Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0612
(735 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 70 1e-12
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 58 5e-09
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 58 5e-09
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 58 5e-09
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 58 6e-09
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 58 6e-09
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 55 5e-08
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 55 5e-08
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 55 5e-08
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 48 9e-06
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 39 0.004
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 39 0.004
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 39 0.004
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 38 0.007
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 38 0.007
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.010
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.010
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 37 0.013
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 36 0.039
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 36 0.039
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 36 0.039
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 36 0.039
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 35 0.052
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 35 0.052
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 35 0.069
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 33 0.28
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 32 0.48
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 32 0.48
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 32 0.48
Z68316-2|CAA92681.1| 352|Caenorhabditis elegans Hypothetical pr... 31 0.85
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 31 1.1
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 31 1.1
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 30 1.5
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 30 1.5
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 29 2.6
AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical... 29 2.6
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 29 4.5
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 29 4.5
AC006777-5|AAK72311.1| 247|Caenorhabditis elegans Hypothetical ... 29 4.5
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 28 6.0
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 6.0
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 28 6.0
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 6.0
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 28 6.0
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 6.0
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 6.0
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z30423-11|CAD27184.1| 237|Caenorhabditis elegans Hypothetical p... 28 7.9
AF039046-14|AAB94214.1| 388|Caenorhabditis elegans Prion-like-(... 28 7.9
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 70.1 bits (164), Expect = 1e-12
Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 30/111 (27%)
Frame = +2
Query: 248 QPPGHFARDCKEEAD------------RCYRCNGTGHIARECAQSPDE------------ 355
Q GHF+RDC + CY C G GH +R+C + E
Sbjct: 41 QETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGE 100
Query: 356 ------PSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGT 490
CYNC ++GHI+R C E G + + CY C ++GHISR+CP T
Sbjct: 101 GRSFGGQKCYNCGRSGHISRECTESG-SAEEKRCYQCQETGHISRDCPSQT 150
Score = 68.5 bits (160), Expect = 5e-12
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 17/82 (20%)
Frame = +2
Query: 287 ADR-CYRCNGTGHIARECAQSPDE---------PSCYNCNKTGHIARNCPEGGRESATQ- 433
+DR CY+C GHI+R C + +CYNC +TGH +R+CP+GG +
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRG 61
Query: 434 ------TCYNCNKSGHISRNCP 481
+CYNC GH SR+CP
Sbjct: 62 GGGGGGSCYNCGGRGHYSRDCP 83
Score = 68.5 bits (160), Expect = 5e-12
Identities = 46/127 (36%), Positives = 56/127 (44%), Gaps = 40/127 (31%)
Frame = +2
Query: 248 QPPGHFARDCKE-EAD----------RCYRCNGTGHIARECAQSPDEP----------SC 364
Q PGH +R+C E+D CY C TGH +R+C + SC
Sbjct: 10 QQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSC 69
Query: 365 YNCNKTGHIARNCP----EGG-----------RESATQTCYNCNKSGHISRNCPDG---- 487
YNC GH +R+CP EGG R Q CYNC +SGHISR C +
Sbjct: 70 YNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRECTESGSAE 129
Query: 488 TKTCYVC 508
K CY C
Sbjct: 130 EKRCYQC 136
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 135 SVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKC 248
S CY C TGHF+R+C +GG G C+ C
Sbjct: 35 STCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNC 72
Score = 37.1 bits (82), Expect = 0.013
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 431 QTCYNCNKSGHISRNCPDG 487
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 36.3 bits (80), Expect = 0.023
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKC 248
CY C R+GH +RECT+ G + + ++C++C
Sbjct: 109 CYNCGRSGHISRECTESG--------SAEEKRCYQC 136
Score = 31.9 bits (69), Expect = 0.48
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQG 191
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 8/46 (17%)
Frame = +3
Query: 141 CYKCNRTGHFARECT-------QGGVVSR-DSGFNRQREKCFKCNR 254
CY C GH++R+C GG R G + +KC+ C R
Sbjct: 69 CYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGR 114
Score = 29.1 bits (62), Expect = 3.4
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 141 CYKCNRTGHFAREC 182
CY+C TGH +R+C
Sbjct: 133 CYQCQETGHISRDC 146
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +2
Query: 359 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 493
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +2
Query: 359 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 493
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416
Score = 52.0 bits (119), Expect = 4e-07
Identities = 33/102 (32%), Positives = 42/102 (41%), Gaps = 15/102 (14%)
Frame = +2
Query: 248 QPPGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHI 391
Q PGH + DC KE R CY C GH +R+C + P E S + G
Sbjct: 377 QQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGF 436
Query: 392 ARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVC 508
EG E C+NC GH S CP+ + C+ C
Sbjct: 437 GGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNC 478
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +2
Query: 257 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRESA 427
G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 246 GGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPRE 305
Query: 428 TQTCYNCNKSG 460
+ + SG
Sbjct: 306 GRNGFTGGSSG 316
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 257 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 409
G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 360 GGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 44.4 bits (100), Expect = 8e-05
Identities = 31/97 (31%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Frame = +2
Query: 248 QPPGHFARDCKEEADRCYRCNGT-------------GHIARECAQSPDEP--SCYNCNKT 382
Q PGH +RDC EE NG G A + + C+NC
Sbjct: 402 QQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGE 461
Query: 383 GHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 493
GH + CPE R C+NC + GH S CP+ K
Sbjct: 462 GHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Frame = +2
Query: 248 QPPGHFARDC----KEEADR-CYRCNGTGHIARECAQ 343
Q PGH + DC KE R CY C GH +R+C +
Sbjct: 263 QQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Frame = +2
Query: 416 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVC 508
R C+NC + GH S +CP+ K CY C
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNC 287
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Frame = +2
Query: 416 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVC 508
R C+NC + GH S +CP+ K CY C
Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNC 401
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 257 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 358
GH + +C E C+ C GH + EC +P +P
Sbjct: 462 GHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 494
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +2
Query: 359 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 493
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +2
Query: 359 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 493
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416
Score = 52.0 bits (119), Expect = 4e-07
Identities = 33/102 (32%), Positives = 42/102 (41%), Gaps = 15/102 (14%)
Frame = +2
Query: 248 QPPGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHI 391
Q PGH + DC KE R CY C GH +R+C + P E S + G
Sbjct: 377 QQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGF 436
Query: 392 ARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVC 508
EG E C+NC GH S CP+ + C+ C
Sbjct: 437 GGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNC 478
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +2
Query: 257 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRESA 427
G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 246 GGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPRE 305
Query: 428 TQTCYNCNKSG 460
+ + SG
Sbjct: 306 GRNGFTGGSSG 316
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 257 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 409
G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 360 GGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 44.4 bits (100), Expect = 8e-05
Identities = 31/97 (31%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Frame = +2
Query: 248 QPPGHFARDCKEEADRCYRCNGT-------------GHIARECAQSPDEP--SCYNCNKT 382
Q PGH +RDC EE NG G A + + C+NC
Sbjct: 402 QQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGE 461
Query: 383 GHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 493
GH + CPE R C+NC + GH S CP+ K
Sbjct: 462 GHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Frame = +2
Query: 248 QPPGHFARDC----KEEADR-CYRCNGTGHIARECAQ 343
Q PGH + DC KE R CY C GH +R+C +
Sbjct: 263 QQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Frame = +2
Query: 416 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVC 508
R C+NC + GH S +CP+ K CY C
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNC 287
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Frame = +2
Query: 416 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVC 508
R C+NC + GH S +CP+ K CY C
Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNC 401
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 257 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 358
GH + +C E C+ C GH + EC +P +P
Sbjct: 462 GHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 494
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +2
Query: 359 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 493
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +2
Query: 359 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 493
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416
Score = 52.0 bits (119), Expect = 4e-07
Identities = 33/102 (32%), Positives = 42/102 (41%), Gaps = 15/102 (14%)
Frame = +2
Query: 248 QPPGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHI 391
Q PGH + DC KE R CY C GH +R+C + P E S + G
Sbjct: 377 QQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGF 436
Query: 392 ARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVC 508
EG E C+NC GH S CP+ + C+ C
Sbjct: 437 GGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNC 478
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +2
Query: 257 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRESA 427
G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 246 GGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPRE 305
Query: 428 TQTCYNCNKSG 460
+ + SG
Sbjct: 306 GRNGFTGGSSG 316
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 257 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 409
G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 360 GGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 44.4 bits (100), Expect = 8e-05
Identities = 31/97 (31%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Frame = +2
Query: 248 QPPGHFARDCKEEADRCYRCNGT-------------GHIARECAQSPDEP--SCYNCNKT 382
Q PGH +RDC EE NG G A + + C+NC
Sbjct: 402 QQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGE 461
Query: 383 GHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 493
GH + CPE R C+NC + GH S CP+ K
Sbjct: 462 GHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Frame = +2
Query: 248 QPPGHFARDC----KEEADR-CYRCNGTGHIARECAQ 343
Q PGH + DC KE R CY C GH +R+C +
Sbjct: 263 QQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Frame = +2
Query: 416 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVC 508
R C+NC + GH S +CP+ K CY C
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNC 287
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Frame = +2
Query: 416 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVC 508
R C+NC + GH S +CP+ K CY C
Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNC 401
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 257 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 358
GH + +C E C+ C GH + EC +P +P
Sbjct: 462 GHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 494
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 58.0 bits (134), Expect = 6e-09
Identities = 32/85 (37%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Frame = +2
Query: 257 GHFARDCKEEA---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCP-EGGR 418
GHFA DC + C C GH A +C Q P P C NC + GH A++C E R
Sbjct: 602 GHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVR 660
Query: 419 ESATQTCYNCNKSGHISRNCPDGTK 493
T+ C C + GH CP K
Sbjct: 661 MEPTEPCRRCAEEGHWGYECPTRPK 685
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 272 DCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYN 445
D E C+ C GHI++EC P P C NC + GH A +C + C N
Sbjct: 564 DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PRVPRGPCRN 620
Query: 446 CNKSGHISRNC 478
C GH + +C
Sbjct: 621 CGIEGHFAVDC 631
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
Frame = +2
Query: 257 GHFARDCKEEADR------CYRCNGTGHIARECAQSPDE 355
GHFA+DC+ E R C RC GH EC P +
Sbjct: 648 GHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPKD 686
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 58.0 bits (134), Expect = 6e-09
Identities = 32/85 (37%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Frame = +2
Query: 257 GHFARDCKEEA---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCP-EGGR 418
GHFA DC + C C GH A +C Q P P C NC + GH A++C E R
Sbjct: 602 GHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVR 660
Query: 419 ESATQTCYNCNKSGHISRNCPDGTK 493
T+ C C + GH CP K
Sbjct: 661 MEPTEPCRRCAEEGHWGYECPTRPK 685
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 272 DCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYN 445
D E C+ C GHI++EC P P C NC + GH A +C + C N
Sbjct: 564 DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PRVPRGPCRN 620
Query: 446 CNKSGHISRNC 478
C GH + +C
Sbjct: 621 CGIEGHFAVDC 631
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
Frame = +2
Query: 257 GHFARDCKEEADR------CYRCNGTGHIARECAQSPDE 355
GHFA+DC+ E R C RC GH EC P +
Sbjct: 648 GHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPKD 686
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 55.2 bits (127), Expect = 5e-08
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 359 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 493
+C+NC + GH + +CPE +E + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 52.0 bits (119), Expect = 4e-07
Identities = 33/104 (31%), Positives = 40/104 (38%), Gaps = 17/104 (16%)
Frame = +2
Query: 248 QPPGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCP 406
Q PGH + DC KE R CY C GH +REC + P E N
Sbjct: 164 QQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGG 223
Query: 407 E----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVC 508
GG E C+NC GH S CP+ + C+ C
Sbjct: 224 NDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNC 267
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 362 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 493
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 281 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 409
E + C+ C GH + +C + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Frame = +2
Query: 410 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVC 508
GG E C+NC + GH S +CP+ K CY C
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNC 188
Score = 31.5 bits (68), Expect = 0.64
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQ 188
VCY C + GH +RECT+
Sbjct: 184 VCYNCQQPGHTSRECTE 200
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +2
Query: 188 GGRGVAGFRFQSAT*EVLQVQPPGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 358
GG G G + + + GH + +C E C+ C GH + EC +P +P
Sbjct: 228 GGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 55.2 bits (127), Expect = 5e-08
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 359 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 493
+C+NC + GH + +CPE +E + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 52.0 bits (119), Expect = 4e-07
Identities = 33/104 (31%), Positives = 40/104 (38%), Gaps = 17/104 (16%)
Frame = +2
Query: 248 QPPGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCP 406
Q PGH + DC KE R CY C GH +REC + P E N
Sbjct: 164 QQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGG 223
Query: 407 E----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVC 508
GG E C+NC GH S CP+ + C+ C
Sbjct: 224 NDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNC 267
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 362 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 493
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 281 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 409
E + C+ C GH + +C + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Frame = +2
Query: 410 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVC 508
GG E C+NC + GH S +CP+ K CY C
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNC 188
Score = 31.5 bits (68), Expect = 0.64
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQ 188
VCY C + GH +RECT+
Sbjct: 184 VCYNCQQPGHTSRECTE 200
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +2
Query: 188 GGRGVAGFRFQSAT*EVLQVQPPGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 358
GG G G + + + GH + +C E C+ C GH + EC +P +P
Sbjct: 228 GGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 55.2 bits (127), Expect = 5e-08
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 359 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 493
+C+NC + GH + +CPE +E + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 52.0 bits (119), Expect = 4e-07
Identities = 33/104 (31%), Positives = 40/104 (38%), Gaps = 17/104 (16%)
Frame = +2
Query: 248 QPPGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCP 406
Q PGH + DC KE R CY C GH +REC + P E N
Sbjct: 164 QQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGG 223
Query: 407 E----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVC 508
GG E C+NC GH S CP+ + C+ C
Sbjct: 224 NDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNC 267
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 362 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 493
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 281 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 409
E + C+ C GH + +C + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Frame = +2
Query: 410 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVC 508
GG E C+NC + GH S +CP+ K CY C
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNC 188
Score = 31.5 bits (68), Expect = 0.64
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQ 188
VCY C + GH +RECT+
Sbjct: 184 VCYNCQQPGHTSRECTE 200
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +2
Query: 188 GGRGVAGFRFQSAT*EVLQVQPPGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 358
GG G G + + + GH + +C E C+ C GH + EC +P +P
Sbjct: 228 GGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Frame = +2
Query: 269 RDCKEEADRCYRCNGTGHIARECAQ---SPDEPSCYNCNKTGHIARNCPEGGRESATQ-T 436
+D K C+ C GH +C + S + C+ C H C + G + T
Sbjct: 222 QDQKITGSACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYAT 281
Query: 437 CYNCNKSGHISRNCPDGTKTCY 502
C+ C + GHISR+C Y
Sbjct: 282 CFVCKQVGHISRDCHQNVNGVY 303
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = +2
Query: 359 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC-PDGTK-----TCYVC 508
+C++C + GH +CP+ S+ C+ C H C G K TC+VC
Sbjct: 230 ACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVC 285
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +2
Query: 287 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 457
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 683
Query: 458 GHISRNCP 481
GHI+ NCP
Sbjct: 684 GHIAWNCP 691
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 287 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 409
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 653 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 692
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 260 HFARDCKEEADRCYRCNGTGHIARECAQSPDEPS 361
H A K + C+RCN GHIA C + + S
Sbjct: 665 HMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 698
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +2
Query: 287 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 457
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 586
Query: 458 GHISRNCP 481
GHI+ NCP
Sbjct: 587 GHIAWNCP 594
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 287 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 409
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 556 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 595
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 260 HFARDCKEEADRCYRCNGTGHIARECAQSPDEPS 361
H A K + C+RCN GHIA C + + S
Sbjct: 568 HMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 601
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +2
Query: 287 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 457
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 597
Query: 458 GHISRNCP 481
GHI+ NCP
Sbjct: 598 GHIAWNCP 605
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 287 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 409
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 567 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 606
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 260 HFARDCKEEADRCYRCNGTGHIARECAQSPDEPS 361
H A K + C+RCN GHIA C + + S
Sbjct: 579 HMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 612
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 37.9 bits (84), Expect = 0.007
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Frame = +2
Query: 149 VQPDRAFRARMHAGGRGVAGFRFQSAT*EVLQVQPPGHFARDCK-EEADRCYRCNGTGHI 325
V + FR R GG G+ GF F + D EEA R N + ++
Sbjct: 129 VDVNEIFR-RAFGGGGGMGGFNFDNFAQSAFGHSAAQEMVMDISFEEAVRGATKNVSVNV 187
Query: 326 ARECAQ---SPDEP-----SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 475
+C + + EP SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 188 VEDCLKCHGTQVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 37.9 bits (84), Expect = 0.007
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Frame = +2
Query: 149 VQPDRAFRARMHAGGRGVAGFRFQSAT*EVLQVQPPGHFARDCK-EEADRCYRCNGTGHI 325
V + FR R GG G+ GF F + D EEA R N + ++
Sbjct: 129 VDVNEIFR-RAFGGGGGMGGFNFDNFAQSAFGHSAAQEMVMDISFEEAVRGATKNVSVNV 187
Query: 326 ARECAQ---SPDEP-----SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 475
+C + + EP SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 188 VEDCLKCHGTQVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 362 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 478
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.030
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +2
Query: 257 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 412
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 362 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 478
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.030
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +2
Query: 257 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 412
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 37.1 bits (82), Expect = 0.013
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 431 QTCYNCNKSGHISRNCPDG 487
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 35.5 bits (78), Expect = 0.039
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 359 SCYNCNKTGHIARNCPEG 412
+CY C + GHI+RNCP G
Sbjct: 5 NCYKCQQPGHISRNCPNG 22
Score = 31.9 bits (69), Expect = 0.48
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQG 191
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = +2
Query: 266 ARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYN 445
A+ +A C+ C+ GH A C P + N + + + + + TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 446 CNKSGHISRNCPDG 487
C + GH + C G
Sbjct: 255 CGEKGHYANRCHKG 268
Score = 31.9 bits (69), Expect = 0.48
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGV 197
+S CYKC GH+A C +G +
Sbjct: 247 LSDVTCYKCGEKGHYANRCHKGAL 270
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Frame = +2
Query: 257 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS-----CYNCNKTGHIARNCPEGGRE 421
GH A C + R N H + + PD+ + CY C + GH A C +G
Sbjct: 213 GHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANRCHKGALA 271
Query: 422 SATQTCY 442
+ T +
Sbjct: 272 FLSNTAH 278
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 35.5 bits (78), Expect = 0.039
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = -2
Query: 494 SWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCG-PSCCSCNMTARPGSVRTRALCA 318
S C S G CG+TCC APP S CG P C C V T C
Sbjct: 64 SGCGCGSMGMCGQTCC--------PSAPPPCS---CGTPGCMQCVQQTVLVPVTTTTCCK 112
Query: 317 QCRYICSN 294
C+ +C+N
Sbjct: 113 CCQPVCTN 120
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 293 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 421
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 156
Score = 35.5 bits (78), Expect = 0.039
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 362 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 484
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 113 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 293 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 421
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.5 bits (78), Expect = 0.039
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 362 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 484
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 293 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 421
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.5 bits (78), Expect = 0.039
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 362 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 484
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 293 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 421
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.5 bits (78), Expect = 0.039
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 362 CYNCNKTG-HIARNCPEGGRESATQTCYNCNKSGHISRNCPD 484
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +2
Query: 296 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 460
CY+C GH++++C QS N KT H N E G T N G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEG 366
Score = 32.3 bits (70), Expect = 0.37
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 356 PSCYNCNKTGHIARNCPEGGRES 424
P CY C GH++++CP+ S
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 29.1 bits (62), Expect = 3.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 437 CYNCNKSGHISRNCPDGT 490
CY C GH+S++CP +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGF-NRQRE 233
CYKC GH +++C Q S +SG NR+ E
Sbjct: 313 CYKCKVVGHVSKDCPQS---STNSGVTNRKTE 341
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 35.1 bits (77), Expect = 0.052
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +2
Query: 359 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 493
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +2
Query: 287 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 442
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 428 TQTCYNCNKSGHISRNCPDGTKTCYVC 508
+ TC+NC K GH + C + C C
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANC 227
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 35.1 bits (77), Expect = 0.052
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +2
Query: 359 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 493
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +2
Query: 287 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 442
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 428 TQTCYNCNKSGHISRNCPDGTKTCYVC 508
+ TC+NC K GH + C + C C
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANC 227
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 34.7 bits (76), Expect = 0.069
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Frame = -2
Query: 485 RRDSCGRCGRTCCSYSRSASQ-TPAPPRDSSVRC-GPSC---CS--CNMTARPGSVRTRA 327
RR CGR +CCS S S S P C P C CS CN ++ +
Sbjct: 31 RRQCCGRSSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQQQCSNQCNQQCTSITISSGP 90
Query: 326 LCAQCRYICSNGQPLP 279
C+ C+ CS+ P
Sbjct: 91 SCSSCQSACSSACTTP 106
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 32.7 bits (71), Expect = 0.28
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = -2
Query: 476 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNMTA---RPGSVRTRALC-AQ 315
S +C TC S S+ TP P + V+C PSC +C + P +V+ C Q
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAAVQCVPQCQQQ 158
Query: 314 CRYICSNGQPL-PCNP 270
C+ C QP+ C P
Sbjct: 159 CQQQCVQTQPIQQCQP 174
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 323 IARECAQ--SPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDG 487
+ R+C Q +P + C+ C++ GH +CP+ + + N + R+ G
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSG 1398
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQ 188
C++C+R GHF C Q
Sbjct: 1357 CHQCHRIGHFVESCPQ 1372
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.48
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Frame = -2
Query: 476 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNMTA---RPGSVRTRALC-AQ 315
S +C TC S S+ TP P + V+C PSC +C + P V+ C Q
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAPVQCVPQCQQQ 158
Query: 314 CRYICSNGQPL-PCNP 270
C+ C QP+ C P
Sbjct: 159 CQQQCVQTQPIQQCQP 174
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -2
Query: 509 RTRSTSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 366
R R CR C C RTCC + T P CG CC C
Sbjct: 72 RPRCCCCCRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 116
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -2
Query: 509 RTRSTSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 366
R R CR C C RTCC + T P CG CC C
Sbjct: 75 RPRCCCCCRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 119
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +2
Query: 254 PGHFARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 409
P A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 33 PADLAKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +2
Query: 347 PDEPSCYNCNKTGHIARNC---PEGG-RESATQTCYNCNKSGHISRNCP 481
P+ C C + G +C P+ RE C+ C + GHIS CP
Sbjct: 576 PENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +2
Query: 296 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 409
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
>Z68316-2|CAA92681.1| 352|Caenorhabditis elegans Hypothetical
protein K08E4.3 protein.
Length = 352
Score = 31.1 bits (67), Expect = 0.85
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -2
Query: 521 WPGLRTRSTSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRC 387
W G T +CR D+ G+CG CS + + + RC
Sbjct: 274 WMGANTAHNIYCRYDNVGKCGTIDCSINHFTLKAQNSSEITGDRC 318
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 4/73 (5%)
Frame = -2
Query: 572 RQGGCG*FRASSHSREMWPGLRTRSTSWCRRDSCGRCGRTCCSYSRSASQTPA----PPR 405
RQGGCG G C R C C R CC+ R+ T P
Sbjct: 59 RQGGCGCCGCGCGCCGCGGGGGGGCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPC 118
Query: 404 DSSVRCGPSCCSC 366
CG CC C
Sbjct: 119 CCGCGCGCGCCGC 131
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 11/93 (11%)
Frame = +2
Query: 242 QVQPPGHFARDCKEEADRCY--RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP--- 406
QV P G F CKE+ RC CN + + C PSC +G NC
Sbjct: 1414 QVCPEGRFGAGCKEKC-RCANGHCNASSGECK-CNLGFTGPSCEQSCPSGKYGLNCTLDC 1471
Query: 407 ---EGGRESATQTCYNCNKSGHISR---NCPDG 487
R Q C +C + SR +CP+G
Sbjct: 1472 ECYGQARCDPVQGCCDCPPGRYGSRCQFSCPNG 1504
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 11/93 (11%)
Frame = +2
Query: 242 QVQPPGHFARDCKEEADRCY--RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP--- 406
QV P G F CKE+ RC CN + + C PSC +G NC
Sbjct: 1414 QVCPEGRFGAGCKEKC-RCANGHCNASSGECK-CNLGFTGPSCEQSCPSGKYGLNCTLDC 1471
Query: 407 ---EGGRESATQTCYNCNKSGHISR---NCPDG 487
R Q C +C + SR +CP+G
Sbjct: 1472 ECYGQARCDPVQGCCDCPPGRYGSRCQFSCPNG 1504
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +2
Query: 275 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 451
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 452 KSGHISRNCPDGTKTC 499
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +2
Query: 275 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 451
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 452 KSGHISRNCPDGTKTC 499
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -2
Query: 509 RTRSTSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 366
R R CR C C RTCC +R + CG CC C
Sbjct: 70 RPRCCCCCRPKCCCTCCRTCCC-TRCCTCCRPCCCGCGCGCGCGCCGC 116
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = -2
Query: 509 RTRSTSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 366
R R CRR C C RTCC + T P CG CC C
Sbjct: 88 RPRCCCCCRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 130
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = -2
Query: 509 RTRSTSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 366
R R CRR C C RTCC + T P CG CC C
Sbjct: 89 RPRCCCCCRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 131
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/39 (25%), Positives = 15/39 (38%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRQ 257
C+ C GH AR C + + G+ Q C +
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSCQAE 614
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -2
Query: 467 RCGRTCCSYSRSASQTPAP-PRDSSVRCGPSCCSCNMTARPGSVRTRALC-AQCRYICSN 294
RC TC + + P P PR S+ C PSC P V+ +LC QCR +C+N
Sbjct: 240 RCLPTCIQQIQISVPLPPPAPRCDSM-CMPSC-------SPSCVQQYSLCPQQCRPMCTN 291
>Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical
protein F28F8.7 protein.
Length = 464
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 437 CYNCNKSGHISRNCPDGTKTCYVC 508
C NCNK+ PD TK C +C
Sbjct: 302 CQNCNKALKYYDPIPDDTKLCLIC 325
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 29.5 bits (63), Expect = 2.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 437 CYNCNKSGHISRNCP 481
C++C + GHISR CP
Sbjct: 170 CFHCQEHGHISRMCP 184
Score = 28.3 bits (60), Expect = 6.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 362 CYNCNKTGHIARNCPE 409
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical
protein Y73B3A.13 protein.
Length = 418
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 437 CYNCNKSGHISRNCPDGTKTCYVC 508
C NCNK+ PD TK C +C
Sbjct: 281 CQNCNKALKYYDPIPDDTKLCLIC 304
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 281 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 388
E + C C+GT + + D SC++C ++GH
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = -2
Query: 464 CGRTCCSYSRSASQTPAP-PRDSSVRCGPSCCSCNMTARPGSVRTRALCAQ-CRYICSNG 291
C +TC + S +Q AP P C P+C + P +V+ C Q C C
Sbjct: 107 CQQTCQT-SSCYTQIAAPAPVQCQPSCMPACEQSCVAPAPVTVQCVPQCQQKCTQQCVQA 165
Query: 290 QPL-PCNP 270
QP+ C P
Sbjct: 166 QPIQQCQP 173
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = -2
Query: 464 CGRTCCSYSRSASQTPAP-PRDSSVRCGPSCCSCNMTARPGSVRTRALCAQ-CRYICSNG 291
C +TC + S +Q AP P C P+C + P +V+ C Q C C
Sbjct: 108 CQQTCQT-SSCYTQIAAPAPVQCQPSCMPACEQSCVAPAPVTVQCVPQCQQKCTQQCVQA 166
Query: 290 QPL-PCNP 270
QP+ C P
Sbjct: 167 QPIQQCQP 174
>AC006777-5|AAK72311.1| 247|Caenorhabditis elegans Hypothetical
protein Y46H3D.8 protein.
Length = 247
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 515 GLRTRSTSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCS--CNMTARPGS 342
GL+ ++C++ +C RC + + S S+S + DSS C + C T +
Sbjct: 176 GLQDFVNTYCQK-TCSRCASSTTTASSSSSSCTSYTADSSSACASWAANGFCTNTFYTAA 234
Query: 341 VRTRALCAQCRYIC 300
R ++ CA +C
Sbjct: 235 TR-KSYCATTCKLC 247
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 413 GRESATQTCYNCNKSGHISRNCP 481
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 413 GRESATQTCYNCNKSGHISRNCP 481
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +2
Query: 281 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 448
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 449 NKSGHISRNCPDGTKTC 499
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +2
Query: 281 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 448
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 449 NKSGHISRNCPDGTKTC 499
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.3 bits (60), Expect = 6.0
Identities = 26/81 (32%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 445
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 446 CNKSGHISRNCPDGTKTCYVC 508
CN G N TC VC
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC 2815
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 6.0
Identities = 26/81 (32%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 445
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 446 CNKSGHISRNCPDGTKTCYVC 508
CN G N TC VC
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC 3399
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.3 bits (60), Expect = 6.0
Identities = 26/81 (32%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 445
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 446 CNKSGHISRNCPDGTKTCYVC 508
CN G N TC VC
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC 2815
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 6.0
Identities = 26/81 (32%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 445
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 446 CNKSGHISRNCPDGTKTCYVC 508
CN G N TC VC
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC 3399
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +2
Query: 275 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 451
C+E+ D C + C D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVPRDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 452 KSGHISRNCPDGTKTC 499
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.3 bits (60), Expect = 6.0
Identities = 26/81 (32%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 445
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 446 CNKSGHISRNCPDGTKTCYVC 508
CN G N TC VC
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC 3399
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
Frame = +2
Query: 362 CYNCNKTGHIARN--CP-----EGGRESATQT--CYNCNKSGHISRNCPDGTKTCYVC 508
C C+ T H+ R+ CP E + A + C+ C +SGH C +TC C
Sbjct: 314 CIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKC-SRPRTCNHC 370
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +2
Query: 281 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 448
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 449 NKSGHISRNCPDGTKTC 499
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +2
Query: 281 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 448
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 449 NKSGHISRNCPDGTKTC 499
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/49 (28%), Positives = 18/49 (36%)
Frame = -2
Query: 461 GRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCAQ 315
G C + S P C P CC C+ A+PG A A+
Sbjct: 13 GTLACFPTSQRSYQYGAPTQQFAACTPQCCGCSQ-AQPGPQPAAAAAAR 60
>Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical
protein T24H10.1 protein.
Length = 308
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -2
Query: 473 CGRCGRTCCSYSRSASQTPAPPRDSSVRC 387
CG+CG+ C+Y++ +++ P + V C
Sbjct: 270 CGKCGKKNCTYTQLQTRSSDEPMTTFVFC 298
>Z30423-11|CAD27184.1| 237|Caenorhabditis elegans Hypothetical
protein T20G5.13 protein.
Length = 237
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 469 PQLSRRHQDVLRVRKPGHISRECDEARN*PQPPCLPYNQLC 591
P+ + +H V R+ P I R C EAR P CL QLC
Sbjct: 88 PEKTSQHLSVDRLTNPNFIFRSCCEARGLPD-SCL---QLC 124
>AF039046-14|AAB94214.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 54
protein.
Length = 388
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Frame = -2
Query: 500 STSWCRRDSCGRCGRTCCS-YSRSASQTPAPPRDSSVRCGPSCCS-CNMTARPGSVRTRA 327
S + C+ +C C Y+ A+ TPAP C C S C +P S
Sbjct: 98 SVAQCQPQCQQQCQSQCAPMYNPPATTTPAPVVQCQPMCQQQCQSTCVQQQQPASQCQPQ 157
Query: 326 LCAQCRYIC 300
QC C
Sbjct: 158 CQQQCNVAC 166
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,873,548
Number of Sequences: 27780
Number of extensions: 341288
Number of successful extensions: 1510
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1422
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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