Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0614
(697 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_1146 + 10756897-10757065,10763869-10765521,10765638-107659... 44 9e-05
07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,350... 44 9e-05
07_01_1149 + 10789733-10791209,10791326-10791588,10791745-107919... 44 2e-04
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234... 42 6e-04
03_06_0252 - 32656068-32656276,32656361-32656550,32656682-326567... 38 0.010
03_06_0253 - 32666152-32666360,32666443-32666632,32666764-326668... 37 0.013
07_03_1479 - 26832976-26833095,26833737-26833943,26834104-268342... 29 3.5
02_02_0111 - 6904318-6904767 29 4.7
07_03_0802 - 21614891-21615195,21615637-21615823,21615939-216161... 28 6.2
05_04_0158 + 18613265-18615304 28 6.2
11_04_0333 + 16474011-16475478,16475622-16475641 28 8.1
09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,504... 28 8.1
>07_01_1146 +
10756897-10757065,10763869-10765521,10765638-10765900,
10766057-10766266,10766818-10767036,10767379-10768344,
10768575-10768670,10768772-10768870,10769349-10769538,
10769623-10769855
Length = 1365
Score = 44.4 bits (100), Expect = 9e-05
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Frame = +1
Query: 256 DENLNLGAGLSLTETMDVF--ERWSTNEEYKYLL--QLREHVDLVAHVPVRNIGTLGGNL 423
D+ + +GA S++ T+++ E ST+ ++ +L EH+ VA VRN ++GGN+
Sbjct: 311 DKGIEIGAATSISRTIEILNQESESTSSPNGSVVFRKLAEHMSKVASPFVRNTASIGGNI 370
Query: 424 ALKNKHNEFPSDIFLLLETIGATVGI 501
L +K+ F SDI +L ATV +
Sbjct: 371 ILAHKY-PFRSDIATILLGAAATVNL 395
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +2
Query: 68 ASRRGRWYKAFTVQDIFXILRRE--GSNNYRLVAGNTGQGVYPIKTEPKIYIDISSIDRL 241
+S R WY ++ + ++ ++ ++V GNT GVY + YIDI+ I L
Sbjct: 245 SSPREGWYCPKNIKQYYKLVNSGLFSESSVKVVVGNTSTGVYKDQDLYDKYIDIAGIPEL 304
>07_01_0464 -
3504264-3504475,3504842-3505031,3505310-3505408,
3505561-3505653,3505926-3506891,3507267-3507485,
3508038-3508247,3508371-3508630,3508956-3510737,
3510796-3511009
Length = 1414
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/81 (27%), Positives = 48/81 (59%)
Frame = +1
Query: 259 ENLNLGAGLSLTETMDVFERWSTNEEYKYLLQLREHVDLVAHVPVRNIGTLGGNLALKNK 438
+ + +GA +S+++ +++ + + ++ +H++ VA VRN+ +LGGNL + +
Sbjct: 334 KGVGIGAAMSISQVIEILRGEGNSYKDVVFCKIADHMEKVASQFVRNMASLGGNLIMAQR 393
Query: 439 HNEFPSDIFLLLETIGATVGI 501
+EF SDI +L G+++ I
Sbjct: 394 -DEFASDIATVLLAAGSSLCI 413
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +2
Query: 86 WYKAFTVQDIFXILRREGSNN----YRLVAGNTGQGVYPIKTEPKIYIDISSIDRL 241
WY+ V++ + ++ S++ ++V GNT GVY YID+ +I L
Sbjct: 271 WYQPKNVEEYYKLIGSLSSSSDKSRTKVVVGNTSSGVYRDAELYDRYIDLRAIPEL 326
>07_01_1149 +
10789733-10791209,10791326-10791588,10791745-10791954,
10792398-10792475,10792505-10792705,10792768-10792908,
10794749-10795714,10797824-10797919,10798450-10798638,
10798849-10798956
Length = 1242
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Frame = +1
Query: 256 DENLNLGAGLSLTETMDVF----ERWSTNEEYKYLLQLREHVDLVAHVPVRNIGTLGGNL 423
D+ + +GA S++ T+++ E S+ +L EH+ VA VRN ++GGN+
Sbjct: 196 DKGIEIGAATSISRTIEILNQESELTSSPNGSVVFRKLAEHMSKVASPFVRNTASIGGNI 255
Query: 424 ALKNKHNEFPSDIFLLLETIGATVGI 501
L +K+ F SDI +L ATV +
Sbjct: 256 ILAHKY-PFRSDIATILLGAAATVNL 280
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 77 RGRWYKAFTVQDIFXILRRE--GSNNYRLVAGNTGQGVYPIKTEPKIYIDISSIDRL 241
R WY +++ + ++ ++ ++V GNT GVY + YIDI+ I L
Sbjct: 133 REGWYCPKSIKQYYKLVNSGLFSESSVKVVVGNTSTGVYKDQDLYDKYIDIAGIPEL 189
>10_01_0217 +
2337950-2338085,2340766-2342436,2342636-2342898,
2343027-2343236,2343436-2343654,2344038-2345000,
2345279-2345374,2345482-2345580,2345953-2346142,
2346594-2346823
Length = 1358
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/79 (30%), Positives = 44/79 (55%)
Frame = +1
Query: 265 LNLGAGLSLTETMDVFERWSTNEEYKYLLQLREHVDLVAHVPVRNIGTLGGNLALKNKHN 444
+ +GA +S+++ +++ S + ++ H+ VA VRN T+GGN+ + + +
Sbjct: 306 IEIGAAVSISKAIEILR--SDGGDAVVFRKIAYHLGKVASPFVRNTATIGGNIIMAQRMS 363
Query: 445 EFPSDIFLLLETIGATVGI 501
FPSDI +L G+TV I
Sbjct: 364 -FPSDIATVLLAAGSTVTI 381
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 80 GRWYKAFTVQDIFXILRRE--GSNNYRLVAGNTGQGVYPIKTEPKIYIDISSIDRL 241
G W+ ++++ + + ++VA NTG GVY + YI+IS I L
Sbjct: 241 GCWFHPRSIEEFHRLFECNLFDEMSVKIVASNTGSGVYKDQDLHDKYINISQIPEL 296
>03_06_0252 -
32656068-32656276,32656361-32656550,32656682-32656780,
32656917-32657012,32657200-32658153,32658476-32658694,
32658911-32659120,32659241-32659503,32659605-32661281,
32663639-32663792
Length = 1356
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/81 (28%), Positives = 45/81 (55%)
Frame = +1
Query: 259 ENLNLGAGLSLTETMDVFERWSTNEEYKYLLQLREHVDLVAHVPVRNIGTLGGNLALKNK 438
+ + +GA +S+++ +D+ ++ ++ +H+ VA VRN T+GGN+ + +
Sbjct: 313 KGVEIGAVVSISQAIDIL-----SDGGAVFRKIADHLSKVASPFVRNTATIGGNIIMAQR 367
Query: 439 HNEFPSDIFLLLETIGATVGI 501
+ F SDI +L G+TV I
Sbjct: 368 LS-FSSDIATVLLAAGSTVTI 387
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 86 WYKAFTVQDIFXILRRE--GSNNYRLVAGNTGQGVYPIKTEPKIYIDISSIDRL 241
W+ +V++ + + ++VA NTG GVY + YI+IS I L
Sbjct: 252 WFHPKSVEEFHRLFDSNLFDERSVKIVASNTGSGVYKDQDLHDKYINISQIPEL 305
>03_06_0253 -
32666152-32666360,32666443-32666632,32666764-32666862,
32666999-32667094,32667408-32668361,32668683-32668901,
32669282-32669491,32669617-32669879,32670041-32671717,
32672702-32672852
Length = 1355
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/81 (27%), Positives = 46/81 (56%)
Frame = +1
Query: 259 ENLNLGAGLSLTETMDVFERWSTNEEYKYLLQLREHVDLVAHVPVRNIGTLGGNLALKNK 438
+ + +GA +S+++ +++ ++ ++ +H+ VA V+N T+GGN+ + +
Sbjct: 312 KGVEIGAVVSISKAIEIL-----SDGGAVFRKIADHLSKVASSFVQNTATIGGNIIMAQR 366
Query: 439 HNEFPSDIFLLLETIGATVGI 501
+ FPSDI +L G+TV I
Sbjct: 367 LS-FPSDIATVLLAAGSTVTI 386
>07_03_1479 - 26832976-26833095,26833737-26833943,26834104-26834252,
26834330-26834732,26834840-26835118,26835285-26835716,
26836362-26836838,26837171-26837212,26837285-26837545,
26837637-26838938,26839146-26839575,26839643-26840046,
26840360-26840716,26840842-26841102,26841494-26842141,
26842231-26842452,26842547-26842768,26842860-26843009,
26843739-26844111,26844467-26844689,26845167-26845425,
26845585-26845920,26846013-26846999,26848395-26849624,
26849706-26849768,26849858-26849910,26849998-26850079,
26850520-26850588,26851070-26851129,26851205-26851267,
26851993-26852101,26852742-26852827,26853120-26853847,
26854613-26854676
Length = 3716
Score = 29.1 bits (62), Expect = 3.5
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +1
Query: 229 DRPTEGRALDENL-NLGAGLSLTE-----TMDVFERWSTNEEYKYLLQLREHVDLVAHVP 390
D+ T G ENL + G L+L + M V R ++++ L++++E ++ +
Sbjct: 2752 DKGTNGVGEAENLVSKGVELALEQWWQLPEMSVQSRMPLLQQFQQLVEVKESSKILLDIA 2811
Query: 391 VRNIGTLGGNLALKNKHNEFPSDIFLLLET 480
N G + A N HN F +D+ +LET
Sbjct: 2812 NGNKPASGNSGANSNHHNSF-ADLKDILET 2840
>02_02_0111 - 6904318-6904767
Length = 149
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = -3
Query: 545 ELRHAHIRNLHIVFIIPTVAPIVSSSKKISEGNSLCLFFKAKFPPRVPIFR 393
+ RH+H+ L +V I P AP+++ + + + C + + IFR
Sbjct: 59 QYRHSHVHALDMVVIGPPPAPLLNLTSLVGSTPAACQLLQDQRNENTEIFR 109
>07_03_0802 -
21614891-21615195,21615637-21615823,21615939-21616154,
21616669-21616872,21617336-21617569,21617670-21617763,
21618844-21618890,21619293-21619309,21620183-21620459
Length = 526
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/78 (28%), Positives = 32/78 (41%)
Frame = -3
Query: 512 IVFIIPTVAPIVSSSKKISEGNSLCLFFKAKFPPRVPIFRTGTCATKSTCSRSCSKYLYS 333
+V ++ VA + + K+I E L + K V I RT CSKYLY+
Sbjct: 18 VVVLVCVVATLATQPKQIHEIKDFLLTARRKDARSVRIKRTKDAVKFKV---RCSKYLYT 74
Query: 332 SFVDHLSKTSMVSVKLRP 279
V K + + L P
Sbjct: 75 LCVFDADKANKLKQSLPP 92
>05_04_0158 + 18613265-18615304
Length = 679
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 461 ISEGNSLCLFFKAKFPPRVPIFRTGTCATKSTCSRSC 351
+ +G LF PPR P+ R A ++C RSC
Sbjct: 303 LRKGKVASLFDPRVAPPRDPVTRRDLAALAASCVRSC 339
>11_04_0333 + 16474011-16475478,16475622-16475641
Length = 495
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 280 GLSLTETMDVFERWSTNEEYKYLLQLREHVDLVAHVPVRNIGTLGGNLALK 432
GLS +E DVF W+ E +L+++ + VA P+ G GG L K
Sbjct: 229 GLSNSEIADVFAEWNRGELESFLVEITADIFTVAD-PLDGSG--GGGLVDK 276
>09_02_0152 +
5040845-5041001,5042645-5042757,5043556-5043816,
5043954-5044058,5044726-5044791,5044882-5044999,
5045018-5045103,5045900-5046424,5046534-5047115,
5047203-5047385,5049326-5049392,5049685-5049791,
5049977-5050076,5050228-5050313,5050394-5050485,
5050591-5050705,5050792-5050983
Length = 984
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -3
Query: 257 SNARPSVGLSTICLCRSLAPFLLDKLLAP 171
SNARPS+ +ST L SL+ L+ K + P
Sbjct: 566 SNARPSLDISTSSLQSSLSSGLMAKTMPP 594
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,868,483
Number of Sequences: 37544
Number of extensions: 389961
Number of successful extensions: 1036
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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