Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0614
(697 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83116-1|CAB05559.2| 480|Caenorhabditis elegans Hypothetical pr... 31 1.0
AC006833-12|AAF60942.1| 218|Caenorhabditis elegans Enhancer of ... 31 1.0
AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of ... 31 1.0
Z73102-12|CAA97406.1| 430|Caenorhabditis elegans Hypothetical p... 29 3.2
U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical pr... 29 3.2
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 29 4.2
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 29 4.2
Z47357-9|CAI46580.1| 563|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z47357-8|CAA87425.3| 601|Caenorhabditis elegans Hypothetical pr... 28 5.5
U41557-8|AAA83308.2| 229|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF116529-1|AAD05570.1| 961|Caenorhabditis elegans synthetic mul... 28 5.5
AF000195-1|AAC24266.2| 961|Caenorhabditis elegans Abnormal cell... 28 5.5
Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical pr... 27 9.7
AC084197-38|AAU87807.1| 186|Caenorhabditis elegans Hypothetical... 27 9.7
>Z83116-1|CAB05559.2| 480|Caenorhabditis elegans Hypothetical
protein M01B2.1 protein.
Length = 480
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 304 DVFERWSTNEEYKYLLQLREHVDLVAHVPVRNI-GTLGGNLALKNKHNEFP 453
D+F+ ST++ Y + Q+ ++ +A PVR G G N K +EFP
Sbjct: 260 DIFDELSTSDLYSFAYQIANGMEYLAAKPVRFFWGKSGANFQFLKK-SEFP 309
>AC006833-12|AAF60942.1| 218|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform b protein.
Length = 218
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = -3
Query: 584 NIAYEIIFEIHFQELRHAHIRNLHIVFIIP-TVAPIVSSSKKISEGNSLCLFFKAKFPPR 408
N ++ ++ H L H + I+P + I++ K + + + FFK + P
Sbjct: 58 NSSHRLLLHFHTAHLDHTKFFSFKPAPILPKSTTSILNPIKNPDDFDRIFDFFKTEIAPL 117
Query: 407 VPIFRTGTCATKSTCSRS 354
P+ T + A CSRS
Sbjct: 118 FPLHSTVSQAPLPQCSRS 135
>AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform a protein.
Length = 262
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = -3
Query: 584 NIAYEIIFEIHFQELRHAHIRNLHIVFIIP-TVAPIVSSSKKISEGNSLCLFFKAKFPPR 408
N ++ ++ H L H + I+P + I++ K + + + FFK + P
Sbjct: 102 NSSHRLLLHFHTAHLDHTKFFSFKPAPILPKSTTSILNPIKNPDDFDRIFDFFKTEIAPL 161
Query: 407 VPIFRTGTCATKSTCSRS 354
P+ T + A CSRS
Sbjct: 162 FPLHSTVSQAPLPQCSRS 179
>Z73102-12|CAA97406.1| 430|Caenorhabditis elegans Hypothetical
protein B0035.11 protein.
Length = 430
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 498 NNKNDMKISDVSMSQFLKMDLKNNLIGDVKLPPLSANNLLRTYKIMPRAQNAHAIV 665
+N +K D +MS +L N I +V L PL++NNL Y P +A A++
Sbjct: 230 SNAKIVKWDDGTMSLYL-----GNEIFEVSLVPLNSNNLPHLYVKQPTLMSAQAVL 280
>U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical
protein C26E6.12 protein.
Length = 390
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 614 LKDIQDNAASPERTRHRQRRFL 679
LKD+QDN PE T+H ++RFL
Sbjct: 372 LKDVQDN---PENTKHVKKRFL 390
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying
defective protein 27,isoform a protein.
Length = 1129
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +3
Query: 453 FRYFLTAGNDWSDCRNNKNDMKISDVSMSQFLKMDLKNNLIGDVKLPPLSANNLLRT 623
+R + +GN D + N +++SD+ M + + ++ D L L+AN+++ T
Sbjct: 275 YRTYTLSGNHMLDSQKNARSLQVSDLLMDEAIIQLHRSGYKIDDALSELNANDIILT 331
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +3
Query: 453 FRYFLTAGNDWSDCRNNKNDMKISDVSMSQFLKMDLKNNLIGDVKLPPLSANNLLRT 623
+R + +GN D + N +++SD+ M + + ++ D L L+AN+++ T
Sbjct: 275 YRTYTLSGNHMLDSQKNARSLQVSDLLMDEAIIQLHRSGYKIDDALSELNANDIILT 331
>Z47357-9|CAI46580.1| 563|Caenorhabditis elegans Hypothetical
protein ZK1128.6b protein.
Length = 563
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -3
Query: 485 PIVSSSKKISEGNSLCLFFKAKF---PPRVPIFRTGTCATK 372
PIVSSS K GN+ ++F PP + + GT TK
Sbjct: 54 PIVSSSTKKENGNAAPFLKSSQFTDVPPTIRFYTKGTKVTK 94
>Z47357-8|CAA87425.3| 601|Caenorhabditis elegans Hypothetical
protein ZK1128.6a protein.
Length = 601
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -3
Query: 485 PIVSSSKKISEGNSLCLFFKAKF---PPRVPIFRTGTCATK 372
PIVSSS K GN+ ++F PP + + GT TK
Sbjct: 92 PIVSSSTKKENGNAAPFLKSSQFTDVPPTIRFYTKGTKVTK 132
>U41557-8|AAA83308.2| 229|Caenorhabditis elegans Hypothetical
protein C50F7.1a protein.
Length = 229
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = +2
Query: 86 WYK----AFTVQDIFXILRREGSNNYRLVAGNTGQGVY 187
WYK F ++ F I+ +EGS YRL T Q +Y
Sbjct: 3 WYKFKIVVFFSKNAFQIVWQEGSYGYRLCTSQTDQKLY 40
>AF116529-1|AAD05570.1| 961|Caenorhabditis elegans synthetic
multivulva protein LIN-35 Rb protein.
Length = 961
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +3
Query: 450 PFRYFLTAGNDWSDCRNNKNDMKISDVSMSQFLKMDLKNNLIGDVKLPPLSANNLLRTY 626
PF +F G DW+D N+ + +K + + L+ +L ++ + L RTY
Sbjct: 695 PFAHFQEFGEDWADKLNSYSPIKFTPIKKPDDLRDELGRPIVPQNQTSRTLRIFLKRTY 753
>AF000195-1|AAC24266.2| 961|Caenorhabditis elegans Abnormal cell
lineage protein 35 protein.
Length = 961
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +3
Query: 450 PFRYFLTAGNDWSDCRNNKNDMKISDVSMSQFLKMDLKNNLIGDVKLPPLSANNLLRTY 626
PF +F G DW+D N+ + +K + + L+ +L ++ + L RTY
Sbjct: 695 PFAHFQEFGEDWADKLNSYSPIKFTPIKKPDDLRDELGRPIVPQNQTSRTLRIFLKRTY 753
>Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical
protein F55B11.1 protein.
Length = 1358
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +1
Query: 256 DENLNLGAGLSLTETMDVFE----RWSTNEEYKYLLQLREHVDLVAHVPVRNIGTLGGNL 423
++ + +G G+SLT+ MD + + E+ L + E + A + VRN+ ++ GN+
Sbjct: 321 NDGVYMGTGMSLTD-MDNYSVQLMKDLPREQTAVLKHVHEMLHWFAGIHVRNVASVAGNI 379
Query: 424 A 426
A
Sbjct: 380 A 380
>AC084197-38|AAU87807.1| 186|Caenorhabditis elegans Hypothetical
protein Y73B6BL.43 protein.
Length = 186
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 514 ISFLLFRQSLQSFPAVRKYLKGI 446
I+F+LF+ SLQ P + K+L+ +
Sbjct: 133 IAFMLFKTSLQRLPIMEKHLENV 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,841,413
Number of Sequences: 27780
Number of extensions: 330917
Number of successful extensions: 1020
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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