Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0608
         (777 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor, argini...    31   6.1  
BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor, argini...    31   6.1  
BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor, argini...    31   6.1  
BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor, argini...    31   6.1  
AL117417-1|CAB55911.1|  667|Homo sapiens hypothetical protein pr...    31   6.1  
AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR pr...    31   6.1  
AB032998-1|BAA86486.1|  929|Homo sapiens KIAA1172 protein protein.     31   6.1  

>BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor,
           arginine/serine-rich 15 protein.
          Length = 1147

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 17/63 (26%), Positives = 34/63 (53%)
 Frame = +1

Query: 67  PAVTRSKRYTGADRRKTARAC*RPPKRPSSAKTRVQTKLTRPRCSQGSVKDTPKYSEPNN 246
           P +   KR+   +R+  +R+  R PKR  S ++  +++ +R R S+   +D  ++S  + 
Sbjct: 419 PCIQEVKRHMSDNRKSRSRSASRSPKRRRS-RSGSRSRRSRHRRSRSRSRDRRRHSPRSR 477

Query: 247 HQE 255
            QE
Sbjct: 478 SQE 480


>BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor,
           arginine/serine-rich 15 protein.
          Length = 1147

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 17/63 (26%), Positives = 34/63 (53%)
 Frame = +1

Query: 67  PAVTRSKRYTGADRRKTARAC*RPPKRPSSAKTRVQTKLTRPRCSQGSVKDTPKYSEPNN 246
           P +   KR+   +R+  +R+  R PKR  S ++  +++ +R R S+   +D  ++S  + 
Sbjct: 419 PCIQEVKRHMSDNRKSRSRSASRSPKRRRS-RSGSRSRRSRHRRSRSRSRDRRRHSPRSR 477

Query: 247 HQE 255
            QE
Sbjct: 478 SQE 480


>BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor,
           arginine/serine-rich 15 protein.
          Length = 1146

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 17/63 (26%), Positives = 34/63 (53%)
 Frame = +1

Query: 67  PAVTRSKRYTGADRRKTARAC*RPPKRPSSAKTRVQTKLTRPRCSQGSVKDTPKYSEPNN 246
           P +   KR+   +R+  +R+  R PKR  S ++  +++ +R R S+   +D  ++S  + 
Sbjct: 419 PCIQEVKRHMSDNRKSRSRSASRSPKRRRS-RSGSRSRRSRHRRSRSRSRDRRRHSPRSR 477

Query: 247 HQE 255
            QE
Sbjct: 478 SQE 480


>BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor,
           arginine/serine-rich 15 protein.
          Length = 1147

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 17/63 (26%), Positives = 34/63 (53%)
 Frame = +1

Query: 67  PAVTRSKRYTGADRRKTARAC*RPPKRPSSAKTRVQTKLTRPRCSQGSVKDTPKYSEPNN 246
           P +   KR+   +R+  +R+  R PKR  S ++  +++ +R R S+   +D  ++S  + 
Sbjct: 419 PCIQEVKRHMSDNRKSRSRSASRSPKRRRS-RSGSRSRRSRHRRSRSRSRDRRRHSPRSR 477

Query: 247 HQE 255
            QE
Sbjct: 478 SQE 480


>AL117417-1|CAB55911.1|  667|Homo sapiens hypothetical protein
           protein.
          Length = 667

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 17/63 (26%), Positives = 34/63 (53%)
 Frame = +1

Query: 67  PAVTRSKRYTGADRRKTARAC*RPPKRPSSAKTRVQTKLTRPRCSQGSVKDTPKYSEPNN 246
           P +   KR+   +R+  +R+  R PKR  S ++  +++ +R R S+   +D  ++S  + 
Sbjct: 230 PCIQEVKRHMSDNRKSRSRSASRSPKRRRS-RSGSRSRRSRHRRSRSRSRDRRRHSPRSR 288

Query: 247 HQE 255
            QE
Sbjct: 289 SQE 291


>AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR
           protein rA4 protein.
          Length = 1157

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 17/63 (26%), Positives = 34/63 (53%)
 Frame = +1

Query: 67  PAVTRSKRYTGADRRKTARAC*RPPKRPSSAKTRVQTKLTRPRCSQGSVKDTPKYSEPNN 246
           P +   KR+   +R+  +R+  R PKR  S ++  +++ +R R S+   +D  ++S  + 
Sbjct: 429 PCIQEVKRHMSDNRKSRSRSASRSPKRRRS-RSGSRSRRSRHRRSRSRSRDRRRHSPRSR 487

Query: 247 HQE 255
            QE
Sbjct: 488 SQE 490


>AB032998-1|BAA86486.1|  929|Homo sapiens KIAA1172 protein protein.
          Length = 929

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 17/63 (26%), Positives = 34/63 (53%)
 Frame = +1

Query: 67  PAVTRSKRYTGADRRKTARAC*RPPKRPSSAKTRVQTKLTRPRCSQGSVKDTPKYSEPNN 246
           P +   KR+   +R+  +R+  R PKR  S ++  +++ +R R S+   +D  ++S  + 
Sbjct: 223 PCIQEVKRHMSDNRKSRSRSASRSPKRRRS-RSGSRSRRSRHRRSRSRSRDRRRHSPRSR 281

Query: 247 HQE 255
            QE
Sbjct: 282 SQE 284


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,632,935
Number of Sequences: 237096
Number of extensions: 2226989
Number of successful extensions: 3956
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3955
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)