Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0610
(568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF077546-3|AAC26318.3| 347|Caenorhabditis elegans Hypothetical ... 31 0.58
Z83109-11|CAJ43454.1| 345|Caenorhabditis elegans Hypothetical p... 29 3.1
U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated p... 28 4.1
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 28 4.1
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 28 4.1
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 28 4.1
L15314-8|AAF99990.2| 316|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 27 9.4
U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical pr... 27 9.4
U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin prote... 27 9.4
U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin prote... 27 9.4
U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin prote... 27 9.4
U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin prote... 27 9.4
AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin pro... 27 9.4
>AF077546-3|AAC26318.3| 347|Caenorhabditis elegans Hypothetical
protein T08E11.5 protein.
Length = 347
Score = 31.1 bits (67), Expect = 0.58
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 369 PAIKKCRQDAPFLLRFLRTKKYSIPQACSMLXXVPDHTTNVPAMVP 506
P+I+ C + PF+L+FL K+SI + +++P +P
Sbjct: 32 PSIRSCEKKHPFILKFLALNKHSITLNATSYQLAIFQDSDIPLELP 77
>Z83109-11|CAJ43454.1| 345|Caenorhabditis elegans Hypothetical
protein F44G3.12 protein.
Length = 345
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 413 TQQEWCILTAFFNRRMLLYKMSHLIQSFFSQNWI 312
+++ WCI F + + K+S L++S SQN+I
Sbjct: 91 SEKAWCIRFINFMNGLKIRKVSRLLRSAISQNYI 124
>U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated
protein 2, isoform d protein.
Length = 286
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 264 ELPPELREKARIELREDPILREEALNQMRHFIEKH 368
E PP R + ++ +R DPI+R N M H H
Sbjct: 22 ESPPSSRSEYQMSIR-DPIIRRNRYNTMEHSRSSH 55
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 264 ELPPELREKARIELREDPILREEALNQMRHFIEKH 368
E PP R + ++ +R DPI+R N M H H
Sbjct: 1662 ESPPSSRSEYQMSIR-DPIIRRNRYNTMEHSRSSH 1695
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 264 ELPPELREKARIELREDPILREEALNQMRHFIEKH 368
E PP R + ++ +R DPI+R N M H H
Sbjct: 1763 ESPPSSRSEYQMSIR-DPIIRRNRYNTMEHSRSSH 1796
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 264 ELPPELREKARIELREDPILREEALNQMRHFIEKH 368
E PP R + ++ +R DPI+R N M H H
Sbjct: 1763 ESPPSSRSEYQMSIR-DPIIRRNRYNTMEHSRSSH 1796
>L15314-8|AAF99990.2| 316|Caenorhabditis elegans Hypothetical
protein K06H7.1 protein.
Length = 316
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 311 FSQFDPGFFPKLRRQFTGLRSFASRMC 231
F +F+P + K R + T R F SRMC
Sbjct: 6 FRRFEPSYSWKSREKSTENRGFLSRMC 32
>Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical
protein F53B6.2b protein.
Length = 711
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 118 NSRIKMATSVLQPED--CRREHEPKPDIIESPRLTDDERVHILEAKERRPVNCRLSFG 285
NS + SV PE C RE P+ + + + V + A++RR V CR + G
Sbjct: 516 NSICESLASVRPPETRPCHREDCPRWEASQWSECSSQRCVSSMLAQKRRNVTCRFTNG 573
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical protein
F53B6.2a protein.
Length = 1045
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 118 NSRIKMATSVLQPED--CRREHEPKPDIIESPRLTDDERVHILEAKERRPVNCRLSFG 285
NS + SV PE C RE P+ + + + V + A++RR V CR + G
Sbjct: 850 NSICESLASVRPPETRPCHREDCPRWEASQWSECSSQRCVSSMLAQKRRNVTCRFTNG 907
>U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical
protein C28G1.4 protein.
Length = 1081
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 243 SEGTETGELPPELREKARIELREDPILREEALNQMRHFIEKHP-AIKKCRQDA 398
S T ELP + E + L+ED ++EE+ + + ++H +I+K +++
Sbjct: 605 STSTAEAELPMQAMEDFHLSLKEDVDIKEESPSPKDNVADRHEISIEKTLEES 657
>U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin protein
1, isoform a protein.
Length = 953
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 540 LQLSSXQEDPVLEPLRVHLSYGQVPXPASSRPGVLSI 430
LQ++ P+ R + +G + P+SSRP + S+
Sbjct: 242 LQMNGGPTSPLPNGTRRNTGHGGIEFPSSSRPSICSV 278
>U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin protein
1, isoform b protein.
Length = 1028
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 540 LQLSSXQEDPVLEPLRVHLSYGQVPXPASSRPGVLSI 430
LQ++ P+ R + +G + P+SSRP + S+
Sbjct: 317 LQMNGGPTSPLPNGTRRNTGHGGIEFPSSSRPSICSV 353
>U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin protein
1, isoform c protein.
Length = 962
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 540 LQLSSXQEDPVLEPLRVHLSYGQVPXPASSRPGVLSI 430
LQ++ P+ R + +G + P+SSRP + S+
Sbjct: 251 LQMNGGPTSPLPNGTRRNTGHGGIEFPSSSRPSICSV 287
>U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin protein
1, isoform d protein.
Length = 1106
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 540 LQLSSXQEDPVLEPLRVHLSYGQVPXPASSRPGVLSI 430
LQ++ P+ R + +G + P+SSRP + S+
Sbjct: 395 LQMNGGPTSPLPNGTRRNTGHGGIEFPSSSRPSICSV 431
>AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin
protein.
Length = 953
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 540 LQLSSXQEDPVLEPLRVHLSYGQVPXPASSRPGVLSI 430
LQ++ P+ R + +G + P+SSRP + S+
Sbjct: 242 LQMNGGPTSPLPNGTRRNTGHGGIEFPSSSRPSICSV 278
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,459,745
Number of Sequences: 27780
Number of extensions: 248643
Number of successful extensions: 697
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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