Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0609
         (823 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    29   0.13 
AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    27   0.92 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   3.7  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    24   6.5  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 29.5 bits (63), Expect = 0.13
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 486 CIFWIHWQQEGLLWEMFTIH 545
           C+F  HWQ+EG+ W +  ++
Sbjct: 390 CLFISHWQEEGVYWSLHYLY 409


>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 26.6 bits (56), Expect = 0.92
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 146 LEFSKDGMWFVKFYAPWCSHCRRMEP 223
           LE + D +  V F+A WC  C+ + P
Sbjct: 15  LEAAGDQLVVVDFFATWCGPCKVIAP 40



 Score = 26.6 bits (56), Expect = 0.92
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 262 VKVAKVDCTRFTAVASHFHIRAYPTILFLK 351
           + V KVD      +A+ ++I + PT LF+K
Sbjct: 53  IVVVKVDVDECEELAAQYNIASMPTFLFIK 82


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 597 IKHEIKVPNETAIFVYKDNEAFFFEVKDELLEDQ 698
           +KHE+++  E   F Y+       E K+  LE Q
Sbjct: 181 LKHEMQMAEEETQFTYQKKRGIAAERKEARLEKQ 214


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +3

Query: 567 SWFYAMTHEVIKHEIKVPNETAIFVYKDNEAFFFEVKDELLE 692
           SW Y      ++H  ++P    + +  D   F+  V+ ++LE
Sbjct: 174 SWTYNGAQVELRHLDQIPGSNLVQIGIDLSEFYLSVEWDILE 215


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 857,308
Number of Sequences: 2352
Number of extensions: 18644
Number of successful extensions: 83
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87318630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)