Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0600
         (891 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     26   0.46 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   3.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.2  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   3.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   3.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   5.6  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   5.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   5.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   7.4  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 778 GVVRTQPVDCSDFGCMYRFCT 840
           GV R + + C DF  +YR CT
Sbjct: 12  GVNRCKLLSCKDFDTLYRDCT 32


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -1

Query: 300 ANTYEYECWI*SYVCRRDKLLKVSFSVQDHTP 205
           +N Y Y C   SY  +    LK+      HTP
Sbjct: 282 SNVYRYSCRDCSYATKYCHSLKIHLRRYGHTP 313


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 216 LGQKKTPSTTCPAYKHSFR 272
           LG   TP+ +C  Y+H  R
Sbjct: 146 LGASSTPTNSCMEYQHLHR 164


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +2

Query: 80  FYKMPGVRKYRRDTSEVSCCLKYVIFGVNVLFWL 181
           +Y  P  +KY    ++   CL  V+  + V++WL
Sbjct: 30  WYDFPTNQKYYPSLAKCYACLLMVVKILWVIYWL 63


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 216 LGQKKTPSTTCPAYKHSFR 272
           LG   TP+ +C  Y+H  R
Sbjct: 146 LGASSTPTNSCMEYQHLHR 164


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 216 LGQKKTPSTTCPAYKHSFR 272
           LG   TP+ +C  Y+H  R
Sbjct: 146 LGASSTPTNSCMEYQHLHR 164


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 136 LFKICNFWCKCFVLVSGLNSPRCGCVVLDRKRHLQQLVPPT 258
           L K CN + +C      L   RC  +++  +R L+ +VPPT
Sbjct: 166 LGKSCNRYWQCQGGYPRLQ--RCPAMLVFDRRSLRCVVPPT 204


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = +3

Query: 606 SSGAAGAREACGVPFSCCRNKPQDIIRNKQCGYDVRKS 719
           SS  + + +AC   ++      Q +++++ C YD   S
Sbjct: 166 SSNNSASPKACQFLYNQFPGSSQVVVKDETCQYDTESS 203


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = +3

Query: 606 SSGAAGAREACGVPFSCCRNKPQDIIRNKQCGYDVRKS 719
           SS  + + +AC   ++      Q +++++ C YD   S
Sbjct: 186 SSNNSASPKACQFLYNQFPGSSQVVVKDETCQYDTESS 223


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/20 (35%), Positives = 16/20 (80%)
 Frame = +2

Query: 146 YVIFGVNVLFWLVGLIVLAV 205
           ++IF +++LF+ V +I+L +
Sbjct: 219 FIIFTIHLLFYCVLIILLCI 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,548
Number of Sequences: 336
Number of extensions: 5516
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)