Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0610
         (568 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    24   1.0  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    24   1.0  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   4.2  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   5.6  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.3  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   7.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.7  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    21   9.7  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 91  LDFPLDFKFNSRIKMATSVLQPEDC 165
           L +P+ +K N+    A ++L PEDC
Sbjct: 72  LYYPI-YKLNAAHLAAANILSPEDC 95


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 91  LDFPLDFKFNSRIKMATSVLQPEDC 165
           L +P+ +K N+    A ++L PEDC
Sbjct: 72  LYYPI-YKLNAAHLAAANILSPEDC 95


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 489 HLSYGQVPXPASSRPGVLSISLYAGNATR 403
           H+ + Q+P PA++   +LS ++   N TR
Sbjct: 113 HMQFMQLPHPAAAHSALLSPAM-PHNLTR 140


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +3

Query: 339 NQMRHFIEKHPAIKKCR--QDAPFLLRF 416
           N+M H +++ P  + CR   + P+L  F
Sbjct: 43  NEMYHSVKEEPIYESCRFSINQPYLNHF 70


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +3

Query: 339 NQMRHFIEKHPAIKKCR--QDAPFLLRF 416
           N+M H +++ P  + CR   + P+L  F
Sbjct: 43  NEMYHRVKEEPIYESCRFSINQPYLNHF 70


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +3

Query: 339 NQMRHFIEKHPAIKKCR--QDAPFLLRF 416
           N+M H +++ P  + CR   + P+L  F
Sbjct: 43  NEMYHRVKEEPIYESCRFSINQPYLNHF 70


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 12/50 (24%), Positives = 22/50 (44%)
 Frame = -3

Query: 488  ICRMVRYRXQHRAGLGY*VFLCTQETQQEWCILTAFFNRRMLLYKMSHLI 339
            +C +++ +      LGY +F+ T  T    CI    ++    + K   LI
Sbjct: 894  LCVVLQLQENDWLQLGYLIFVSTLYTANVVCICHVCYSTIQEVSKSGELI 943


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 187 PDIIESPRLTDDERVHILEAKERRP 261
           PDI   P   D ER     +++R P
Sbjct: 115 PDIYPDPEKFDPERFRPENSQKRHP 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,253
Number of Sequences: 336
Number of extensions: 2668
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)