Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0604
(659 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1111 + 24377268-24377444,24377543-24377630,24378072-243781... 57 1e-08
09_06_0121 + 20975132-20975755,20976834-20976977,20977333-209774... 36 0.022
11_06_0627 + 25633537-25633884,25635246-25635869 34 0.12
10_01_0025 - 328105-328188,328281-328337,328680-328734,328809-32... 33 0.15
11_06_0263 + 21777178-21777342,21777742-21777823,21777939-217780... 33 0.20
03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584 33 0.27
03_01_0618 + 4543013-4543111,4544100-4544177,4544739-4544873,454... 33 0.27
09_01_0139 - 2074193-2077146,2077549-2078043,2078983-2079190 32 0.35
03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964 32 0.35
04_04_1228 + 31888350-31892228,31892568-31893298,31893511-318935... 32 0.47
02_01_0283 + 1903869-1904786 31 0.61
11_06_0277 + 21843658-21845220,21846533-21846718,21847037-218471... 31 0.81
06_01_0504 + 3632108-3632281,3633532-3633699,3633797-3633883,363... 30 1.4
09_06_0328 + 22365308-22365415,22365743-22366018,22366166-223664... 29 2.5
02_04_0260 - 21350060-21350269,21350544-21350604,21350834-213509... 29 2.5
02_02_0241 - 8204430-8205398 29 2.5
09_02_0378 - 8146138-8147091 29 4.3
03_05_0621 - 26198985-26199020,26199539-26199652,26200260-262006... 29 4.3
02_04_0389 - 22570374-22570718,22570807-22570815 29 4.3
12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,398... 28 7.6
12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367... 28 7.6
08_01_0255 + 2089543-2089583,2089696-2090089,2090797-2090862,209... 28 7.6
05_04_0355 - 20577189-20577275,20578001-20578129,20578252-205783... 28 7.6
03_01_0107 + 849489-850652,850745-850835,850926-851083,851180-85... 28 7.6
01_06_0884 + 32715963-32716284,32716837-32717567 28 7.6
>08_02_1111 +
24377268-24377444,24377543-24377630,24378072-24378157,
24378358-24378511,24378723-24378883,24378964-24379632,
24379860-24380058,24380188-24380405,24380578-24380755,
24380859-24381358
Length = 809
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/69 (36%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Frame = +3
Query: 306 VEEKVFHAYDNLWSVKLEAVLAGHEAWVYGVQWHPYSF--DGPTKKPVYRLLSSSLDKTL 479
+E +F + + + V LE++L GHE WVY V+W P + D +P+ +LS+S+DK +
Sbjct: 293 IEGPLFVSSNTHYQVSLESLLVGHEDWVYSVEWQPPTLLTDDEAHQPM-SILSASMDKMM 351
Query: 480 IIWEPDSSS 506
+IW+P+ ++
Sbjct: 352 MIWKPEKNT 360
Score = 44.8 bits (101), Expect = 6e-05
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Frame = +1
Query: 1 VTLKQSISLHSGLCLTLHAQILPCANKPLLLCALD-DHKIHIFVGED---YHRAHTLVGH 168
V+ SIS+ ++L +LP L+L DHK+HI+ G+ + +A L GH
Sbjct: 173 VSCLHSISVGPKPMVSLSLAVLPGQGGHLILAMGGLDHKVHIYCGDQSGKFIKACQLKGH 232
Query: 169 EDWVRGLD-----VLEVDNDTIIVASASQDTYIR 255
DW+R LD ++ + ++ + S+SQD IR
Sbjct: 233 SDWIRSLDFSLPVMMGSEEHSLFLVSSSQDRTIR 266
Score = 35.9 bits (79), Expect = 0.029
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 590 PEGMSFLGHGYNGSFHIW 643
P+G S L HGY GSFH+W
Sbjct: 386 PDGKSILAHGYGGSFHMW 403
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 354 LEAVLAGHEAWVYGVQWHPYSFDGPTKKPVYRLLSSSLDKTLIIWEPDSSSTTKV 518
L A L H+ ++ W+P+S Y + S DKT+ IW SS+ K+
Sbjct: 651 LVAKLEAHKRIIWACSWNPFS---------YEFATGSRDKTVKIWSVQDSSSVKL 696
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 366 LAGHEAWVYGVQWHPYSFDGPTKKPVYRLLSSSLDKTLIIWEPDSSSTT 512
L GH W+ + + G + ++ L+SSS D+T+ IW+ +S + +
Sbjct: 229 LKGHSDWIRSLDFSLPVMMGSEEHSLF-LVSSSQDRTIRIWKMNSDAVS 276
>09_06_0121 +
20975132-20975755,20976834-20976977,20977333-20977457,
20978090-20978194,20978755-20978989
Length = 410
Score = 36.3 bits (80), Expect = 0.022
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = +3
Query: 225 SVGFSRYIHSLWKIQKVKAQPE------SKLIKVEEKVFHAYDNLWSVKLEAVLAGHEAW 386
SV SR + ++ + + P+ +K E V+H D + VL GHEA
Sbjct: 105 SVSISRSVPHKGEVNRARCMPQRPYTVATKTCVDEVHVYHLGDGGEKGGADVVLRGHEAE 164
Query: 387 VYGVQWHPYSFDGPTKKPVYRLLSSSLDKTLIIWE 491
YG+ W P +G LLS S DK + +W+
Sbjct: 165 GYGLAWSPMK-EG-------LLLSGSYDKKICLWD 191
>11_06_0627 + 25633537-25633884,25635246-25635869
Length = 323
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 85 LLLCALDDHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVASASQDTYIR 255
+L A DD IHI+ ++ + GH WV +D V D + VA+ S D +R
Sbjct: 217 VLFTASDDCHIHIYDAKEKSLIGAMSGHASWVLSID---VSPDGMAVATGSSDRTVR 270
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +3
Query: 354 LEAVLAGHEAWVYGVQWHPYSFDGPTKKPVYRLLSSSLDKTLIIWEPDSSSTTKVS 521
L++V HE ++ W P + +P LL+ +LD+T+ +W PD ++ S
Sbjct: 6 LKSVDGAHEESIWAAAWVPAA----DHRPAALLLTGALDETVRLWAPDDLASAAAS 57
>10_01_0025 -
328105-328188,328281-328337,328680-328734,328809-328951,
330772-330909,331010-331120,332621-332684,334179-334378,
334678-334805,335468-335593,335828-335917,336035-336116,
336845-336910
Length = 447
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +3
Query: 351 KLEAVLAGHEAWVYGVQWHPYSFDGPTKKPVYRLLSSSLDKTLIIWEPDS-SSTTKVSG* 527
+L L GH W+ V W P P + R +S+S D IW+ + ++G
Sbjct: 158 QLGTPLTGHRKWITAVSWEPVHLQSPCR----RFVSTSKDGDARIWDMTTRKCVIALTGH 213
Query: 528 RRS-GWAKWEAEAWVSTGA 581
S KW + + TG+
Sbjct: 214 TNSVTCVKWGGDGLIYTGS 232
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 372 GHEAWVYGVQWHPYSFDGPTKKPVYRLLSSSLDKTLIIWEPDSSSTTKVSG*RRSGWAKW 551
GH+ WV + W P DG L+S S LI+W+P T K G +G KW
Sbjct: 122 GHKNWVLCIAWSP---DG------NHLVSGSKSGELILWDP---KTGKQLGTPLTGHRKW 169
Query: 552 -EAEAW 566
A +W
Sbjct: 170 ITAVSW 175
>11_06_0263 +
21777178-21777342,21777742-21777823,21777939-21778028,
21778447-21778604,21778852-21778873,21779048-21779175,
21779486-21779685,21780600-21780663,21781594-21781704,
21781804-21781941,21782306-21782448,21782521-21782575,
21782921-21782977,21783093-21783176
Length = 498
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 351 KLEAVLAGHEAWVYGVQWHPYSFDGPTKKPVYRLLSSSLDKTLIIWE-PDSSSTTKVSG* 527
+L L GH W+ V W P P + R +S+S D IW+ ++G
Sbjct: 209 QLGTPLTGHRKWITAVSWEPVHLQAPCR----RFVSASKDGDARIWDITTRKCVIALTGH 264
Query: 528 RRS-GWAKWEAEAWVSTGA 581
S KW + + TG+
Sbjct: 265 TNSVTCVKWGGDGLIYTGS 283
>03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584
Length = 1218
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +1
Query: 73 ANKPLLLCALDDHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVASASQDTYI 252
A +PL + DD+KI ++ + + TL GH D++R ++ ++ + SAS D I
Sbjct: 61 ATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIR---TVQFHHECPWIVSASDDQTI 117
Query: 253 R 255
R
Sbjct: 118 R 118
>03_01_0618 +
4543013-4543111,4544100-4544177,4544739-4544873,
4544971-4545078,4545397-4545525,4546191-4546306,
4546392-4546509,4547274-4547379,4547492-4547631,
4547735-4547905,4547984-4548094,4548206-4548317,
4548615-4548943,4549064-4549154,4549542-4549637,
4549710-4549780,4549868-4549980,4550353-4550434
Length = 734
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +3
Query: 351 KLEAVLAGHEAWVYGVQWHPYSFDGPTKKPVYRLLSSSLDKTLIIWEPDSSSTTKVSG 524
+L +LAG A V +Q HPY + +S +D T+ +W PD+++T+ ++G
Sbjct: 636 RLIKMLAGDGAVVNCIQSHPYDC---------AVATSGIDNTIKLWTPDANATSMIAG 684
>09_01_0139 - 2074193-2077146,2077549-2078043,2078983-2079190
Length = 1218
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +1
Query: 73 ANKPLLLCALDDHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVASASQDTYI 252
A +PL + DD+KI ++ + + TL GH D++R ++ ++ + SAS D I
Sbjct: 61 ATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIR---TVQFHHEYPWIVSASDDQTI 117
Query: 253 R 255
R
Sbjct: 118 R 118
>03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964
Length = 1218
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +1
Query: 73 ANKPLLLCALDDHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVASASQDTYI 252
A +PL + DD+KI ++ + + TL GH D++R ++ ++ + SAS D I
Sbjct: 61 ATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIR---TVQFHHEYPWIVSASDDQTI 117
Query: 253 R 255
R
Sbjct: 118 R 118
>04_04_1228 + 31888350-31892228,31892568-31893298,31893511-31893586,
31894089-31894164,31894571-31894656,31895414-31895482,
31895579-31895588,31895711-31896207
Length = 1807
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 405 HPYSFDGPTKKPVYRLLSSSLDKTLIIWEPDSSSTTK 515
H F G KP+ RLLSSSL K ++ W + TK
Sbjct: 1682 HTDDFAGVHVKPICRLLSSSLTKLVLGWNDEVERFTK 1718
>02_01_0283 + 1903869-1904786
Length = 305
Score = 31.5 bits (68), Expect = 0.61
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +3
Query: 315 KVFHAYDNLWSVKLEAVLAGHEAWVYGVQWHPYSFDGPTKKPVYRLLSSSLDKTLIIW 488
KV+ Y+ W + L H WV V W P P + S+S D T++IW
Sbjct: 192 KVWKLYNGSWRMDCFPALQMHRDWVRDVAWAP-----NLGLPKSTIASASQDGTVVIW 244
>11_06_0277 +
21843658-21845220,21846533-21846718,21847037-21847165,
21847256-21847415,21847846-21847955,21848038-21848247,
21848473-21848730,21848810-21848885,21849217-21849350,
21849928-21850007,21850265-21850316
Length = 985
Score = 31.1 bits (67), Expect = 0.81
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +3
Query: 420 DGPTKKPVYRLLSSSLDKTLIIWEPDSSSTTKVSG*RRSGWAKWEAEAWVSTGAVLDQKV 599
DGP + ++ SSLD+ + S+ K RR KW +AW+ +++
Sbjct: 333 DGPEIPSIDPMVFSSLDEPEVSSVEPVSNEVKFKKGRRRRLKKW--DAWLDHCREIERD- 389
Query: 600 CPSWDMVTMAL 632
CPSW+ + + L
Sbjct: 390 CPSWEELLLPL 400
>06_01_0504 +
3632108-3632281,3633532-3633699,3633797-3633883,
3634766-3634876,3635114-3635205,3635288-3635393,
3635475-3635561,3637796-3638209
Length = 412
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +3
Query: 258 WKIQKVKAQPESKLIKV--EEKVFHAYDNLWSVKLEAVLAGHEAWVYGVQWHPYSFDGPT 431
W + P+ KL+ V +++ D+ + K+ + L GH + + WHP DG T
Sbjct: 243 WPVNHTSVSPDRKLLAVVGDDRDALLVDSR-NGKVTSTLVGHLDYSFASAWHP---DGRT 298
Query: 432 KKPVYRLLSSSLDKTLIIWEPDSSSTT 512
+ + DKT +W+ + ST+
Sbjct: 299 ------FATGNQDKTCRVWDVRNLSTS 319
>09_06_0328 +
22365308-22365415,22365743-22366018,22366166-22366417,
22366542-22366939,22367028-22368021,22368199-22368409,
22368515-22368749,22368874-22368996,22369190-22369310,
22369416-22369625
Length = 975
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +3
Query: 336 NLWSVK---LEAVLAGHEAWVYGVQWHPY-SFDGPTKKPVYRLLSSSLDKTLIIW 488
++WS+ AVL GH + V GV W P SF + S S DKT+IIW
Sbjct: 150 HIWSMANGICTAVLRGHSSLVKGVTWDPIGSF----------IASQSDDKTVIIW 194
>02_04_0260 -
21350060-21350269,21350544-21350604,21350834-21350901,
21351274-21351483,21351684-21351724,21351923-21351972,
21352084-21352172,21352265-21352339,21352539-21352656,
21352689-21352771,21352854-21352970,21353857-21354074,
21354184-21354241,21354356-21354508
Length = 516
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 353 FHRPKIVICMEHFFLNLNQFGLRLCFDLL 267
FHRPKIV+ + H L N F + F LL
Sbjct: 376 FHRPKIVLLLIHIVLFQNAFEIAFFFWLL 404
>02_02_0241 - 8204430-8205398
Length = 322
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 363 VLAGHEAWVYGVQWHPYSFDGPTKKPVYRLLSSSLDKTLIIWEPDSSSTTK 515
+L H V+G+ W+P D LS+S D TL +W PD ++ +
Sbjct: 106 LLREHAREVHGLDWNPVRRDA--------FLSASWDDTLKLWSPDRPASVR 148
>09_02_0378 - 8146138-8147091
Length = 317
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 435 KPVYRLLSSSLDKTLIIWEPDSSSTTKVSG*RRSGWAKWEAE 560
KPV L+ T + + + T+K G RR W KW AE
Sbjct: 48 KPVKTLVQCG---TKTVKDSEKEPTSKYRGVRRRAWGKWAAE 86
>03_05_0621 -
26198985-26199020,26199539-26199652,26200260-26200623,
26201232-26201527
Length = 269
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +3
Query: 345 SVKLEAVLAGHEAWVYGVQWHPYSFDGPTKKPVYRLLSSSLDKTLIIWEPDSSSTTKVSG 524
++ + +L GH+ +V Q+ P D T RL++SS D+T ++W+ + + G
Sbjct: 35 NIPVSRILTGHKGYVSSCQYVP---DQET-----RLITSSGDQTCVLWDVTTGQRISIFG 86
>02_04_0389 - 22570374-22570718,22570807-22570815
Length = 117
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 306 VEEKVFHA-YDNLWSVKLEAVLAGHEAWVYGVQWHPYSFDGPTKKPVYRLLSSS 464
+ +KV HA + VK E H Y +HPY+F P + VY+ +SS
Sbjct: 60 LRKKVGHATLMTVGEVKKEEKKPEHAVVEYPWSYHPYTFAPPAQHVVYQYPASS 113
>12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,
3983250-3983301,3983497-3983654,3983756-3985617,
3986029-3986093,3986176-3986340,3986836-3986893,
3987479-3987590,3987661-3987712,3988080-3988140,
3988220-3988377,3988705-3988787,3988897-3988945,
3989122-3989185,3990225-3990317,3990410-3990543,
3991364-3991585,3991815-3991937,3992103-3992267,
3993064-3993450
Length = 1479
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 447 RLLSSSLDKTLIIWEPDSSSTTKV 518
+LLSSS+DKT+ +W+ + + KV
Sbjct: 1255 QLLSSSMDKTVRLWDTTTKACLKV 1278
>12_01_0471 -
3672309-3672740,3673159-3673251,3673271-3673399,
3673400-3673448,3674291-3674378,3674477-3674573,
3675195-3675278,3675377-3675464,3676589-3676715,
3676774-3676848,3676934-3677042,3677125-3677448,
3677863-3678039
Length = 623
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 402 WHPYSFDGPTKKPVYRLLSSSLDKTLIIWE 491
W P + DG + VYR S D L++W+
Sbjct: 459 WSPPNSDGTGENTVYRFGSVGQDTQLLLWD 488
>08_01_0255 +
2089543-2089583,2089696-2090089,2090797-2090862,
2091067-2091189,2091605-2091685,2091765-2091857,
2092103-2092178,2092255-2092334,2092433-2092504,
2092937-2092996,2093177-2093273,2093498-2093561,
2093706-2093765,2093942-2094035
Length = 466
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Frame = +3
Query: 264 IQKVKAQPESKLIKVEEKVFHAYDNLWSVKLEAVL------AGHEAWVYGVQWHPYSFDG 425
+ ++K+QP + + + + LW+V+ ++ GH V GV +H
Sbjct: 217 VNEIKSQPSNPSLIISASKDESI-KLWNVQTGILILVFGGVGGHRHEVLGVDFHT----- 270
Query: 426 PTKKPVYRLLSSSLDKTLIIW 488
+YR LS +D T+ IW
Sbjct: 271 ---SDIYRFLSCGMDNTVRIW 288
>05_04_0355 -
20577189-20577275,20578001-20578129,20578252-20578371,
20578505-20578741,20578983-20579258,20579375-20579508,
20580006-20581632
Length = 869
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = +1
Query: 106 DHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVASAS 237
D I+++ +D+ +L GHE + + V++ DN ++ ++ S
Sbjct: 578 DKTINVWSLQDFSHKQSLKGHEHKITAIVVVDNDNQSLCISGDS 621
>03_01_0107 +
849489-850652,850745-850835,850926-851083,851180-851231,
852373-852452,852540-852633,852711-853231,854087-854202,
854242-854293
Length = 775
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 450 LLSSSLDKTLIIWEPDSSSTTKV 518
LLSSS+DKT+ +W+ +S KV
Sbjct: 390 LLSSSMDKTVRLWQVGCNSCLKV 412
>01_06_0884 + 32715963-32716284,32716837-32717567
Length = 350
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +1
Query: 61 ILPCANKPLLLCALDDHKIHIFVGEDYHRAHTLVGHED--WV 180
ILP A P + C L D+ H V D+ R +G D WV
Sbjct: 58 ILPLAEGPAVSCILSDYATHPAVVPDWVRYARYIGAYDDGWV 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,625,831
Number of Sequences: 37544
Number of extensions: 391488
Number of successful extensions: 1130
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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