BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0603 (779 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_37350| Best HMM Match : MFS_1 (HMM E-Value=4.9e-07) 79 4e-15 SB_12290| Best HMM Match : MFS_1 (HMM E-Value=9.6e-16) 72 6e-13 SB_51537| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07 SB_24826| Best HMM Match : MFS_1 (HMM E-Value=1.1e-26) 54 2e-07 SB_31394| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07 SB_17852| Best HMM Match : MFS_1 (HMM E-Value=0.00068) 51 1e-06 SB_16303| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06 SB_43984| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 5e-05 SB_32467| Best HMM Match : MFS_1 (HMM E-Value=0.41) 41 0.001 SB_53973| Best HMM Match : TP2 (HMM E-Value=8.2) 38 0.012 SB_40774| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.012 SB_39460| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.012 SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092) 37 0.021 SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) 33 0.20 SB_32251| Best HMM Match : MFS_1 (HMM E-Value=2.5e-19) 31 0.79 SB_32247| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0 SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4 SB_39292| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2 SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 29 4.2 SB_7514| Best HMM Match : OATP (HMM E-Value=0) 28 7.4 SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4 SB_17372| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8 SB_12845| Best HMM Match : Collagen (HMM E-Value=6.2) 28 9.8 SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17) 28 9.8 >SB_37350| Best HMM Match : MFS_1 (HMM E-Value=4.9e-07) Length = 349 Score = 79.0 bits (186), Expect = 4e-15 Identities = 31/78 (39%), Positives = 48/78 (61%) Frame = +3 Query: 513 QDGDYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVA 692 +DG + WD QG +L +FFYGY++TQ+P G L+ +G + G+G+ ++F LL P+A Sbjct: 95 EDGPFKWDQDTQGLVLGAFFYGYLVTQLPGGWLAGHYGGKSVFGLGVFFTAIFTLLTPIA 154 Query: 693 AEAGYGWLIVVRFIQGLG 746 A L+ VR + G G Sbjct: 155 ARTHVALLVAVRLMAGFG 172 Score = 36.7 bits (81), Expect = 0.021 Identities = 17/33 (51%), Positives = 21/33 (63%) Frame = +1 Query: 337 RHWVTFMLFLGMANAYIMRTNMSVAIVAMVNHT 435 R+ + M F G Y MR N+SVA+VAMVN T Sbjct: 34 RNVLVLMQFAGFVTVYGMRANLSVALVAMVNQT 66 >SB_12290| Best HMM Match : MFS_1 (HMM E-Value=9.6e-16) Length = 432 Score = 71.7 bits (168), Expect = 6e-13 Identities = 34/77 (44%), Positives = 44/77 (57%) Frame = +3 Query: 522 DYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEA 701 ++ WDS+LQG +L SFFYGY + QIP L+ R G G G+ + S+ LL PVA Sbjct: 160 EFNWDSALQGLVLGSFFYGYWVLQIPGAWLAMRIGGTRVFGYGVFVTSLLALLTPVATRY 219 Query: 702 GYGWLIVVRFIQGLGXG 752 L+ VR QGL G Sbjct: 220 SVWGLVGVRIFQGLFLG 236 Score = 37.1 bits (82), Expect = 0.016 Identities = 17/40 (42%), Positives = 25/40 (62%) Frame = +1 Query: 325 GLGTRHWVTFMLFLGMANAYIMRTNMSVAIVAMVNHTALT 444 G+ R+ + M +LG N Y MR N++VAIV MVN ++ Sbjct: 110 GIPKRYVLLAMTWLGFINIYSMRVNLNVAIVGMVNDQTIS 149 >SB_51537| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 256 Score = 54.4 bits (125), Expect = 1e-07 Identities = 26/71 (36%), Positives = 37/71 (52%) Frame = +3 Query: 555 ILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLIVVRFI 734 +L SF+YGY + QIP G + G + G G+L+ SV L+ P + + I +R Sbjct: 3 VLGSFYYGYAVLQIPAGWAVLKIGGKPIFGFGILVASVLALVTPPIVKQSFIVFICLRIA 62 Query: 735 QGLGXGXIVRA 767 QGL G I A Sbjct: 63 QGLSLGLIASA 73 >SB_24826| Best HMM Match : MFS_1 (HMM E-Value=1.1e-26) Length = 473 Score = 53.6 bits (123), Expect = 2e-07 Identities = 25/68 (36%), Positives = 41/68 (60%) Frame = +3 Query: 540 SLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLI 719 +++G +L SF+YGYV Q+ G L+ + GA G +L+ S+ LL P+AA L+ Sbjct: 63 AVEGVVLGSFYYGYVALQLLGGWLAIKIGATRLYGAAILVASLLTLLTPLAARGSPYLLV 122 Query: 720 VVRFIQGL 743 +R ++GL Sbjct: 123 ALRMLEGL 130 >SB_31394| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 67 Score = 51.2 bits (117), Expect = 9e-07 Identities = 25/63 (39%), Positives = 36/63 (57%) Frame = +3 Query: 555 ILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLIVVRFI 734 IL SF+YGY++ QIP G L+ + G G G+ S L P+AA LI++R + Sbjct: 3 ILGSFYYGYMVFQIPGGWLAMKLGGAKLFGFGIFSASFLTLFTPLAARCSPIALIILRVL 62 Query: 735 QGL 743 +GL Sbjct: 63 EGL 65 >SB_17852| Best HMM Match : MFS_1 (HMM E-Value=0.00068) Length = 256 Score = 50.8 bits (116), Expect = 1e-06 Identities = 29/77 (37%), Positives = 40/77 (51%) Frame = +3 Query: 522 DYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEA 701 D W+ G +LSSFF+GY+ITQIP G LS +GA L + S+ L++P+ A Sbjct: 65 DMGWNKRESGLVLSSFFWGYLITQIPGGFLSDVYGAERLLLWAVTGCSLSTLVIPLVASQ 124 Query: 702 GYGWLIVVRFIQGLGXG 752 I + I L G Sbjct: 125 KVTSPITLVLISRLALG 141 >SB_16303| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 249 Score = 50.0 bits (114), Expect = 2e-06 Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 6/90 (6%) Frame = +3 Query: 522 DYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEA 701 D AWD G ++S+FF+GY QI G LS ++G + LG +I S L VP Sbjct: 53 DLAWDKEADGAVMSAFFWGYTPAQIVGGYLSDKYGGEVVLGYAAIIWSFCTLAVPFLPGK 112 Query: 702 GYGW------LIVVRFIQGLGXGXIVRALT 773 + + +I+ R + GL G +LT Sbjct: 113 AFLFFPPIVMVILSRVVTGLSQGLHYPSLT 142 >SB_43984| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 93 Score = 45.6 bits (103), Expect = 5e-05 Identities = 21/46 (45%), Positives = 31/46 (67%) Frame = +3 Query: 582 VITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLI 719 ++TQ+P G+L++RFG R+ LG ML +S+F L PVAA L+ Sbjct: 1 MLTQVPGGMLAQRFGGRVVLGSCMLFSSIFVFLSPVAARTHVALLV 46 >SB_32467| Best HMM Match : MFS_1 (HMM E-Value=0.41) Length = 366 Score = 41.1 bits (92), Expect = 0.001 Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 1/36 (2%) Frame = +1 Query: 337 RHWVTFMLFLGMANAYIMRTNMSVAIVAMV-NHTAL 441 R+ V + LG AN Y MR N+SVA+VAMV NHT L Sbjct: 53 RYLVAVLALLGFANVYGMRVNLSVALVAMVSNHTRL 88 >SB_53973| Best HMM Match : TP2 (HMM E-Value=8.2) Length = 185 Score = 37.5 bits (83), Expect = 0.012 Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = +1 Query: 298 DEDSSDKPSGLGTRHWVTFMLFLGMANAYIMRTNMSVAIVAMVN-HT 435 D K G R+ V M+FLG+ Y +R N+SVAI AM N HT Sbjct: 22 DGKDRKKHPGFPKRYIVAIMVFLGICVQYALRVNLSVAIGAMCNPHT 68 >SB_40774| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 184 Score = 37.5 bits (83), Expect = 0.012 Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = +1 Query: 298 DEDSSDKPSGLGTRHWVTFMLFLGMANAYIMRTNMSVAIVAMVN-HT 435 D K G R+ V M+FLG+ Y +R N+SVAI AM N HT Sbjct: 22 DGKDRKKHPGFPKRYIVAIMVFLGICVQYALRVNLSVAIGAMCNPHT 68 >SB_39460| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 78 Score = 37.5 bits (83), Expect = 0.012 Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = +1 Query: 298 DEDSSDKPSGLGTRHWVTFMLFLGMANAYIMRTNMSVAIVAMVN-HT 435 D K G R+ V M+FLG+ Y +R N+SVAI AM N HT Sbjct: 22 DGKDRKKHPGFPKRYIVAIMVFLGICVQYALRVNLSVAIGAMCNPHT 68 >SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092) Length = 676 Score = 36.7 bits (81), Expect = 0.021 Identities = 16/37 (43%), Positives = 24/37 (64%) Frame = +1 Query: 337 RHWVTFMLFLGMANAYIMRTNMSVAIVAMVNHTALTV 447 R+ + M FLG N Y +R N++VA+ AMVN+ + V Sbjct: 326 RYVLAIMTFLGFMNMYALRVNLNVALGAMVNNHTVNV 362 >SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) Length = 544 Score = 33.5 bits (73), Expect = 0.20 Identities = 28/74 (37%), Positives = 34/74 (45%), Gaps = 2/74 (2%) Frame = +3 Query: 537 SSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAE-AGYGW 713 SSL S F G++ I FGILS ++G R L I+S V A+ Y W Sbjct: 90 SSLSWATNSIMFTGWLFGNIVFGILSDKYGRRKVL----FISSCMVCWVAFASSFVPYYW 145 Query: 714 LIVV-RFIQGLGXG 752 L V RF G G G Sbjct: 146 LYAVFRFFIGFGLG 159 >SB_32251| Best HMM Match : MFS_1 (HMM E-Value=2.5e-19) Length = 509 Score = 31.5 bits (68), Expect = 0.79 Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Frame = +3 Query: 534 DSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAG-YG 710 D L G++ S+ G +S G + + + +L+N LL + G Sbjct: 40 DFKLYGFVFGSYALSQAFMSPLLGYISDARGLKFAIILAILLNGAGNLLYAFSYAVGSVN 99 Query: 711 WLIVVRFIQGLGXGXI 758 ++ RF+ GLG G I Sbjct: 100 MVLAGRFVAGLGAGAI 115 >SB_32247| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2209 Score = 31.1 bits (67), Expect = 1.0 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Frame = +1 Query: 286 LAIMDEDSSDKPSGLGTRHWVT---FMLFLGMANAYIMRTNMSVAIVAMVNHTALTVIAE 456 +A+ +ED DK T W T + + LGM ++ +S A++ ++ Sbjct: 2080 IAVNEEDLQDKGRRRATDPWWTSKAYQILLGMTLGVTLKQKLSATDRALLFRVSMPSTWS 2139 Query: 457 EIDTECGPV 483 + T CGPV Sbjct: 2140 TVRTWCGPV 2148 >SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1333 Score = 29.9 bits (64), Expect = 2.4 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = +2 Query: 14 LRATNTSSRK-HGVLTSAYSHSFIIINTNNPNHKCKNTSQSRTSVKNSN 157 +R T R H V+ A SHS+ N NN N+ N + + + N+N Sbjct: 237 VRETGRQRRSTHHVMRRAVSHSYNNNNNNNNNNNNNNNNNNNNNNNNNN 285 >SB_39292| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 707 Score = 29.1 bits (62), Expect = 4.2 Identities = 22/90 (24%), Positives = 37/90 (41%) Frame = +1 Query: 370 MANAYIMRTNMSVAIVAMVNHTALTVIAEEIDTECGPVNPNKTSVV*PKTATTPGTLHYK 549 M + +++ T + + M NHT T+ + T C NP T++ P A T H + Sbjct: 204 MCDHHVLTTMWNHTLTTMYNHTLNTMCNHTLTTTC---NPALTTMCNP--ALTTMCNHTR 258 Query: 550 AIFYRRFSTVMSSHKFLSGFCRRGSELACS 639 + T M +H L+ C C+ Sbjct: 259 TTMCKHTLTTMCNHT-LTTMCNHTMTTMCN 287 >SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) Length = 453 Score = 29.1 bits (62), Expect = 4.2 Identities = 12/31 (38%), Positives = 14/31 (45%) Frame = +3 Query: 378 RLHHEDEHVGRHRCYGQPHSSYCHR*RDRHR 470 R HH H H + H + HR R RHR Sbjct: 308 RYHHHHHHRHHHHHHHHHHQRHRHRHRHRHR 338 >SB_7514| Best HMM Match : OATP (HMM E-Value=0) Length = 763 Score = 28.3 bits (60), Expect = 7.4 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = +3 Query: 525 YAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLV 683 Y + SSL G++ SSF ++ L R ++ GVG+L + G+L+ Sbjct: 63 YGYSSSLTGFLTSSFDIAALVLTPLVSFLGARRKKPVWCGVGLLTMGI-GMLI 114 >SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 367 Score = 28.3 bits (60), Expect = 7.4 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +2 Query: 71 HSFIIINTNNPNHKCKNTSQSRTSVKNSNFLTD 169 H F N NN N+ KN + + T+ N+N T+ Sbjct: 221 HGFNNNNNNNNNNNNKNNNNNNTTTNNNNTTTN 253 >SB_17372| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 364 Score = 27.9 bits (59), Expect = 9.8 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -2 Query: 724 TTMSHPYPASAATGTSRPNTEFISIPTP 641 TTMS P SA+ TSRP+T P P Sbjct: 120 TTMSPPVSPSASVSTSRPSTLSPVTPPP 147 >SB_12845| Best HMM Match : Collagen (HMM E-Value=6.2) Length = 183 Score = 27.9 bits (59), Expect = 9.8 Identities = 18/72 (25%), Positives = 31/72 (43%) Frame = +3 Query: 531 WDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYG 710 W +SL+G + + + FG L+ + F G+ ++ FG L A+ G+G Sbjct: 52 WGASLRGKYKGLWGLAFAASTKGFGGLAFAASTKGFGGLAFAASTGFGGLAFAASTKGFG 111 Query: 711 WLIVVRFIQGLG 746 L +G G Sbjct: 112 GLAFAASTKGFG 123 >SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17) Length = 1850 Score = 27.9 bits (59), Expect = 9.8 Identities = 16/50 (32%), Positives = 20/50 (40%) Frame = -2 Query: 766 ARTMXPSPSPCMNLTTMSHPYPASAATGTSRPNTEFISIPTPRNKRAPNL 617 A P+P P + P+PA T P IS P P +R P L Sbjct: 1469 AERRTPAPDPAER--RVPPPFPAERRTPAPDPGERQISSPFPAERRIPPL 1516 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,051,627 Number of Sequences: 59808 Number of extensions: 528339 Number of successful extensions: 1833 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 1486 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1810 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2131907602 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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