Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0607
(805 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.2
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.2
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.2
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.2
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.2
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 23 2.8
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 23 2.8
AY337337-1|AAP94192.1| 505|Tribolium castaneum cytochrome P450 ... 22 6.6
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 22 6.6
AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450 ... 22 6.6
AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory recept... 21 8.7
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 272 KPFSNEGKPLVVQFTVKHEQDID 340
+P +NE +PL V+F + +Q ID
Sbjct: 20 RPVANESEPLEVKFGLTLQQIID 42
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 272 KPFSNEGKPLVVQFTVKHEQDID 340
+P +NE +PL V+F + +Q ID
Sbjct: 20 RPVANESEPLEVKFGLTLQQIID 42
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 272 KPFSNEGKPLVVQFTVKHEQDID 340
+P +NE +PL V+F + +Q ID
Sbjct: 20 RPVANESEPLEVKFGLTLQQIID 42
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 272 KPFSNEGKPLVVQFTVKHEQDID 340
+P +NE +PL V+F + +Q ID
Sbjct: 20 RPVANESEPLEVKFGLTLQQIID 42
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 272 KPFSNEGKPLVVQFTVKHEQDID 340
+P +NE +PL V+F + +Q ID
Sbjct: 20 RPVANESEPLEVKFGLTLQQIID 42
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 23.0 bits (47), Expect = 2.8
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +3
Query: 165 FGKFKLTAGKFFSDPEDDKGLKTSEDARFYL 257
FGK T FFSD + D + D + L
Sbjct: 203 FGKINRTMRSFFSDNKQDDKIPQISDNLYIL 233
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 23.0 bits (47), Expect = 2.8
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +3
Query: 165 FGKFKLTAGKFFSDPEDDKGLKTSEDARFYL 257
FGK T FFSD + D + D + L
Sbjct: 203 FGKINRTMRSFFSDNKQDDKIPQISDNLYIL 233
>AY337337-1|AAP94192.1| 505|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 505
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 509 SAAKMMSTHICTL*L*NPTTPMKSSL 586
+AA ++S C L L NPT KS++
Sbjct: 85 AAANILSPEDCELVLSNPTHMEKSAI 110
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 21.8 bits (44), Expect = 6.6
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -2
Query: 129 FPTNHQETSPQRIH 88
FP NH P+++H
Sbjct: 41 FPLNHLNEEPEKLH 54
>AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q7 protein.
Length = 505
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 509 SAAKMMSTHICTL*L*NPTTPMKSSL 586
+AA ++S C L L NPT KS++
Sbjct: 85 AAANILSPEDCELVLSNPTHMEKSAI 110
>AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory receptor
candidate 60 protein.
Length = 364
Score = 21.4 bits (43), Expect = 8.7
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -2
Query: 216 HPLGR*RTFQQSI*TFQILFLGAHCTPNCFPTN 118
+P+G S+ F ++FL CT C N
Sbjct: 133 YPVGIVGVKNASLFIFDLIFLSFRCTKLCKEAN 165
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,390
Number of Sequences: 336
Number of extensions: 5189
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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