BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0605
(774 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY752904-1|AAV30078.1| 84|Anopheles gambiae peroxidase 10 prot... 28 0.28
EF014219-1|ABJ91581.1| 647|Anopheles gambiae cation proton anti... 24 6.0
DQ314781-1|ABC54566.1| 407|Anopheles gambiae OSKAR protein. 23 7.9
>AY752904-1|AAV30078.1| 84|Anopheles gambiae peroxidase 10
protein.
Length = 84
Score = 28.3 bits (60), Expect = 0.28
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 141 HPDLVDLATYGVLVPSNVGSIVDLVFLEML 52
HPD VDL G+L P G +V F E++
Sbjct: 13 HPDDVDLYVGGILEPPVDGGVVGETFAELI 42
>EF014219-1|ABJ91581.1| 647|Anopheles gambiae cation proton
antiporter protein.
Length = 647
Score = 23.8 bits (49), Expect = 6.0
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 470 LVELITLPFVISFLLLNVAFDN 405
L+ L TLP +I L++ + F N
Sbjct: 196 LISLTTLPRLIGMLMVGILFQN 217
>DQ314781-1|ABC54566.1| 407|Anopheles gambiae OSKAR protein.
Length = 407
Score = 23.4 bits (48), Expect = 7.9
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 512 ISGLCLSSGVVFPSLVELITLPFVISFLLLNV 417
+SGLC+S + + + PF+ +L+NV
Sbjct: 244 MSGLCISGLTLSEAAKRVEMAPFIADHVLVNV 275
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,188
Number of Sequences: 2352
Number of extensions: 13604
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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