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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0604
         (659 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_11879| Best HMM Match : WD40 (HMM E-Value=5.8e-21)                  34   0.12 
SB_42943| Best HMM Match : WD40 (HMM E-Value=0)                        32   0.48 
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)                  32   0.48 
SB_32324| Best HMM Match : WD40 (HMM E-Value=6.4e-21)                  32   0.48 
SB_3045| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   0.48 
SB_29408| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   0.51 
SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.63 
SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.83 
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)                   30   1.9  
SB_16656| Best HMM Match : Methyltransf_3 (HMM E-Value=1.2e-19)        30   1.9  
SB_22859| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.9  
SB_19633| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.5  
SB_3142| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   2.5  
SB_48619| Best HMM Match : DUF1572 (HMM E-Value=0.33)                  29   3.4  
SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.4  
SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   5.9  
SB_47014| Best HMM Match : rve (HMM E-Value=6.8e-21)                   28   7.7  
SB_32323| Best HMM Match : WD40 (HMM E-Value=0)                        28   7.7  
SB_18201| Best HMM Match : rve (HMM E-Value=3.6e-21)                   28   7.7  
SB_144| Best HMM Match : rve (HMM E-Value=3.6e-21)                     28   7.7  

>SB_11879| Best HMM Match : WD40 (HMM E-Value=5.8e-21)
          Length = 447

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 15/26 (57%), Positives = 21/26 (80%)
 Frame = +3

Query: 420 DGPTKKPVYRLLSSSLDKTLIIWEPD 497
           DG   +P+  LLS+SLDK+L+IW+PD
Sbjct: 14  DGTFTQPMC-LLSASLDKSLVIWQPD 38


>SB_42943| Best HMM Match : WD40 (HMM E-Value=0)
          Length = 273

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +3

Query: 348 VKLEAVLAGHEAWVYGVQWHPYSFDGPTKKPVYRLLSSSLDKTLIIWE 491
           + L   L GH  WV  +  +P + D         +LSSS DK LI+WE
Sbjct: 42  LSLRGTLKGHNGWVTQIATNPSNPD--------TILSSSRDKKLIVWE 81


>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
          Length = 559

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = +1

Query: 103 DDHKIHIFVGEDYH--RAHTLVGHEDWVRGLDVLEVDNDTIIVASASQDTYIR-CGRYKR 273
           D  K H F+  D+   +   LVG E+ VRGLD  E+D+  ++    + + Y+  CGR  R
Sbjct: 463 DPTKYHKFL-RDFRTGQIQLLVGTEETVRGLDFKELDHVYLMEVPKNVEEYLHLCGRVGR 521


>SB_32324| Best HMM Match : WD40 (HMM E-Value=6.4e-21)
          Length = 123

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +3

Query: 348 VKLEAVLAGHEAWVYGVQWHPYSFDGPTKKPVYRLLSSSLDKTLIIWE 491
           + L   L GH  WV  +  +P + D         +LSSS DK LI+WE
Sbjct: 5   LSLRGTLKGHNGWVTQIATNPSNPD--------TILSSSRDKKLIVWE 44


>SB_3045| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 825

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = +3

Query: 213 HNYRSVGFSRYIHSLWKIQKVKAQPESKLIKVEEKVFHAYDNLWSVKLEAVLAGH 377
           H+ R +  S+YI+++W+    +    S+  + +    HAY    +V + AV   H
Sbjct: 291 HSIRGMKRSQYIYAVWRGHSTRGMIRSQYTRYDTVTVHAYTRYDTVTIHAVWHDH 345



 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +3

Query: 246 IHSLWKIQKVKAQPESKLIKVEEKVFHAYDNLWSVKLEAVLAGHEA 383
           +H++W     +    S+  + +    HAY    +VK+ AV   H A
Sbjct: 190 VHAVWYGHSTRGMARSQYTRYDTVTVHAYTRYDTVKVHAVWHDHSA 235


>SB_29408| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 322

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +3

Query: 216 NYRSVGFSRYIHSLWKIQKVKAQPESKLIKVEEKVFHAYDNLWSVKLEAVLAGHEAW 386
           N R +  S+YIH++W     +    S+ I         Y    +V + AV  GH  +
Sbjct: 15  NTRGMVRSQYIHAVWHDHSTRGMIRSQYIHAVWYGHSTYTRYGTVTVHAVWHGHSTY 71



 Score = 27.5 bits (58), Expect(2) = 0.51
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
 Frame = +3

Query: 237 SRYIHSLWKIQKVKAQPESKLIKVEEKVFHAYDNLWSVKLEAVLAGHEAWV-YG 395
           S+YIH++W     +    S+ I         Y    +V + AV  GH  +  YG
Sbjct: 152 SQYIHAVWHGHSTRGMARSQYIHAVWYGHSTYTRCGTVTVHAVWYGHSTYTRYG 205



 Score = 23.0 bits (47), Expect(2) = 0.51
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 213 HNYRSVGFSRYIHSLW 260
           H+ R +  S+YIH++W
Sbjct: 115 HSTRGMARSQYIHAVW 130


>SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 642

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 21/59 (35%), Positives = 29/59 (49%)
 Frame = +3

Query: 333 DNLWSVKLEAVLAGHEAWVYGVQWHPYSFDGPTKKPVYRLLSSSLDKTLIIWEPDSSST 509
           DNL +  +  +L GH   VY + W P   DG       +LLS S+D + IIW+     T
Sbjct: 165 DNLETWTVSKMLRGHIEDVYDLAWSP---DGT------QLLSGSVDNSAIIWDAIKGKT 214


>SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1649

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +1

Query: 106 DHKIHIFVGEDYHRAHTLVGHEDWVRGLDVLEVDNDTIIVAS 231
           DH + I+  +     HTL GH++WV G+ ++  D+  II +S
Sbjct: 769 DHTVKIWDMDTLSLVHTLKGHKNWVSGV-LVTPDSKRIISSS 809



 Score = 30.3 bits (65), Expect = 1.5
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = +3

Query: 345 SVKLEAVLAGHEAWVYGVQWHPYSFDGPTKKPVYRLLSSSLDKTLIIWEPDS 500
           ++ L   L GH+ WV GV   P S          R++SSS DKT+ IW+ ++
Sbjct: 779 TLSLVHTLKGHKNWVSGVLVTPDS---------KRIISSSYDKTVKIWDVET 821


>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
          Length = 1052

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = -2

Query: 211 RYQLPTRQVP*PSLRVQPEYALCDSPHQRI---YVFCGHPVHKVIAVY 77
           RY +PT + P P  R  P Y     P++++   Y    HP  +V A Y
Sbjct: 646 RYPIPTNRYPLPKNRYPPPYKQVPPPYKQVPHPYKQVPHPYKQVPAPY 693


>SB_16656| Best HMM Match : Methyltransf_3 (HMM E-Value=1.2e-19)
          Length = 613

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
 Frame = +3

Query: 324 HAYDNLWSVKLE---AVLAGHEAWVYGVQWHPY-SF--DGPTKKPVYRLLSSSLDKTLII 485
           HAY + WS   E    +L GH A   G+ +  Y SF  D  TK+ +YR+L+      L +
Sbjct: 175 HAYGHTWSPGYELPAGMLHGH-AVATGMGFGAYLSFCNDWITKQELYRILNLLSGLELSL 233

Query: 486 WEPDSSSTTKV 518
           W P      K+
Sbjct: 234 WHPVMCDNMKI 244


>SB_22859| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1108

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/56 (33%), Positives = 23/56 (41%)
 Frame = +3

Query: 384 WVYGVQWHPYSFDGPTKKPVYRLLSSSLDKTLIIWEPDSSSTTKVSG*RRSGWAKW 551
           W+ G  W  Y  D PT     RLL S L   + I+ P  S  T +    R G   W
Sbjct: 219 WITGYNWS-YVLDAPTADAKCRLLYSVLQNAVDIYFPAKSIKTSLGS--RVGSKAW 271


>SB_19633| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 93

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 17  VYLYILVYVSPFTRKYYHAQINRYYFVHWMTTKYIYSLV 133
           +Y+YI +Y+  +T  Y +     Y + +  T  Y Y+ V
Sbjct: 17  IYIYIYIYIYIYTYTYTYTYTYTYTYTYTYTYTYTYTYV 55



 Score = 29.5 bits (63), Expect = 2.5
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +2

Query: 17  VYLYILVYVSPFTRKYYHAQINRYYFVHWMTTKYIYSLV 133
           +Y+YI +Y   +T  Y +     Y + +  T  Y+Y  V
Sbjct: 21  IYIYIYIYTYTYTYTYTYTYTYTYTYTYTYTYTYVYVYV 59



 Score = 29.1 bits (62), Expect = 3.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +2

Query: 17  VYLYILVYVSPFTRKYYHAQINRYYFVHWMTTKYIYSLV 133
           +Y+YI +Y+  +T  Y +     Y + +  T  Y Y  V
Sbjct: 19  IYIYIYIYIYTYTYTYTYTYTYTYTYTYTYTYTYTYVYV 57



 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +2

Query: 17  VYLYILVYVSPFTRKYYHAQINRYYFVHWMTTKYIYSLVRTIT 145
           +Y+YI +Y+  +   Y +     Y + +  T  Y Y+   T T
Sbjct: 11  IYIYIYIYIYIYIYIYIYTYTYTYTYTYTYTYTYTYTYTYTYT 53



 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +2

Query: 17  VYLYILVYVSPFTRKYYHAQINRYYFVHWMTTKYIYSLV 133
           +Y+YI  Y   +T  Y +     Y + +  T  Y+Y  V
Sbjct: 23  IYIYIYTYTYTYTYTYTYTYTYTYTYTYTYTYVYVYVYV 61


>SB_3142| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2209

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 13/56 (23%), Positives = 26/56 (46%)
 Frame = +2

Query: 23   LYILVYVSPFTRKYYHAQINRYYFVHWMTTKYIYSLVRTITERILWLDTKTGLGDL 190
            LY+L  +      + +A I+  +F+HW     +++L     +R L +  KT    +
Sbjct: 980  LYLLAALFDHEAMFCYAGISARFFLHWFAAVSVFTLAVISVDRFLAVRLKTAYSSI 1035


>SB_48619| Best HMM Match : DUF1572 (HMM E-Value=0.33)
          Length = 478

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = -2

Query: 631 RAIVTMSQEGHTFWSKTAPVETQASASHFAHPDLLYPDTFVVLLESGSQIIRVLSSDDDR 452
           R+++T+  E  TF++ T P+     A H      ++ D F   + S   +++ + S D R
Sbjct: 402 RSVLTLKFELRTFYNSTPPLGIDIPAKHTPEQKTVW-DRFRKRIGSELPVVQCIQSFDKR 460

Query: 451 RRYTGF 434
              T F
Sbjct: 461 LSSTAF 466


>SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 998

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = +3

Query: 339 LWSVKLE---AVLAGHEAWVYGVQWHPYSFDGPTKKPVYRLLSSSLDKTLIIWEPDSSST 509
           +W VK E   AVL GH   V  V W+P     P+      + S+S D T+ IW P +  T
Sbjct: 231 IWHVKNERPIAVLCGHTRTVNCVTWNPLV---PS-----MMASASDDGTVRIWGPSTEET 282

Query: 510 T 512
           +
Sbjct: 283 S 283


>SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 475

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +3

Query: 366 LAGHEAWVYGVQWHPYSFDGPTKKPVYRLLSSSLDKTLIIWEPDSSSTTKVS 521
           L GH    YG+ W+P + +G        LLS+S D T+ +W+  S  +  VS
Sbjct: 239 LKGHTKEGYGLSWNP-NVNG-------NLLSASDDHTICLWDISSGISKDVS 282


>SB_47014| Best HMM Match : rve (HMM E-Value=6.8e-21)
          Length = 752

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 20/80 (25%), Positives = 33/80 (41%)
 Frame = +3

Query: 219 YRSVGFSRYIHSLWKIQKVKAQPESKLIKVEEKVFHAYDNLWSVKLEAVLAGHEAWVYGV 398
           Y S  F  +  + W+I  V   P     K   KV  A + +  + ++A   G + W   +
Sbjct: 639 YSSQEFREFTKA-WEIYHVTVSPHHH--KSNGKVESAVNIMKRIIIKAKKDGSDLWKSLL 695

Query: 399 QWHPYSFDGPTKKPVYRLLS 458
           +W      G +  P  RL+S
Sbjct: 696 EWRNSPTPGTSSSPAQRLMS 715


>SB_32323| Best HMM Match : WD40 (HMM E-Value=0)
          Length = 611

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 79  KPLLLCALDDHKIHIFVGEDYHRAHTLVGHEDWVR 183
           +PL +   DD+KI ++  +      TL+GH D++R
Sbjct: 63  QPLFVSGGDDYKIKVWNYKQKRCLFTLLGHLDYIR 97


>SB_18201| Best HMM Match : rve (HMM E-Value=3.6e-21)
          Length = 322

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 20/80 (25%), Positives = 33/80 (41%)
 Frame = +3

Query: 219 YRSVGFSRYIHSLWKIQKVKAQPESKLIKVEEKVFHAYDNLWSVKLEAVLAGHEAWVYGV 398
           Y S  F  +  + W+I  V   P     K   KV  A + +  + ++A   G + W   +
Sbjct: 152 YSSQEFREFTKA-WEIYHVTVSPHHH--KSNGKVESAVNIMKRIIIKAKKDGSDLWKSLL 208

Query: 399 QWHPYSFDGPTKKPVYRLLS 458
           +W      G +  P  RL+S
Sbjct: 209 EWRNSPTPGTSSSPAQRLMS 228


>SB_144| Best HMM Match : rve (HMM E-Value=3.6e-21)
          Length = 887

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 20/80 (25%), Positives = 33/80 (41%)
 Frame = +3

Query: 219 YRSVGFSRYIHSLWKIQKVKAQPESKLIKVEEKVFHAYDNLWSVKLEAVLAGHEAWVYGV 398
           Y S  F  +  + W+I  V   P     K   KV  A + +  + ++A   G + W   +
Sbjct: 717 YSSQEFREFTKA-WEIYHVTVSPHHH--KSNGKVESAVNIMKRIIIKAKKDGSDLWKSLL 773

Query: 399 QWHPYSFDGPTKKPVYRLLS 458
           +W      G +  P  RL+S
Sbjct: 774 EWRNSPTPGTSSSPAQRLMS 793


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,871,806
Number of Sequences: 59808
Number of extensions: 467700
Number of successful extensions: 1470
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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