Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0608
         (777 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0442 + 3495333-3496484                                           30   2.4  
07_03_0446 - 18285132-18285221,18285437-18285499,18285805-182858...    29   3.1  
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034     28   9.5  
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036     28   9.5  

>12_01_0442 + 3495333-3496484
          Length = 383

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
 Frame = +1

Query: 73  VTRSKRYTGADRRKTARAC*RPPKRPSSAKTRVQTKLTRPR----CSQGSVKDTPKYSE 237
           VTR  R   A     A A   PP +P+S KT+ + K  +P+    C      +TP++ E
Sbjct: 203 VTRPPRTKQAPPTAPAPAPPPPPPQPASPKTKTKAKAKKPKRKRSCVHCGSTETPQWRE 261


>07_03_0446 -
           18285132-18285221,18285437-18285499,18285805-18285867,
           18286079-18286129,18286413-18286506,18286696-18286856,
           18287089-18287145,18287380-18287493,18287934-18287999,
           18288063-18288266,18289207-18289284,18289669-18289788,
           18290425-18290491,18290635-18290735,18290820-18290936,
           18292024-18292107,18292181-18292309,18292385-18292510,
           18292622-18292696,18292814-18292947,18293032-18293137,
           18293220-18293276,18294387-18294573,18295244-18295407,
           18296129-18296353,18296538-18296744,18297043-18297375,
           18297604-18297993
          Length = 1220

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 416 QHFFFSYIKCSVHGDYLHCLLVEFKK 493
           +HFFF + KC      +HC LV FKK
Sbjct: 854 RHFFFLWCKCCT----IHCSLVHFKK 875


>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
          Length = 930

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 217 DTPKYSEPNNHQEAVIVQFSRVKDLSGQCC 306
           D  + S PNNH  + I+  +R+ D++  CC
Sbjct: 286 DILRCSLPNNHLGSRIITTTRIVDVARSCC 315


>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
          Length = 762

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 19/73 (26%), Positives = 27/73 (36%)
 Frame = +1

Query: 67  PAVTRSKRYTGADRRKTARAC*RPPKRPSSAKTRVQTKLTRPRCSQGSVKDTPKYSEPNN 246
           P+  +S+    ADR+K+A     PP++   A    Q  +      Q  V   P   E   
Sbjct: 46  PSADKSQSPGSADRKKSASRITTPPEKQGKATKPAQESVAAKPSPQEPVAVKPSSQEQEQ 105

Query: 247 HQEAVIVQFSRVK 285
                 VQ   VK
Sbjct: 106 QALLAAVQQELVK 118


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,499,045
Number of Sequences: 37544
Number of extensions: 387747
Number of successful extensions: 914
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)