Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0607
(805 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 124 1e-28
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 119 2e-27
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 115 5e-26
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 111 8e-25
03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026 71 1e-12
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 63 2e-10
05_03_0459 - 14284513-14286336 29 5.7
02_05_0404 - 28700377-28701741,28701842-28702318 29 5.7
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 7.6
06_03_1275 + 28903961-28904123,28904225-28904322,28904406-289045... 28 7.6
01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,437... 28 7.6
05_01_0421 + 3308692-3309070,3309199-3309339,3309776-3309897,331... 28 10.0
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 124 bits (298), Expect = 1e-28
Identities = 57/99 (57%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
Frame = +2
Query: 254 SLSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPD 433
++S K+ FS++ K LV+QF+VKHEQ +DCGGGY+K+ ++QK GETPY IMFGPD
Sbjct: 93 AISAKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETPYSIMFGPD 152
Query: 434 ICGPGTKKVHVIFSYKGKNHLIKKDSAAKM-MSTHICTL 547
ICG TKKVH I + GKNHLIKKD K TH+ TL
Sbjct: 153 ICGYATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVYTL 191
Score = 84.6 bits (200), Expect = 8e-17
Identities = 33/62 (53%), Positives = 45/62 (72%)
Frame = +1
Query: 499 QKRFRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPE 678
+K CK D TH+YTLI++PD Y +LIDN + ++G + DW+ +PPK +DPEAKKPE
Sbjct: 175 KKDVPCKTDQLTHVYTLIIRPDAKYSILIDNTEKQTGSIYDDWNIIPPKNKRDPEAKKPE 234
Query: 679 DW 684
DW
Sbjct: 235 DW 236
Score = 48.4 bits (110), Expect = 7e-06
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 12/68 (17%)
Frame = +3
Query: 87 DVFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDD----------KGLK 230
+VFF+EKF DD WE WV SE G++ T+GK++ D +D G++
Sbjct: 26 EVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGMCEVTLLLCAGIQ 84
Query: 231 TSEDARFY 254
TSED RFY
Sbjct: 85 TSEDYRFY 92
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 119 bits (287), Expect = 2e-27
Identities = 54/99 (54%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
Frame = +2
Query: 254 SLSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPD 433
++S ++ FSN+ K LV+QF+VKHEQ +DCGGGY+K+ ++QK G+TPY IMFGPD
Sbjct: 86 AISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPD 145
Query: 434 ICGPGTKKVHVIFSYKGKNHLIKKDSAAKM-MSTHICTL 547
ICG TKKVH IF+ KNHLIKKD + +H+ TL
Sbjct: 146 ICGYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTL 184
Score = 87.8 bits (208), Expect = 9e-18
Identities = 36/62 (58%), Positives = 46/62 (74%)
Frame = +1
Query: 499 QKRFRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPE 678
+K C+ D +H+YTLI+ PD TY +LIDN + +SG + WD LPPK+IKDPEAKKPE
Sbjct: 168 KKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSIYEHWDILPPKQIKDPEAKKPE 227
Query: 679 DW 684
DW
Sbjct: 228 DW 229
Score = 61.3 bits (142), Expect = 9e-10
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Frame = +3
Query: 87 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFY 254
+VFF+EKF +D WES WV SE E G++ T+GK+ DPED KG++TSED RFY
Sbjct: 30 EVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPED-KGIQTSEDYRFY 85
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 115 bits (276), Expect = 5e-26
Identities = 50/98 (51%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +2
Query: 254 SLSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPD 433
++S K FSN+G+ LV+Q+++K EQDI+CGGGY+K+ + QK G+TPY +MFGPD
Sbjct: 84 AISAKIPEFSNKGRTLVLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGDTPYSLMFGPD 143
Query: 434 ICGPGTKKVHVIFSYKGKNHLIKKDSAAKM-MSTHICT 544
ICG TKK+H+I SY+G+N+ IKKD + TH+ T
Sbjct: 144 ICGTQTKKLHLILSYQGQNYPIKKDLQCETDKLTHVYT 181
Score = 90.6 bits (215), Expect = 1e-18
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = +1
Query: 469 LQLQG*EPPHQKRFRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKK 648
L QG P +K +C+ D TH+YT I++PD +Y +L+DN + ESG + DWD LPP+K
Sbjct: 156 LSYQGQNYPIKKDLQCETDKLTHVYTFILRPDASYSILVDNRERESGSMYTDWDILPPRK 215
Query: 649 IKDPEAKKPEDW 684
IKD AKKP+DW
Sbjct: 216 IKDVHAKKPKDW 227
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Frame = +3
Query: 87 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFY 254
+V FEE+F +D WES WV S+ E G FK TAG++ DP DDKG++T+ DAR +
Sbjct: 28 EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDP-DDKGIQTTLDARHF 83
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 111 bits (266), Expect = 8e-25
Identities = 47/85 (55%), Positives = 64/85 (75%)
Frame = +2
Query: 254 SLSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPD 433
++S KF FSN+ + LVVQ+++K EQDI+CGG Y+K+ + QK G+TPY MFGPD
Sbjct: 84 AISAKFPEFSNKNRTLVVQYSIKIEQDIECGGAYIKLMSGYVNQKKFGGDTPYSFMFGPD 143
Query: 434 ICGPGTKKVHVIFSYKGKNHLIKKD 508
ICG TKK+H+I SY+G+N+ IKKD
Sbjct: 144 ICGDQTKKLHLILSYQGQNYPIKKD 168
Score = 86.2 bits (204), Expect = 3e-17
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = +1
Query: 469 LQLQG*EPPHQKRFRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKK 648
L QG P +K +C+ D TH YT I++PD +Y +L+DN + E G + DWD LPP+K
Sbjct: 156 LSYQGQNYPIKKDLKCETDKLTHFYTFILRPDASYSLLVDNREREFGSMYTDWDILPPRK 215
Query: 649 IKDPEAKKPEDW 684
IK+ AKKP+DW
Sbjct: 216 IKESNAKKPKDW 227
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Frame = +3
Query: 78 INCDVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARF 251
++ +V FEE+F DD W S WV S+ E G FK TAG + DP DD+G++T+ DA+
Sbjct: 25 VSGEVIFEERF-DDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDP-DDRGIQTTSDAKH 82
Query: 252 Y 254
+
Sbjct: 83 F 83
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 640 PKKIKDPEAKKPEDW 684
PK+I DP+ KKPE W
Sbjct: 248 PKEIPDPKDKKPESW 262
>03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026
Length = 585
Score = 70.9 bits (166), Expect = 1e-12
Identities = 31/58 (53%), Positives = 40/58 (68%)
Frame = +1
Query: 499 QKRFRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKK 672
+K C+ D TH+YTLI++PD Y +LIDN + +G + D D LPPKK KDPEAKK
Sbjct: 521 KKDVPCETDQLTHVYTLIIRPDAKYSILIDNTEKRTGSIYGDCDNLPPKKKKDPEAKK 578
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Frame = +2
Query: 272 KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPDICG 442
+P + + +V+QF V+ + ++CGG YLK D + K+ ETPY IMFGPD CG
Sbjct: 81 EPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYTIMFGPDKCG 140
Query: 443 PGTKKVHVIFSYK 481
T KVH I +K
Sbjct: 141 -STNKVHFILKHK 152
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
Frame = +1
Query: 523 DVYTHLYTLIVKPDNTYEVLID-NEKVESGDLEADWDF----LPPKKIKDPEAKKPEDW 684
D +H+YT I+KPDN +L+D EK ++ L AD DF +P K I DP+ KKPEDW
Sbjct: 173 DKLSHVYTAILKPDNEVRILVDGEEKKKANFLSAD-DFEPSLIPSKTIPDPDDKKPEDW 230
Score = 33.9 bits (74), Expect = 0.15
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 553 VKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDW 684
VKPD+ E + E W P++I DPEA KPEDW
Sbjct: 242 VKPDDWDEDAPMEIEDEEATKPEGWLDDEPEEIDDPEANKPEDW 285
>05_03_0459 - 14284513-14286336
Length = 607
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 159 KEFGKFKLTAGKFFS--DPEDDKGLKTSEDARFYLSPVSSNRSVMR 290
++ + K TA F DP D K L S +A++ +SPV S S+ R
Sbjct: 545 EQLQEMKRTAQPVFDIIDPRDMKQLGISGEAQYIVSPVKSRDSLRR 590
>02_05_0404 - 28700377-28701741,28701842-28702318
Length = 613
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 647 KSRTLKPRNQKTGMTSPLFQTPKTRSLRIGTNLNTFQTQCHQT*RLGDEMDG 802
K R + +QK M L TP+ +R+ TNL +CH L E+ G
Sbjct: 538 KRRVVAAHSQKLAMAFGLLSTPEGAPVRVVTNLR-MSKECHAYSALISEIFG 588
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -2
Query: 435 MSGPNIISYGVSPCMSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGL 292
M GP ++ ++P S +Q + +++ +SC+CL T+KGL
Sbjct: 674 MLGPTVLV--LAPTRELASQIQDEAVKFGRSSRVSCTCL-YGGTSKGL 718
>06_03_1275 +
28903961-28904123,28904225-28904322,28904406-28904550,
28904690-28904814,28904957-28905049,28905297-28905362,
28905459-28905524,28905790-28905870,28905947-28906123,
28906212-28906287,28906394-28906521,28906639-28906950
Length = 509
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -2
Query: 123 TNHQETSPQRIHHNLSKIMPA-S*QRPVQQLSFSIHS 16
TNH E P+ H LSKI+ A S RP+ +S+ +H+
Sbjct: 41 TNHVERPPKERH--LSKIIAAASGARPLADVSYCVHA 75
>01_01_0588 +
4372877-4372949,4374328-4376262,4376940-4377015,
4378900-4378970,4379038-4379144,4379241-4379711,
4379791-4379976,4380132-4380425,4380820-4381434,
4382219-4382615,4382768-4382850,4383397-4383567,
4384046-4384243,4384754-4385314,4385401-4385460,
4385553-4385869,4385980-4386403,4386539-4387006,
4387093-4387209,4387306-4387427,4387506-4388247,
4388453-4388485,4388625-4388879,4388975-4389160,
4390115-4390453,4391293-4392045
Length = 3017
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 580 LIDNEKVESGDLEADWDFLPPKKIKDPE 663
L DN K+++GDL +W P + PE
Sbjct: 107 LTDNSKLDTGDLHGEWKEWRPTQCSVPE 134
>05_01_0421 +
3308692-3309070,3309199-3309339,3309776-3309897,
3310369-3310632,3310719-3310849,3311254-3311461,
3311564-3311632,3311722-3311799,3312448-3312621
Length = 521
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1
Query: 121 ESSGNFSSKNTSQFIEDNASKLTTTSTTA 35
ES+G SSK + E++ + TTTSTTA
Sbjct: 59 ESAGVSSSKKKRRIEEESPAATTTTSTTA 87
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,308,239
Number of Sequences: 37544
Number of extensions: 561664
Number of successful extensions: 1579
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1566
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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