Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0607
(805 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 128 6e-30
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 128 6e-30
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 67 2e-11
Z83116-11|CAM84819.1| 278|Caenorhabditis elegans Hypothetical p... 33 0.32
Z66500-8|CAE17939.1| 312|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical... 28 6.8
Z66494-5|CAA91259.1| 473|Caenorhabditis elegans Hypothetical pr... 28 9.0
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 128 bits (308), Expect = 6e-30
Identities = 63/107 (58%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
Frame = +2
Query: 254 SLSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGP 430
S + KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFGP
Sbjct: 71 SRAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGP 130
Query: 431 DICGPGTKKVHVIFSYKGKNHLIKKDSAAKMMS-THICTL*L*NPTT 568
DICGP T++VHVI +YKG+N LIKK+ K TH+ TL L + T
Sbjct: 131 DICGP-TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNT 176
Score = 101 bits (243), Expect = 5e-22
Identities = 46/88 (52%), Positives = 51/88 (57%)
Frame = +1
Query: 499 QKRFRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPE 678
+K CK D THLYTLI+ DNTYEV ID E ++G LE DWD LP KKIKDP+AKKPE
Sbjct: 153 KKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLEEDWDLLPAKKIKDPDAKKPE 212
Query: 679 DWXXXXXXXXXXXXXXXXXXXXXHIPDP 762
DW HIPDP
Sbjct: 213 DWDEREYIDDAEDAKPEDWEKPEHIPDP 240
Score = 72.5 bits (170), Expect = 3e-13
Identities = 30/59 (50%), Positives = 44/59 (74%)
Frame = +3
Query: 78 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFY 254
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFY 70
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 622 DWDFLPPKKIKDPEAKKPEDW 684
DW+ P+ I DP+AKKPEDW
Sbjct: 230 DWE--KPEHIPDPDAKKPEDW 248
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 128 bits (308), Expect = 6e-30
Identities = 63/107 (58%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
Frame = +2
Query: 254 SLSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGP 430
S + KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFGP
Sbjct: 71 SRAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGP 130
Query: 431 DICGPGTKKVHVIFSYKGKNHLIKKDSAAKMMS-THICTL*L*NPTT 568
DICGP T++VHVI +YKG+N LIKK+ K TH+ TL L + T
Sbjct: 131 DICGP-TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNT 176
Score = 101 bits (243), Expect = 5e-22
Identities = 46/88 (52%), Positives = 51/88 (57%)
Frame = +1
Query: 499 QKRFRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPE 678
+K CK D THLYTLI+ DNTYEV ID E ++G LE DWD LP KKIKDP+AKKPE
Sbjct: 153 KKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLEEDWDLLPAKKIKDPDAKKPE 212
Query: 679 DWXXXXXXXXXXXXXXXXXXXXXHIPDP 762
DW HIPDP
Sbjct: 213 DWDEREYIDDAEDAKPEDWEKPEHIPDP 240
Score = 72.5 bits (170), Expect = 3e-13
Identities = 30/59 (50%), Positives = 44/59 (74%)
Frame = +3
Query: 78 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFY 254
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFY 70
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 622 DWDFLPPKKIKDPEAKKPEDW 684
DW+ P+ I DP+AKKPEDW
Sbjct: 230 DWE--KPEHIPDPDAKKPEDW 248
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 66.9 bits (156), Expect = 2e-11
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Frame = +2
Query: 275 PFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFD--CKLEQKDMHGETPYEIMFGPDICGPG 448
PF+ + VVQ+ +K E+ +CGGGYLK+ + + + +T Y IMFGPD CG
Sbjct: 130 PFAFDANTFVVQYDIKFEEGQECGGGYLKLLSEGAEKDLANFQDKTAYTIMFGPDKCG-A 188
Query: 449 TKKVHVIFSYK 481
T KVH+IF YK
Sbjct: 189 TGKVHLIFRYK 199
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +1
Query: 520 DDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWD--FLPPKKIKDPEAKKPEDW 684
DD THL+TL+VKP Y V +D + + G++ +D PPK+I D KP DW
Sbjct: 223 DDHNTHLFTLVVKPTGEYSVSVDGKSLYYGNMMSDVTPALTPPKQIFDETDLKPVDW 279
Score = 35.1 bits (77), Expect = 0.059
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +1
Query: 553 VKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDW 684
VKPD+ E + E+ DW+ + I DPEAKKP+DW
Sbjct: 291 VKPDDWDENEPQSVVDEAATKPYDWNEEENELIADPEAKKPQDW 334
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 586 DNEKVESGDLEADWDFLPPKKIKDPEAKKPEDW 684
+N + ES DWD P+ + D A KP DW
Sbjct: 283 ENIEDESAVKPDDWDENEPQSVVDEAATKPYDW 315
>Z83116-11|CAM84819.1| 278|Caenorhabditis elegans Hypothetical
protein M01B2.12 protein.
Length = 278
Score = 32.7 bits (71), Expect = 0.32
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Frame = -1
Query: 496 EVVLTLVTEDYVYLLGSWTTDVRAEHNLIWSLSVHVLLLQFAVKDLEVSASTVNVLF--- 326
E+ + +V+ D+ LL W+ +VRAE L ++ L F +D + S + L+
Sbjct: 36 EIRIQMVSADFGILLAEWSKEVRAEFTSAELLELYKKCLNFVKEDNKPSMVEITQLYRCK 95
Query: 325 ---MFDSELDDQGFTLITERFELTGER*NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFP 155
+D + Q + T + G R NL + ++ L SG L ++ N P S P
Sbjct: 96 PKEYWDEICNWQSNIMKTYSKDKNGHRGNLINGKI-NGLFFSGRL-----IDWNLPKSSP 149
>Z66500-8|CAE17939.1| 312|Caenorhabditis elegans Hypothetical
protein T05C12.11 protein.
Length = 312
Score = 28.3 bits (60), Expect = 6.8
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +3
Query: 231 TSEDARFYLSPVSSNRSVMRVNPWSSSSLSNMNKTLTVEADTSRSLTAN----WSRRT 392
TS RF+ S SS + ++ V +SSSL T T TSR+ T N WS+ T
Sbjct: 186 TSVSTRFFTSSKSSYKRILEVFGSTSSSLV---LTTTPSTSTSRTTTKNDTNKWSKFT 240
>AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical
protein Y105E8B.7 protein.
Length = 269
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 529 YTHLYTLIVKPDN-TYEVLIDNEKVESGDLEADWDFLPP 642
+TH +TL VKP N Y+ DN+ ++ E F P
Sbjct: 23 HTHKWTLFVKPGNRDYDEFPDNKLIQKVKFEIHESFAQP 61
>Z66494-5|CAA91259.1| 473|Caenorhabditis elegans Hypothetical
protein C34C6.5a protein.
Length = 473
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 300 WSSSSLSNMNKTLTVEADTSRSLTANWSRRTCTERLHM--RLCSALTSVVQE 449
W SS L+ + T+ + T RS+ + S+ TCTE HM +C S +E
Sbjct: 15 WYSSLLTIFSLTIKRKLKTIRSMQDSTSKCTCTEH-HMGGTICCCCRSDAEE 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,446,095
Number of Sequences: 27780
Number of extensions: 481393
Number of successful extensions: 1537
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1527
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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