Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0600
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical pr... 89 3e-18
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 60 3e-09
AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin f... 50 2e-06
AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin f... 50 2e-06
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 45 8e-05
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin fam... 40 0.002
AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical ... 39 0.004
U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin fam... 39 0.006
Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein. 37 0.017
U61953-1|AAC48075.2| 569|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z49071-4|CAA88877.1| 166|Caenorhabditis elegans Hypothetical pr... 29 5.9
U64598-2|AAK39214.2| 558|Caenorhabditis elegans Hypothetical pr... 28 7.8
U61945-5|AAB03128.1| 517|Caenorhabditis elegans Hypothetical pr... 28 7.8
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical
protein T14G10.6 protein.
Length = 308
Score = 89.4 bits (212), Expect = 3e-18
Identities = 50/140 (35%), Positives = 71/140 (50%), Gaps = 11/140 (7%)
Frame = +3
Query: 504 PRQQNMIDWIQEEWLQCCGVEGPKDWDRNAYFNCSSGAAGAREACGVPFSCCRNKPQDII 683
P Q +ID +QE W+ CCG+ G DWDRN YF+ + + EA GVPFSCC N +
Sbjct: 161 PDLQLLIDSMQETWM-CCGINGADDWDRNTYFSIEAREVASPEAGGVPFSCCINSSKLEF 219
Query: 684 RNKQCGYDVRKSPDTLEIAKI-----------IYDKGSSKQPRSGSNTTCXXXXXXXYVS 830
+N CG+ VR P++ A + IY +G + + N +
Sbjct: 220 KNYFCGHGVRLKPESHMAAHLAAQRVMAHTASIYTEGCLPKLQLWLNNNMLLVAVSMVII 279
Query: 831 LLHKSWGICFAQNLRADIFA 890
+ + GICFAQNL++DI A
Sbjct: 280 AIIQVLGICFAQNLKSDILA 299
Score = 82.2 bits (194), Expect = 5e-16
Identities = 37/97 (38%), Positives = 57/97 (58%)
Frame = +1
Query: 217 LDRKRHLQQLVPPTNIALDPAFILICVGTITFIIGFTGCVGALRENTCLLACYAVFLALL 396
+++ + L + + LDP + L+ VG +TFIIGF+GCVG+LRENT L Y+ L LL
Sbjct: 65 IEKNTFVNMLSKASKLYLDPTWPLLIVGFLTFIIGFSGCVGSLRENTSFLTFYSTLLGLL 124
Query: 397 LLAEMTTGILFFVFKDWIKQQATTGFQTFIVHYREDP 507
L+AE + G+ + +D + +V YR+DP
Sbjct: 125 LIAEFSAGVFAYACRDQLDNYIRNLLNDVVVGYRDDP 161
Score = 55.6 bits (128), Expect = 4e-08
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = +2
Query: 122 SEVSCCLKYVIFGVNVLFWLVGLIVLAVGVWSWTEKDTFNNL 247
SE+SCC+KY +F NV+F+L+G +L GVW+ EK+TF N+
Sbjct: 32 SEISCCVKYSVFSFNVIFFLLGFGLLLFGVWAQIEKNTFVNM 73
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +1
Query: 283 ILICVGTITFIIGFTGCVGALRENTCLLACYAVFLALLLLAEMTTGILFFVFKDWIKQQA 462
+L+ +G++ ++GF GC GA+REN CL +AV LALL+ E+ I+ + D +
Sbjct: 55 LLLVIGSLCTLLGFLGCCGAIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRLGI 114
Query: 463 TTGFQTFIVHYRE 501
QT +V Y E
Sbjct: 115 GNQLQTGMVRYHE 127
>AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin
family protein 14,isoform a protein.
Length = 427
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Frame = +3
Query: 519 MIDWIQEEWLQCCGV----EGPKDWDRNAYFNCSSGAAGAREACGVPFSCCR 662
++D +QE L+CCGV +G +DW+ + FNC++ E CGVPFSCCR
Sbjct: 157 IMDALQEN-LECCGVSSIAQGYRDWNMSYQFNCTNSNPQP-EKCGVPFSCCR 206
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +1
Query: 259 NIALDPAFILICVGTITFIIGFTGCVGALRENTCLLACYA--VFLALLLLAEMTTGILFF 432
+I L+PA ++ G ++ F G +GALR+N LL C+A VFL+ +L+ +T ++FF
Sbjct: 67 DIILNPAILISIFGFSICVVSFFGFMGALRDNIFLLKCFAACVFLSYILVVAVT--LVFF 124
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/37 (43%), Positives = 28/37 (75%)
Frame = +2
Query: 104 KYRRDTSEVSCCLKYVIFGVNVLFWLVGLIVLAVGVW 214
K R+ E+S CLK+++F +N + +LVG+ +LA+GV+
Sbjct: 18 KQRKPRQEISACLKWLVFLLNSIVFLVGVGILALGVY 54
>AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin
family protein 14,isoform b protein.
Length = 451
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Frame = +3
Query: 519 MIDWIQEEWLQCCGV----EGPKDWDRNAYFNCSSGAAGAREACGVPFSCCR 662
++D +QE L+CCGV +G +DW+ + FNC++ E CGVPFSCCR
Sbjct: 181 IMDALQEN-LECCGVSSIAQGYRDWNMSYQFNCTNSNPQP-EKCGVPFSCCR 230
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +1
Query: 259 NIALDPAFILICVGTITFIIGFTGCVGALRENTCLLACYA--VFLALLLLAEMTTGILFF 432
+I L+PA ++ G ++ F G +GALR+N LL C+A VFL+ +L+ +T ++FF
Sbjct: 91 DIILNPAILISIFGFSICVVSFFGFMGALRDNIFLLKCFAACVFLSYILVVAVT--LVFF 148
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/37 (43%), Positives = 28/37 (75%)
Frame = +2
Query: 104 KYRRDTSEVSCCLKYVIFGVNVLFWLVGLIVLAVGVW 214
K R+ E+S CLK+++F +N + +LVG+ +LA+GV+
Sbjct: 42 KQRKPRQEISACLKWLVFLLNSIVFLVGVGILALGVY 78
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/77 (24%), Positives = 38/77 (49%)
Frame = +1
Query: 277 AFILICVGTITFIIGFTGCVGALRENTCLLACYAVFLALLLLAEMTTGILFFVFKDWIKQ 456
++I+I +G + ++ GC G + L Y++ + LLL+A ++ GI KD +
Sbjct: 114 SYIIIVLGAVMMVVAMLGCCGITGRSRPFLIIYSMVVFLLLVATLSCGIYLLYKKDGLDV 173
Query: 457 QATTGFQTFIVHYREDP 507
+ + + HY + P
Sbjct: 174 ELSDALNYMVQHYYQGP 190
Score = 34.7 bits (76), Expect = 0.090
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 143 KYVIFGVNVLFWLVGLIVLAVGVWSWTEKDTFNNLS 250
KY IF N++F +VG ++LA+GVW T+ N +S
Sbjct: 58 KYGIFTANIVFLIVGGLLLAMGVWLRTDSRFRNFIS 93
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 280 FILICVGTITFIIGFTGCVGALRENTCLLACYAVFLALLLLAEMTTGILFFVFKDWIK 453
+ L+ G I ++G+ GC+GA + N C LA + L L E+ + F ++ IK
Sbjct: 58 WFLVGAGAIIILVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIK 115
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 140 LKYVIFGVNVLFWLVGLIVLAVGVW 214
L+ V F N FWL G++V +G+W
Sbjct: 8 LRIVTFLFNFAFWLSGVVVFGLGIW 32
>U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin family
protein 11 protein.
Length = 317
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +1
Query: 220 DRKRHLQQLVPPTNIALDPAFILICVGTITFIIGFTGCVGALRENTCLLACYAVFLALLL 399
D+ L+ L ++L G I ++ F GC GA +E LL CY+ L L+L
Sbjct: 64 DQDAGLRDLATKPTAVRQFGYLLFVGGFIVIVVAFLGCCGAAKEWRPLLCCYSSCLMLIL 123
Query: 400 LAEMTTGILFFV 435
++ I F+
Sbjct: 124 AIQIAATIYAFL 135
Score = 35.9 bits (79), Expect = 0.039
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +2
Query: 113 RDTSEVSC---CLKYVIFGVNVLFWLVGLIVLAVGVWSWTEKDTFNNLS 250
+ T +SC LK+ +F N++F L GLI L +G+W +K +NL+
Sbjct: 6 QSTMPLSCTARALKFSLFIFNLVFLLCGLICLGIGLWLVLDKYAIDNLA 54
>AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical
protein Y39E4B.4 protein.
Length = 223
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +1
Query: 280 FILICVGTITFIIGFTGCVGALRENTCLLACYAVFLALLLLAEMTTGILFFV 435
+I+I IIGF G +GA+ + LLA Y +F+ +L L E+ GI V
Sbjct: 72 WIIIGFAIANVIIGFVGVIGAVIRSKYLLAPYFLFMVILFLLEIAIGITVLV 123
>U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin family
protein 9 protein.
Length = 233
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 280 FILICVGTITFIIGFTGCVGALRENTCLLACYAVFLALLLLAEM 411
+IL+ VG + F++GF GC GA E+ LL + + +L E+
Sbjct: 69 WILVAVGALLFLVGFFGCCGAGCESPVLLGLFIFIIVILTAVEL 112
>Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein.
Length = 395
Score = 37.1 bits (82), Expect = 0.017
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +1
Query: 253 PTNIALDPAFILICVGTITFIIGFTGCVGALRENTCLLACYAVFLALLLLAEMTTGILFF 432
PT A ++I I +G + ++ GC G + L Y++ + LLL+A ++ GI
Sbjct: 219 PTXFAF--SYIXIVLGAVMMVVAMXGCCGITGRSRPFLIIYSMVVFLLLVATLSCGIYLL 276
Query: 433 VFKD 444
KD
Sbjct: 277 YKKD 280
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 143 KYVIFGVNVLFWLVGLIVLAVGVWSWTEKDTFNNLS 250
KY IF N++F +VG + LA+GVW T+ N +S
Sbjct: 169 KYGIFTANIVFLIVGGLXLAMGVWLRTDSRFRNFIS 204
>U61953-1|AAC48075.2| 569|Caenorhabditis elegans Hypothetical
protein R08C7.6 protein.
Length = 569
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 216 LGQKKTPSTTCPAYKHSFRSSIHTHMCWHNNIHNWLH 326
+G ++ P CP + + S H C HN IH WL+
Sbjct: 466 IGNRRRPD--CPGF---YFHSDPNHQCGHNKIHEWLN 497
>Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical
protein B0198.1 protein.
Length = 279
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 110 RRDTSEVSCCLKYVIFGVNVLFWLVGLIVLAVGVW 214
RR S CC K +F ++ L +VG++ LA+ +W
Sbjct: 15 RRSGSCSGCCSKCQLF-ISYLLVIVGILFLALAIW 48
>Z49071-4|CAA88877.1| 166|Caenorhabditis elegans Hypothetical
protein T22C8.5 protein.
Length = 166
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +3
Query: 222 QKKTPSTTCP---AYKHSFRSSIHTHMC 296
++K TCP A KH R S HTH+C
Sbjct: 52 RRKCERCTCPNCKAIKHGDRGSQHTHLC 79
>U64598-2|AAK39214.2| 558|Caenorhabditis elegans Hypothetical
protein C52B9.4 protein.
Length = 558
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 71 VLCFYKMPGVRKYRRDTSEVSCCLKYVIFGVNVLFWLVGLIVLAV 205
+L FYK+ V V CC+KY + + +W+ G+IVL +
Sbjct: 215 LLRFYKIMCVFYSALALIWVYCCIKYYRDILRIQYWIGGVIVLGM 259
>U61945-5|AAB03128.1| 517|Caenorhabditis elegans Hypothetical
protein C49C8.1 protein.
Length = 517
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 479 RSSSTIEKTPSTKHDRLDPRRMAPVLRRRGSQ 574
+S + K PSTK L P R P+L R+ Q
Sbjct: 200 KSKTLPSKGPSTKSKDLKPGRSKPILNRKAEQ 231
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
F21C10.7 protein.
Length = 2541
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 447 DKTTGHDWISNVHRPL*RRPRQQNM 521
+ T+G W+ NVH+ L RRP Q +
Sbjct: 1938 ETTSGEGWVQNVHQDL-RRPEQSTV 1961
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,809,588
Number of Sequences: 27780
Number of extensions: 505713
Number of successful extensions: 1670
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1665
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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