + T+
Sbjct: 29  NNQALPPITYPPSDWNCPQYNAPPYMSSVLQLPTVTE 65


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 204 IGGGDDSFNTFFSETGAASTY 266
           +GGGD S N+      A  TY
Sbjct: 112 LGGGDTSPNSALQRARADKTY 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,497
Number of Sequences: 336
Number of extensions: 3949
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)