Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0606
(756 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 70 2e-12
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 44 1e-04
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 43 2e-04
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 43 2e-04
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 43 3e-04
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 40 0.002
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 40 0.002
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 40 0.002
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 40 0.003
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 40 0.003
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 40 0.003
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 39 0.004
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 38 0.006
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 38 0.006
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 38 0.006
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 38 0.006
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 38 0.008
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 38 0.008
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 38 0.008
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 38 0.008
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 38 0.008
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 38 0.010
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 38 0.010
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 38 0.010
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 38 0.010
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 38 0.010
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 38 0.010
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 36 0.023
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 36 0.041
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 35 0.054
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 35 0.054
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 35 0.054
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 35 0.072
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 34 0.095
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 34 0.095
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 34 0.13
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 34 0.13
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 33 0.17
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 33 0.22
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 33 0.22
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 33 0.22
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.22
Z82256-1|CAB05113.1| 627|Caenorhabditis elegans Hypothetical pr... 32 0.38
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 32 0.51
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 32 0.51
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 31 0.67
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 31 0.67
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 1.2
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 31 1.2
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 31 1.2
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 31 1.2
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 31 1.2
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.0
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 30 2.0
AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical ... 30 2.0
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 30 2.0
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 30 2.0
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 29 3.6
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 29 3.6
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 29 4.7
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 29 4.7
AL023835-6|CAA19483.1| 144|Caenorhabditis elegans Hypothetical ... 28 6.2
Z81579-5|CAB04654.3| 1305|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z81117-14|CAB03313.3| 272|Caenorhabditis elegans Hypothetical p... 28 8.2
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z79753-7|CAB02085.2| 448|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z68217-7|CAA92469.2| 301|Caenorhabditis elegans Hypothetical pr... 28 8.2
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 28 8.2
AY959881-1|AAX56914.1| 1305|Caenorhabditis elegans nephrocystin-... 28 8.2
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 69.7 bits (163), Expect = 2e-12
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +3
Query: 516 NVQPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPLK 695
N++PPL +++F+ANL + K+ EVF MAGK+ +D +DK+G S+G VI+Y HP++
Sbjct: 181 NIEPPLCERIFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEGKSKGVCVIQYTHPIE 240
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = +2
Query: 125 TESRRLFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGK 253
+ +R +F++NI YE RW +LK L +EK G+VA+ ELL D +GK
Sbjct: 42 SNNRMVFITNIAYEARWVDLKSLVREKGGEVAFCELLEDRNGK 84
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +3
Query: 543 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEY 680
V V NL K D+ I+++F+ G++ IDL VD + +RGFA I +
Sbjct: 129 VLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITF 174
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +3
Query: 543 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEY 680
V V NL K D+ I+++F+ G++ IDL VD + +RGFA I +
Sbjct: 274 VLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITF 319
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +2
Query: 92 ANRDRSSDXHRTES-RRLFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKE 256
A DRS+ T+ RRL VSNIP+++R +L +F EKVG V VE++ ++ G +
Sbjct: 85 APNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMF-EKVGPVVDVEIIFNERGSK 139
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +2
Query: 92 ANRDRSSDXHRTES-RRLFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKE 256
A DRS+ T+ RRL VSNIP+++R +L +F EKVG V VE++ ++ G +
Sbjct: 85 APNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMF-EKVGPVVDVEIIFNERGSK 139
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 42.7 bits (96), Expect = 3e-04
Identities = 15/48 (31%), Positives = 31/48 (64%)
Frame = +3
Query: 537 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEY 680
+ +FV ++Y+ ++K++ F+ GK++ + + D+ G RG+A IEY
Sbjct: 104 RTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEY 151
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +3
Query: 543 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYD 683
+F+ NLD D I + F + G + + +A+D+DG S+G+ + ++
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFE 168
Score = 36.3 bits (80), Expect = 0.023
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 543 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHP 689
++V NLD D +K+ F+ G + + + D++G S+GF + ++ P
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKP 367
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +3
Query: 543 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYD 683
+F+ NLD D I + F + G + + +A+D+DG S+G+ + ++
Sbjct: 59 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFE 105
Score = 36.3 bits (80), Expect = 0.023
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 543 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHP 689
++V NLD D +K+ F+ G + + + D++G S+GF + ++ P
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKP 304
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +3
Query: 543 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYD 683
+F+ NLD D I + F + G + + +A+D+DG S+G+ + ++
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFE 168
Score = 36.3 bits (80), Expect = 0.023
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 543 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHP 689
++V NLD D +K+ F+ G + + + D++G S+GF + ++ P
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKP 367
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 540 KVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYD 683
KVFV N+ ++A ++K +F G V ++ KDG +G A +++D
Sbjct: 684 KVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFD 731
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 39.5 bits (88), Expect = 0.003
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +3
Query: 543 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYD 683
+F+ NLD D + + F + G + + +A D +GNS+G+ + ++
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFE 193
Score = 31.5 bits (68), Expect = 0.67
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 543 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEY 680
VFV N DQ K+ +F G++ + + D G +GF + +
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAF 285
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 39.5 bits (88), Expect = 0.003
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +3
Query: 543 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYD 683
+F+ NLD D + + F + G + + +A D +GNS+G+ + ++
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFE 193
Score = 31.5 bits (68), Expect = 0.67
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 543 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEY 680
VFV N DQ K+ +F G++ + + D G +GF + +
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAF 285
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 537 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGN--SRGFAVIEYDH 686
K+V + NL + ++E+F + G ++N+DL D+ N RG+ +EYD+
Sbjct: 133 KRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDN 184
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +3
Query: 537 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEY 680
+ V+V N+D+K+ ++I+E F + GKV + + DK G + FA +E+
Sbjct: 46 RSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEF 94
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 540 KVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVD-KDGNSRGFAVIEYDHP 689
++F+ NL Y + ++ +FK G+V + + +D K G +GFA++E+ P
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFP 330
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Frame = +2
Query: 95 NRDRSSDXHRT---ESRRLFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD 241
+RD+ + R E+ RLF+ N+PY + +L+ LFK K G+V+ V+++ D
Sbjct: 263 SRDKEEETVREKILETGRLFLRNLPYATKEDDLQFLFK-KYGEVSEVQVVID 313
Score = 31.1 bits (67), Expect = 0.88
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = +3
Query: 531 LVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEY 680
+ ++ V NL + ++++ F+ G++ + L K+G RGFA + +
Sbjct: 1 MTTRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGF 50
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +2
Query: 134 RRLFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKE 256
+RL VSNIP+ FR +LK +F EK G V+ VE++ ++ G +
Sbjct: 153 KRLHVSNIPFRFRDPDLKTMF-EKFGVVSDVEIIFNERGSK 192
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +2
Query: 134 RRLFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKE 256
+RL VSNIP+ FR +LK +F EK G V+ VE++ ++ G +
Sbjct: 153 KRLHVSNIPFRFRDPDLKTMF-EKFGVVSDVEIIFNERGSK 192
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = +3
Query: 525 PPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPL 692
PP + ++VAN + D+ ++E+F AG V + L +D N++ FA++E++ L
Sbjct: 9 PPEERTIYVANFSEEVDEELLEELFIQAGPVVKVILRDVRDSNAK-FALVEFEDEL 63
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +3
Query: 543 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVD-KDGNSRGFAVIEYD 683
VFV N+ +A + + + F GK++NI L +D + G +G+A++EY+
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYE 104
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 540 KVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHP 689
K+F+ L + ++KE+ G ++ L VD GNS+G+A EY P
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDP 341
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 540 KVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHP 689
K+F+ L + ++KE+ G ++ L VD GNS+G+A EY P
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDP 341
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 540 KVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHP 689
K+F+ L + ++KE+ G ++ L VD GNS+G+A EY P
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDP 316
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 540 KVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHP 689
K+F+ L + ++KE+ G ++ L VD GNS+G+A EY P
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDP 319
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +3
Query: 537 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEY 680
+K+F+ L K ++ ++E+F G + + + D+DG SRG A + +
Sbjct: 142 RKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTF 189
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +3
Query: 537 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEY 680
+K+F+ L K ++ ++E+F G + + + D+DG SRG A + +
Sbjct: 142 RKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTF 189
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +3
Query: 537 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEY 680
+K+F+ L K ++ ++E+F G + + + D+DG SRG A + +
Sbjct: 142 RKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTF 189
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +3
Query: 537 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEY 680
+K+F+ L K ++ ++E+F G + + + D+DG SRG A + +
Sbjct: 142 RKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTF 189
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +3
Query: 537 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEY 680
+K+F+ L K ++ ++E+F G + + + D+DG SRG A + +
Sbjct: 142 RKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTF 189
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +3
Query: 537 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEY 680
+K+F+ L K ++ ++E+F G + + + D+DG SRG A + +
Sbjct: 142 RKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTF 189
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 36.3 bits (80), Expect = 0.023
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 543 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHP 689
++V NLD D +K+ F+ G + + + D++G S+GF + ++ P
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKP 307
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 35.5 bits (78), Expect = 0.041
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +1
Query: 256 RGCGIVEFTNTEAMKKALFVMHRYELNGRKLVLK-EETGNERRMHTSRPQHREGRNN--R 426
+G G V F N + AL MHR ++ G +++LK + ER Q + RN+ R
Sbjct: 196 KGSGFVRFGNQTDQQMALVEMHRTKVGGCRIILKLAGSRGERLDRGESRQFKSQRNDRRR 255
Query: 427 DDKDNWGINKPREPENLNTY 486
D+K N P+ Y
Sbjct: 256 DEKSGQYRNGTAVPQQTQVY 275
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 35.1 bits (77), Expect = 0.054
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 250 KRRGCGIVEFTNTEAMKKALFVMHRYELNGRKLVLK--EETGNERRMHTSRPQHREGR 417
K +G G FT+ E +AL ++H + L +KL +K E+ ++ R + + R+G+
Sbjct: 85 KLQGFGFCHFTDLEGTLRALRILHEFHLGDKKLTVKPDEKVRDDLRKNAIENRKRQGK 142
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 35.1 bits (77), Expect = 0.054
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 250 KRRGCGIVEFTNTEAMKKALFVMHRYELNGRKLVLK--EETGNERRMHTSRPQHREGR 417
K +G G FT+ E +AL ++H + L +KL +K E+ ++ R + + R+G+
Sbjct: 85 KLQGFGFCHFTDLEGTLRALRILHEFHLGDKKLTVKPDEKVRDDLRKNAIENRKRQGK 142
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 35.1 bits (77), Expect = 0.054
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 537 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRG 662
+K+F+ L K ++ ++E+F G + + + D+DG SRG
Sbjct: 142 RKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRG 183
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 34.7 bits (76), Expect = 0.072
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 537 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYD 683
K VF+ N+D+ + +I+E FK G++ + DK + FA IE+D
Sbjct: 55 KSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFD 104
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 34.3 bits (75), Expect = 0.095
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 137 RLFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKE 256
R++VSNIP+ FR +L +F G V VE++T+D G +
Sbjct: 52 RIYVSNIPFSFREQDLAAMF-FAYGRVLSVEIVTNDRGSK 90
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 34.3 bits (75), Expect = 0.095
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 137 RLFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKE 256
R++VSNIP+ FR +L +F G V VE++T+D G +
Sbjct: 52 RIYVSNIPFSFREQDLAAMF-FAYGRVLSVEIVTNDRGSK 90
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +3
Query: 537 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPL 692
KK+F+ L + + +++ +F G++ + + DG S+G A ++Y H L
Sbjct: 124 KKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGADGASKGCAFVKYKHGL 175
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 519 VQPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYDH 686
V+ P K+FV + ++ ++ +F+ GK+ + DK G +G A + Y H
Sbjct: 23 VKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCH 79
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +3
Query: 537 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPL 692
KK+F+ L + + +++ +F G++ + + DG S+G A ++Y H L
Sbjct: 124 KKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGADGASKGCAFVKYKHGL 175
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 519 VQPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYDH 686
V+ P K+FV + ++ ++ +F+ GK+ + DK G +G A + Y H
Sbjct: 23 VKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCH 79
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 537 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYD 683
K VF+ N+D+ + +++E FK G + + DK + FA IE+D
Sbjct: 61 KSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFD 110
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 537 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKD-GNSRGFAVIEYDHPLK 695
K VF+ NL Y + IKE GK+ + KD G+S+G A + + P++
Sbjct: 263 KVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIE 316
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 137 RLFVSNIPYEFRWTELKDLFKEKVGDVA 220
RLFV N+P E + TELK+LF GD+A
Sbjct: 117 RLFVGNLPNEVKETELKELFSPH-GDIA 143
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 137 RLFVSNIPYEFRWTELKDLFKEKVGDVA 220
RLFV N+P E + TELK+LF GD+A
Sbjct: 117 RLFVGNLPNEVKETELKELFSPH-GDIA 143
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 137 RLFVSNIPYEFRWTELKDLFKEKVGDVA 220
RLFV N+P E + TELK+LF GD+A
Sbjct: 117 RLFVGNLPNEVKETELKELFSPH-GDIA 143
>Z82256-1|CAB05113.1| 627|Caenorhabditis elegans Hypothetical
protein B0513.1 protein.
Length = 627
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = -3
Query: 742 SRSYNIGYQTWNSLYGFNGWSYSMTANPLLLPSLSTAKSMLRTLPAILNTSLILA 578
S+S N G Q W+ L+ + WS + ANP L SL+ SM TL + +N + +LA
Sbjct: 435 SQSGNSGDQ-WSPLFSPSTWSNNTNANP-RLTSLTPLSSMNETLLSGVNYNSLLA 487
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 31.9 bits (69), Expect = 0.51
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 104 RSSDXHRTESRRLFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKEE 259
R R R+ V +P W +LKD ++ GDV Y ++ D +G E
Sbjct: 113 RGGGPQRRTGYRVIVEGLPPTGSWQDLKDHMRD-AGDVCYADVARDGTGVVE 163
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/36 (33%), Positives = 25/36 (69%)
Frame = +2
Query: 125 TESRRLFVSNIPYEFRWTELKDLFKEKVGDVAYVEL 232
+E ++++V N+P + R E++D+F K G + YV++
Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIF-HKYGRIKYVDI 40
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 31.9 bits (69), Expect = 0.51
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 104 RSSDXHRTESRRLFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKEE 259
R R R+ V +P W +LKD ++ GDV Y ++ D +G E
Sbjct: 113 RGGGPQRRTGYRVIVEGLPPTGSWQDLKDHMRD-AGDVCYADVARDGTGVVE 163
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/36 (33%), Positives = 25/36 (69%)
Frame = +2
Query: 125 TESRRLFVSNIPYEFRWTELKDLFKEKVGDVAYVEL 232
+E ++++V N+P + R E++D+F K G + YV++
Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIF-HKYGRIKYVDI 40
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 537 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYD 683
KKVF+ L + +K+ F+ GKV + L DK RGF + +D
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFD 183
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 537 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYD 683
KKVF+ L + +K+ F+ GKV + L DK RGF + +D
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFD 183
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 268 IVEFTNTEAMKKALFVMHRYELNGRKLVLKEETGNERRMHTSRPQHR 408
IV FT+ + ++ A+ + +LNGRKL +ET + R + R + R
Sbjct: 153 IVCFTSHDDLRDAMNKLQGEDLNGRKLKCTDETRDRSRSRSPRRRSR 199
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 540 KVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYD 683
KV+V L A +++E+F G++R + +A GFA +EYD
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVA----RRPPGFAFVEYD 47
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 540 KVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYD 683
KV+V L A +++E+F G++R + +A GFA +EYD
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVA----RRPPGFAFVEYD 47
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 540 KVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYD 683
KV+V L A +++E+F G++R + +A GFA +EYD
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVA----RRPPGFAFVEYD 47
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -3
Query: 676 SMTANPLLLPSLSTAKSMLRTLPA 605
S+ A+PL+LP LS ++ LR+LPA
Sbjct: 388 SLLAHPLILPRLSQQQNQLRSLPA 411
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 104 RSSDXHRTESRRLFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD 241
R D +R++ V+N+P E EL+DLF K+G V + + D
Sbjct: 166 RQIDRNRSDENTCRVTNLPQEMNEDELRDLF-GKIGRVIRIFIARD 210
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 235 DR*QWKRRGCGIVEFTNTEAMKKALFVMHRYELNGRKLVLKEETG 369
DR K +G G +EF + + + A+ ++ YEL+GR L + G
Sbjct: 52 DRETGKPKGYGFIEFPDIQTAEVAIRNLNGYELSGRILRVDSAAG 96
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 543 VFVANLDYKADQAKIKEVFKMAGKVRNI-DLAVDKD-GNSRGFAVIEY 680
+FV NLD + D+ + + F G + + + D D G S+GFA I +
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 149
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 543 VFVANLDYKADQAKIKEVFKMAGKVRNI-DLAVDKD-GNSRGFAVIEY 680
+FV NLD + D+ + + F G + + + D D G S+GFA I +
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 159
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Frame = +3
Query: 471 EFKHIWIKFTIFGSINV------QPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDL 632
E ++W F F + + PP ++K+F+ L + ++ F G V +D
Sbjct: 21 ELPYLWDTFKQFQQMGMGQYQHDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPV--VDA 78
Query: 633 AVDKDGN---SRGFAVIEY 680
V +D N SRGF + +
Sbjct: 79 IVIRDPNTKHSRGFGFVTF 97
>AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical
protein C50D2.8 protein.
Length = 319
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 322 RYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRDDKDN 441
R E ++ + ERR H SR HR ++RD +D+
Sbjct: 257 RKERREKRAEAATTSDTERRRHRSRSPHRSSHDSRDSRDS 296
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 537 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNS-RGFAVIEYD 683
KKVFV L + ++ F+ GKV +I+ DK + R FA I ++
Sbjct: 110 KKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFE 159
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 537 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNS-RGFAVIEYD 683
KKVFV L + ++ F+ GKV +I+ DK + R FA I ++
Sbjct: 110 KKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFE 159
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 140 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD-DSGK 253
+FV N+P+E L F ++G V V ++ D D+GK
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGK 286
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +3
Query: 525 PPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGN---SRGFAVIEY 680
PP ++K+F+ L + ++ F G V +D V +D N SRGF + +
Sbjct: 65 PPQLRKLFIGGLSHDTTDEQLGNYFSQWGPV--VDAIVIRDPNTKHSRGFGFVTF 117
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +3
Query: 525 PPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGN---SRGFAVIEY 680
PP ++K+F+ L + ++ F G V +D V +D N SRGF + +
Sbjct: 66 PPQLRKLFIGGLSHDTTDEQLGNYFSQWGPV--VDAIVIRDPNTKHSRGFGFVTF 118
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/48 (20%), Positives = 25/48 (52%)
Frame = +3
Query: 540 KVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYD 683
++FV + +++E F+ V+++ + DG S+G+ I ++
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFE 114
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/48 (20%), Positives = 25/48 (52%)
Frame = +3
Query: 540 KVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYD 683
++FV + +++E F+ V+++ + DG S+G+ I ++
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFE 115
>AL023835-6|CAA19483.1| 144|Caenorhabditis elegans Hypothetical
protein Y37A1B.6 protein.
Length = 144
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Frame = -2
Query: 386 CILLS-FPVSSFRTSFRPF-NSYRCITNSAFFIASVFVN----STIPHPLLFHCHRSTIL 225
C +L F + F ++F N++ + + F+ + + S P L FH I+
Sbjct: 24 CFMLHYFGKNMFNSNFADIHNTFLMVASFEQFVLEGYYSIDRASNFPENLYFHSVTGKIV 83
Query: 224 HKPHLQLSL 198
HKPH +SL
Sbjct: 84 HKPHSLVSL 92
>Z81579-5|CAB04654.3| 1305|Caenorhabditis elegans Hypothetical
protein R13H4.1 protein.
Length = 1305
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +1
Query: 298 KKALFVMHRYELNGRKL---VLKEETGNERRMHTSRPQHREGRNNRDDKDNWGINKPREP 468
K +FV ++ NGR + + R+ T R G++ R ++ + I PR P
Sbjct: 411 KLEIFVDFKFYENGRSVHNTPTSRRAADSARVQTGRSGDN-GQSARSNRKSVKIETPRSP 469
Query: 469 ENLNTY 486
EN N +
Sbjct: 470 ENSNRF 475
>Z81117-14|CAB03313.3| 272|Caenorhabditis elegans Hypothetical
protein T06E6.3 protein.
Length = 272
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = -2
Query: 689 WVVILNDSKSSTITVFINSQINVTYFTSHFK---YLLNFGLVSFVIQI--CHKHF 540
+++ LN S +F N N+ FT + YLL+FGL++ QI C ++
Sbjct: 67 FIISLNRFLSVFTPIFYNQMFNIK-FTKYIVMGIYLLSFGLITLFFQILGCQNYY 120
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 229 IVDR*QWKRRGCGIVEFTNTEAMKKALFVMHRYELNGRKL 348
+ DR + RG VEFT A ++A+ + + NGR L
Sbjct: 36 VCDRETGRPRGFAFVEFTEEAAAQRAVDQFNGVDFNGRAL 75
>Z79753-7|CAB02085.2| 448|Caenorhabditis elegans Hypothetical
protein F20G2.5 protein.
Length = 448
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +1
Query: 337 GRKLVLKEETGNERRMHTSRPQHREGRNNRDDKDNWGINKPREPENLNTYGLSLQFLDLS 516
G KLV+++ TG M+T + NN + K N ++ S +F+D++
Sbjct: 49 GDKLVIEDSTGTNHEMYTGEITYYAAANNANVKITTKTNNA-------SFHFSWKFIDVT 101
Query: 517 MFN 525
FN
Sbjct: 102 TFN 104
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 540 KVFVANLDYKADQAKIKEVFKMAGKVRNIDL 632
K+FV NL D K+K+VF+ KV D+
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDI 34
>Z68217-7|CAA92469.2| 301|Caenorhabditis elegans Hypothetical
protein F58G6.2 protein.
Length = 301
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = -3
Query: 334 STHTDASQIVPSSLPLCL*IQQYHILFFSTVIGQQFYISHISNFLFEQIFQFRPTKFV 161
S+ +A++ + S++P+ + I ++FF V FY HIS+ + E+I + T F+
Sbjct: 90 SSKKEANKAI-STMPIAVVISSLILIFFGYV--PPFYEIHISSLVLEKIAEQGDTAFL 144
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 540 KVFVANLDYKADQAKIKEVFKMAGKVRNIDL 632
K+FV NL D K+K+VF+ KV D+
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDI 34
>AY959881-1|AAX56914.1| 1305|Caenorhabditis elegans
nephrocystin-4-like protein protein.
Length = 1305
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +1
Query: 298 KKALFVMHRYELNGRKL---VLKEETGNERRMHTSRPQHREGRNNRDDKDNWGINKPREP 468
K +FV ++ NGR + + R+ T R G++ R ++ + I PR P
Sbjct: 411 KLEIFVDFKFYENGRSVHNTPTSRRAADSARVQTGRSGDN-GQSARSNRKSVKIETPRSP 469
Query: 469 ENLNTY 486
EN N +
Sbjct: 470 ENSNRF 475
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/76 (27%), Positives = 31/76 (40%)
Frame = +1
Query: 250 KRRGCGIVEFTNTEAMKKALFVMHRYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRD 429
K R I EA +AL R + +K E ERR H R + E R
Sbjct: 267 KDRSDHIERHRQAEARAEALEKEKREQEEKQKKENLERVEKERREHIERHRQAEARAKAL 326
Query: 430 DKDNWGINKPREPENL 477
+K+ + + ++ ENL
Sbjct: 327 EKEKRELEEKQKKENL 342
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,209,716
Number of Sequences: 27780
Number of extensions: 325974
Number of successful extensions: 1136
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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