Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0607
(805 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 25 0.62
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 25 0.62
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.82
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.82
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.82
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.82
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.82
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.82
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.82
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.82
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 22 5.8
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 7.7
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 25.4 bits (53), Expect = 0.62
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 529 YTHLYTLIVKPDNTYEVLIDNEKVES 606
Y H Y + KP N E++ N K+ES
Sbjct: 428 YYHSYKMHQKPYNKDEIIYPNLKIES 453
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 25.4 bits (53), Expect = 0.62
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 529 YTHLYTLIVKPDNTYEVLIDNEKVES 606
Y H Y + KP N E++ N K+ES
Sbjct: 428 YYHSYKMHQKPYNKDEIIYPNLKIES 453
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.82
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 272 KPFSNEGKPLVVQFTVKHEQDID 340
+P +NE +PL V+F + +Q ID
Sbjct: 3 RPVANESEPLEVKFGITLQQIID 25
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.82
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 272 KPFSNEGKPLVVQFTVKHEQDID 340
+P +NE +PL V+F + +Q ID
Sbjct: 3 RPVANESEPLEVKFGITLQQIID 25
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.82
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 272 KPFSNEGKPLVVQFTVKHEQDID 340
+P +NE +PL V+F + +Q ID
Sbjct: 3 RPVANESEPLEVKFGITLQQIID 25
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.82
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 272 KPFSNEGKPLVVQFTVKHEQDID 340
+P +NE +PL V+F + +Q ID
Sbjct: 3 RPVANESEPLEVKFGITLQQIID 25
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.82
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 272 KPFSNEGKPLVVQFTVKHEQDID 340
+P +NE +PL V+F + +Q ID
Sbjct: 3 RPVANESEPLEVKFGITLQQIID 25
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.82
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 272 KPFSNEGKPLVVQFTVKHEQDID 340
+P +NE +PL V+F + +Q ID
Sbjct: 3 RPVANESEPLEVKFGITLQQIID 25
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.0 bits (52), Expect = 0.82
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 272 KPFSNEGKPLVVQFTVKHEQDID 340
+P +NE +PL V+F + +Q ID
Sbjct: 71 RPVANESEPLEVKFGITLQQIID 93
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.0 bits (52), Expect = 0.82
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 272 KPFSNEGKPLVVQFTVKHEQDID 340
+P +NE +PL V+F + +Q ID
Sbjct: 71 RPVANESEPLEVKFGITLQQIID 93
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 22.2 bits (45), Expect = 5.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 240 DARFYLSPVSSNRSVMRVNPWSSSSLSNMN 329
D R YLSP + ++V + N + + LS N
Sbjct: 22 DKRIYLSPRTPIKNVYKNNIETKNQLSPFN 51
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.7
Identities = 6/31 (19%), Positives = 16/31 (51%)
Frame = -1
Query: 490 VLTLVTEDYVYLLGSWTTDVRAEHNLIWSLS 398
++ + ++ + W T + +H+L W+ S
Sbjct: 42 IIDVDEKNQILTTNCWVTQIWTDHHLKWNAS 72
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,606
Number of Sequences: 438
Number of extensions: 5532
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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