Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0601
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    25   0.85 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   4.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   4.6  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   6.0  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   6.0  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   8.0  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = -1

Query: 187 YMMQPRLQISTSNEWPFFVNISGAM*FGVPHRVCFLSPSYSILAARPKSP 38
           + M+  L  ST    PFF        F VP      SPS +  +  P+SP
Sbjct: 248 FNMERLLAPSTEVSAPFFRQPLDLYNFRVPQHQVLQSPSSTSSSPEPRSP 297


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 99  GTPNYIAPEI 128
           G PNYI+PE+
Sbjct: 445 GDPNYISPEV 454


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 46  LVLQQGLNMKERENRLCVVPQTTLPL 123
           LVL + L +K  + ++ ++P+T LPL
Sbjct: 30  LVLNKYLLVKHSKPKMPLLPKTPLPL 55


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 99  GTPNYIAPEI 128
           G PNYI+PE+
Sbjct: 393 GDPNYISPEV 402


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 746 SWYPXSVFVAVVDPLANPHQRLCCGIAQLVCQSLR 642
           +WY  SVF+  +  L   +  +C  I Q    SLR
Sbjct: 205 TWYSISVFMVPLVVLIFTYTSICIEIWQSSESSLR 239


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 372 NSCCRSLSTDGRRAGFDCNC 313
           N C  + S   R A F+CNC
Sbjct: 113 NPCRNNGSCVDRIADFECNC 132


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 392 AKSPMRRIHAAEVC 351
           AK PMR +H   VC
Sbjct: 187 AKPPMRVLHQCPVC 200


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,751
Number of Sequences: 336
Number of extensions: 4651
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)