Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0603
(779 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672... 73 3e-13
01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672,991... 65 5e-11
09_06_0242 - 21806370-21806483,21806574-21806660,21806865-218069... 56 3e-08
05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 49 4e-06
11_01_0557 + 4394754-4396040 46 3e-05
01_06_1363 - 36681605-36681789,36681875-36681908,36682017-366821... 44 2e-04
01_01_1224 - 9888726-9888820,9889042-9889085,9889194-9889282,988... 35 0.063
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 35 0.083
07_03_0968 - 23027940-23028149,23028800-23029002,23029610-230301... 33 0.34
05_03_0294 + 11818391-11820268,11820332-11820550,11820752-118216... 31 0.78
05_03_0227 + 10655204-10655269,10656333-10656393,10656570-106566... 31 1.0
05_03_0458 + 14280953-14281866,14281964-14282912 30 1.8
08_01_0370 + 3275771-3275789,3275972-3276976,3277062-3277624 29 5.5
03_06_0096 - 31627332-31627570,31628467-31628743,31628963-316291... 29 5.5
05_07_0219 - 28474661-28475146,28475979-28476644 28 9.6
01_03_0308 - 14883728-14884120 28 9.6
>09_06_0351 +
22466160-22466217,22466514-22467052,22467186-22467293,
22467391-22467546,22467916-22468131,22468639-22468776,
22468880-22468981,22469089-22469146,22469346-22469408,
22469543-22469640
Length = 511
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/88 (38%), Positives = 55/88 (62%)
Frame = +3
Query: 507 LTQDGDYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVP 686
L ++ W + G I SSFF+GY++TQI GI + RFG ++ LG G++ S+ +L P
Sbjct: 207 LPMSSEFGWSPATVGLIQSSFFWGYLLTQILGGIWADRFGGKVVLGFGVVWWSIATVLTP 266
Query: 687 VAAEAGYGWLIVVRFIQGLGXGXIVRAL 770
+AA+ G +L+V+R G+G G + A+
Sbjct: 267 LAAKIGLPFLLVMRAFMGIGEGVAMPAM 294
>01_01_1227 +
9912646-9913056,9913306-9913413,9913517-9913672,
9914110-9914325,9914436-9914645,9914722-9914859,
9915076-9915177,9915508-9915603
Length = 478
Score = 65.3 bits (152), Expect = 5e-11
Identities = 32/88 (36%), Positives = 49/88 (55%)
Frame = +3
Query: 507 LTQDGDYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVP 686
L ++ W+ G I SSFF+GY++TQI GI + G + LG G++ S+ L P
Sbjct: 145 LPMSAEFGWNPQTVGLIQSSFFWGYLLTQIAGGIWADTVGGKTVLGFGVIWWSIATALTP 204
Query: 687 VAAEAGYGWLIVVRFIQGLGXGXIVRAL 770
AA+ G +L+V R G+G G + A+
Sbjct: 205 FAAKLGLPFLLVTRAFMGVGEGVAMPAM 232
>09_06_0242 -
21806370-21806483,21806574-21806660,21806865-21806917,
21806999-21807140,21807406-21807501,21808617-21808785,
21808859-21808939,21809032-21809106,21810322-21810387,
21811013-21811158,21811898-21812344
Length = 491
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +3
Query: 525 YAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAA 695
Y W+SS G + SSFF+GY ++Q+P G L+K FG R L +G++ S+ ++P A
Sbjct: 163 YGWNSSTAGLVQSSFFWGYALSQLPGGWLAKLFGGRRVLEIGVVAWSLATAIIPAVA 219
>05_05_0059 +
22011168-22011662,22012668-22012894,22013029-22013377,
22013464-22013508,22013589-22013735,22013851-22013988,
22014126-22014159,22014258-22014430
Length = 535
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = +3
Query: 525 YAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAG 704
Y W SS G + SSF +GYV + + G L+ R+G + + + S+ L P AA
Sbjct: 154 YGWSSSFLGIVQSSFLWGYVFSSMVGGALADRYGGKKVMAGAAALWSLATFLTPWAASQS 213
Query: 705 YGWLIVVRFIQGLGXG 752
L+ +R + GL G
Sbjct: 214 TIMLLAIRALFGLAEG 229
>11_01_0557 + 4394754-4396040
Length = 428
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = +3
Query: 546 QGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLIVV 725
+G ILS F+YGYV++QIP G ++R G RL L + ++ S +VP+ L++
Sbjct: 45 KGMILSMFYYGYVLSQIPGGWAAQRLGGRLVLLLSFVLWSSICAVVPLDPNRVI-LLVLS 103
Query: 726 RFIQGLGXGXI 758
R + G+ G I
Sbjct: 104 RLLVGVAQGLI 114
>01_06_1363 -
36681605-36681789,36681875-36681908,36682017-36682154,
36682578-36682724,36682821-36682865,36683043-36683331,
36683443-36683669,36684109-36684528
Length = 494
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +3
Query: 525 YAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAG 704
Y W S G + SSF +GY+++ I G L +G + + G+ + S+ L P AA
Sbjct: 129 YGWTPSFAGVVQSSFLWGYLVSPIIGGALVDYYGGKRVMAYGVALWSLATFLSPWAAARS 188
Query: 705 YGWLIVVRFIQGLGXG 752
+ R + G+ G
Sbjct: 189 LWLFLSTRVLLGMAEG 204
>01_01_1224 -
9888726-9888820,9889042-9889085,9889194-9889282,
9889390-9889434,9889849-9889956,9890042-9890127,
9890324-9890411,9890669-9890872,9891251-9891326,
9891429-9891478,9891753-9891815,9891942-9891995,
9892079-9892181,9892266-9892368,9892563-9892623,
9892746-9892786,9893183-9893348
Length = 491
Score = 35.1 bits (77), Expect = 0.063
Identities = 19/70 (27%), Positives = 38/70 (54%)
Frame = +3
Query: 549 GYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLIVVR 728
G++ +++F G I+ +P+GI + ++G + + + +L VF L ++ Y IV R
Sbjct: 87 GFVGATYFLGRTISAVPWGIFADKYGRKPCIVISILSVIVFNTLFGLSTT--YWMAIVTR 144
Query: 729 FIQGLGXGXI 758
+ GL G +
Sbjct: 145 GLLGLLCGIL 154
>03_05_0434 +
24252994-24253449,24254791-24254877,24255450-24255748,
24256146-24256383,24256907-24257441,24257527-24257729,
24258311-24258520
Length = 675
Score = 34.7 bits (76), Expect = 0.083
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 531 WDSSLQGY-ILSSF-FYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAG 704
W+ S + +LSS F G +I +G +S ++G R+ L L S G L A
Sbjct: 246 WNISAENESLLSSVVFAGMLIGASGWGFVSDKYGRRICLLFSTLFASGMGFLS--AFSPN 303
Query: 705 YGWLIVVRFIQGLGXG 752
Y L+ +RF+ G+G G
Sbjct: 304 YSCLLALRFLVGIGVG 319
>07_03_0968 -
23027940-23028149,23028800-23029002,23029610-23030138,
23030342-23030579,23031121-23031168,23031199-23031494
Length = 507
Score = 32.7 bits (71), Expect = 0.34
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 16/99 (16%)
Frame = +3
Query: 504 GLTQDGDYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFL------------GV 647
G + ++ + +G + S F G +I G++S R+G + G+
Sbjct: 57 GPSVKAEWGVSGAAEGLVSSVVFAGMLIGACLGGLISDRYGRSFLIATLQSKYIYFNFGI 116
Query: 648 GML----INSVFGLLVPVAAEAGYGWLIVVRFIQGLGXG 752
G L + +FGLL A Y L+V+RF+ GLG G
Sbjct: 117 GFLSTAVVTGIFGLLS--AFSPNYASLLVLRFVVGLGLG 153
>05_03_0294 + 11818391-11820268,11820332-11820550,11820752-11821644,
11829889-11829905,11829927-11830183
Length = 1087
Score = 31.5 bits (68), Expect = 0.78
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -3
Query: 444 SKSCVVDHSNDGDRHVRPHDVSVCHSEKQHERNPVPSSKPAWFVRGI 304
S + VV+H D R PH VS +Q P P+ P G+
Sbjct: 910 SAALVVEHDEDDPRSAHPHPVSTRPGREQGGEAPEPNGGPRSLTAGV 956
>05_03_0227 +
10655204-10655269,10656333-10656393,10656570-10656672,
10656768-10656870,10656951-10657004,10657124-10657186,
10657884-10658105,10658249-10658336,10658561-10658646,
10659003-10659110,10659201-10659245,10659511-10659601,
10659662-10659765
Length = 397
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = +3
Query: 549 GYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLIVVR 728
G++ +S+F + +P+GI + ++G + + + +L F L ++ Y IV R
Sbjct: 40 GFVAASYFLARTFSSVPWGIFADKYGRKPCIVISILSVIFFNTLFGLSTR--YWMAIVTR 97
Query: 729 FIQGLGXGXI 758
+ G+ G +
Sbjct: 98 GMLGMLCGIL 107
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 751 PSPSPCMNLTTMSHPYPASAATGTSRPNTEFI-SIPTPRN 635
P P P L+ SHP P + T+ P+ + +PTPR+
Sbjct: 75 PPPLPPTTLSCSSHPTPPPPPSPTTSPSASSLPPVPTPRS 114
>08_01_0370 + 3275771-3275789,3275972-3276976,3277062-3277624
Length = 528
Score = 28.7 bits (61), Expect = 5.5
Identities = 23/65 (35%), Positives = 30/65 (46%)
Frame = +3
Query: 537 SSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWL 716
S+L G I +F Y + G L R R+FL +GM +VF L AGY WL
Sbjct: 118 SALLGEIDVAFLAVYSVGMFFAGHLGDRMDLRIFLTIGMFGTAVFTALF----GAGY-WL 172
Query: 717 IVVRF 731
+ F
Sbjct: 173 NIHNF 177
>03_06_0096 -
31627332-31627570,31628467-31628743,31628963-31629118,
31629205-31629381,31629543-31629745,31630680-31630995
Length = 455
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = -2
Query: 751 PSPSPCMNLTTMSHPYPASAATGTSRPNTEFISIPTPRNKRAPNL 617
P+P P NLT + H AA G +P + + +N P +
Sbjct: 80 PTPPPAANLTRVDHTGAVRAADGARKPCLKILGPEKLQNLELPEV 124
>05_07_0219 - 28474661-28475146,28475979-28476644
Length = 383
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -2
Query: 751 PSPSPCMNLTTMSHPYPASAATGTSRPNT 665
P PSP T HP P S AT +SR T
Sbjct: 74 PPPSPPPLSATTPHPPPPSPATSSSRTAT 102
>01_03_0308 - 14883728-14884120
Length = 130
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 760 TMXPSPSPCMNLTTMSHPYPASAATGTSRPNTE 662
T PSPSP N T P+P ++ + TE
Sbjct: 33 TALPSPSPIENSTASRSPFPTTSPSMIDEQTTE 65
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,522,099
Number of Sequences: 37544
Number of extensions: 444891
Number of successful extensions: 1482
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1481
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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