Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0598
(817 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 103 2e-22
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 99 2e-21
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 81 1e-15
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 42 8e-04
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744... 41 0.001
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 40 0.002
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151... 40 0.003
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 31 1.1
01_06_1331 + 36373059-36373338,36374190-36374263,36374530-363746... 29 5.8
08_02_1105 + 24344656-24345513,24346774-24347149,24348089-24348204 28 7.7
05_05_0087 - 22291732-22292029,22292967-22293034,22293640-222937... 28 7.7
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 103 bits (247), Expect = 2e-22
Identities = 68/210 (32%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Frame = +1
Query: 178 NPLFEKRPKNFAIGQGIQPTRDLSRL*DGPSISASSARRLYFSVV*KCPLRSTNLPRHWT 357
NPLFEKRPK F IG + P +DL R P + +R K P R
Sbjct: 22 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLD 81
Query: 358 R-LQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPDKHSHQAGR 534
+ L F + + + + ++ +
Sbjct: 82 KNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQ 141
Query: 535 EEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRXTCTCLALTNVG 714
+ +V+ AHDVDPIELV++LPALCRKM VPYCIVKGK+RLG++VH+ T + L LT V
Sbjct: 142 SKAQLVVI-AHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHKKTASVLCLTTVK 200
Query: 715 VL*PRFFFEVVGSHQDNFQRAYEELRKHLG 804
F +++ + + NF ++E+RK G
Sbjct: 201 NEDKLEFSKILEAIKANFNDKFDEVRKKWG 230
Score = 81.0 bits (191), Expect = 1e-15
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = +3
Query: 243 LVQIVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 407
L + V+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLDK A LFK+L KYRPE
Sbjct: 44 LHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPE 98
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 722 DRASSSKSXEAIKTTFNERTRSSASTWGXGV 814
D+ SK EAIK FN++ WG GV
Sbjct: 203 DKLEFSKILEAIKANFNDKFDEVRKKWGGGV 233
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 99 bits (238), Expect = 2e-21
Identities = 47/90 (52%), Positives = 65/90 (72%)
Frame = +1
Query: 535 EEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRXTCTCLALTNVG 714
+ + LVVIAHDVDPIELV++LPALCRKM +PYCIVKGK+RLG++VH+ T + L LT V
Sbjct: 126 QSKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVHKKTASVLCLTTVK 185
Query: 715 VL*PRFFFEVVGSHQDNFQRAYEELRKHLG 804
F +++ + + NF ++E+RK G
Sbjct: 186 NEDKLEFSKILEAIKSNFNDKFDEVRKKWG 215
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = +3
Query: 243 LVQIVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 407
L + VRWPK +RIQRQ+ VL++RLKVPP +NQFT+TLDK ++L++ + E
Sbjct: 45 LHRFVRWPKAVRIQRQRRVLKQRLKVPPALNQFTRTLDKNLGCQKERLLKRAQAE 99
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 178 NPLFEKRPKNFAIGQGIQPTRDLSR 252
NPLFEKRPK F IG + P +DL R
Sbjct: 23 NPLFEKRPKQFGIGGALPPRKDLHR 47
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 722 DRASSSKSXEAIKTTFNERTRSSASTWGXGV 814
D+ SK EAIK+ FN++ WG G+
Sbjct: 188 DKLEFSKILEAIKSNFNDKFDEVRKKWGGGI 218
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 81.0 bits (191), Expect = 1e-15
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = +3
Query: 243 LVQIVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 407
L + V+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLDK A LFK+L KYRPE
Sbjct: 28 LHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPE 82
Score = 61.7 bits (143), Expect = 7e-10
Identities = 56/210 (26%), Positives = 84/210 (40%), Gaps = 1/210 (0%)
Frame = +1
Query: 178 NPLFEKRPKNFAIGQGIQPTRDLSRL*DGPSISASSARRLYFSVV*KCPLRSTNLPRHWT 357
NPLFEKRPK F IG + P +DL R P + +R K P R
Sbjct: 6 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLD 65
Query: 358 R-LQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPDKHSHQAGR 534
+ L F + + + + ++ +
Sbjct: 66 KNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQ 125
Query: 535 EEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRXTCTCLALTNVG 714
+ +V+ AHDVDPIELV++LPALCRKM +VH+ T + L LT V
Sbjct: 126 SKAQLVVI-AHDVDPIELVVWLPALCRKM--------------EIVHKKTASVLCLTTVK 170
Query: 715 VL*PRFFFEVVGSHQDNFQRAYEELRKHLG 804
F +++ + + NF ++E+RK G
Sbjct: 171 NEDKLEFSKILEAIKANFNDKFDEVRKKWG 200
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 722 DRASSSKSXEAIKTTFNERTRSSASTWGXGV 814
D+ SK EAIK FN++ WG GV
Sbjct: 173 DKLEFSKILEAIKANFNDKFDEVRKKWGGGV 203
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 532 REEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL--GALVHRXTCTCLALT 705
R + L +IA ++ PI+++ +P LC + +PY V K L R TC L LT
Sbjct: 57 RRGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYVPSKEDLATAGTTKRPTCCVLVLT 116
>03_02_0321 +
7443835-7443837,7443957-7444077,7444168-7444271,
7445056-7445187,7445285-7445311
Length = 128
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 553 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL--VHRXTCTCLALTNVG 714
VV+A D +P+E++L LP L VPY V K LG V R C +N G
Sbjct: 54 VVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEG 109
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 532 REEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL--GALVHRXTCTCLALT 705
R L VIA ++ PI+++ +P LC + +PY V K L R TC L +T
Sbjct: 57 RRGNKGLCVIAGNISPIDVITHVPILCEEANIPYIYVPSKEDLATAGTTKRPTCCVLVMT 116
>10_01_0125 +
1509642-1509759,1509847-1509950,1510693-1510824,
1510936-1510962
Length = 126
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 553 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL--VHRXTCTCLALTN 708
VV+A D +P+E++L LP L VPY V K LG V R C +N
Sbjct: 52 VVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSN 105
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 275 PHPAPEGCTSASSESAPSDQP 337
P PAPE +A+ E+APSD P
Sbjct: 53 PQPAPEEAPAAAEEAAPSDDP 73
>01_06_1331 +
36373059-36373338,36374190-36374263,36374530-36374699,
36374731-36374822,36375087-36375323,36375922-36375980,
36376462-36376644,36377347-36377437,36377959-36378002,
36378085-36378207
Length = 450
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2
Query: 288 GAGCGYTWAILQSGQVTSWLNA 223
G GCG+ AI +SG++ +W +A
Sbjct: 83 GGGCGFAMAISESGKLLTWGSA 104
>08_02_1105 + 24344656-24345513,24346774-24347149,24348089-24348204
Length = 449
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 294 PSGAGCGYTWAILQSGQVTSWLNALTNSKVL-WPLLEERIHDLLGL 160
P+G+ C ++ GQ T W+N +++ + L +ER+ + L
Sbjct: 205 PAGSSCWLPAGVVSDGQATYWINHGGGDRLMSFDLTDERVATITSL 250
>05_05_0087 -
22291732-22292029,22292967-22293034,22293640-22293723,
22295967-22296010,22296210-22296300,22296452-22296634,
22297594-22297637,22298122-22298355,22298452-22298712,
22298790-22298915,22298993-22299077,22299171-22299244,
22299988-22300186
Length = 596
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2
Query: 321 ALSDDAEVQPSGAGCGYTWAILQSGQVTSW 232
A + DA +G GCG+ A+ + G++ +W
Sbjct: 45 AAAGDAWRDVAGGGCGFAMAVSEQGKLFTW 74
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,006,064
Number of Sequences: 37544
Number of extensions: 416510
Number of successful extensions: 1295
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1295
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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