Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0596
         (938 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VAH7 Cluster: CG1973-PA; n=7; Endopterygota|Rep: CG19...    36   1.5  
UniRef50_UPI00003826C6 Cluster: COG1219: ATP-dependent protease ...    34   6.0  
UniRef50_Q3JXG8 Cluster: Putative uncharacterized protein; n=6; ...    33   7.9  
UniRef50_A7HHV0 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  
UniRef50_A3PHA9 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  

>UniRef50_Q9VAH7 Cluster: CG1973-PA; n=7; Endopterygota|Rep: CG1973-PA
            - Drosophila melanogaster (Fruit fly)
          Length = 873

 Score = 35.9 bits (79), Expect = 1.5
 Identities = 20/69 (28%), Positives = 32/69 (46%)
 Frame = +1

Query: 289  HRPAAHQNSNDSLGGWEDGEFEPIEENADENNASKMDXXXXXXXXXXXXXXXXMEARRSA 468
            H   +  N+N +   W DGEFEP++E+   N  +K+D                +EARR+ 
Sbjct: 803  HLNNSTHNANWNSDSWADGEFEPLDESGFGN--AKLDEARRKREEKKLQRQRELEARRAQ 860

Query: 469  SSPGTYETG 495
             + G  + G
Sbjct: 861  RASGPMKLG 869


>UniRef50_UPI00003826C6 Cluster: COG1219: ATP-dependent protease
           Clp, ATPase subunit; n=1; Magnetospirillum
           magnetotacticum MS-1|Rep: COG1219: ATP-dependent
           protease Clp, ATPase subunit - Magnetospirillum
           magnetotacticum MS-1
          Length = 156

 Score = 33.9 bits (74), Expect = 6.0
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 328 RASRCCSGARRGGAPASSRPCCGR 257
           R+ RCC+G  RGG   S R CC R
Sbjct: 133 RSRRCCAGRGRGGCARSWRRCCSR 156


>UniRef50_Q3JXG8 Cluster: Putative uncharacterized protein; n=6;
           Burkholderia|Rep: Putative uncharacterized protein -
           Burkholderia pseudomallei (strain 1710b)
          Length = 501

 Score = 33.5 bits (73), Expect = 7.9
 Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = +3

Query: 153 RC-RNNRPPKPIWSVPRRRGIT-HNGRIRS*TARTRVRPQHGRLEAGAPPRRA 305
           RC R    P+  W   RRRG     GR+ +     R   QHGR E  A  RRA
Sbjct: 110 RCGRAAHAPRRTWRAARRRGAALRRGRLWAVALPVRSGRQHGRTEGAAGSRRA 162


>UniRef50_A7HHV0 Cluster: Putative uncharacterized protein; n=1;
           Anaeromyxobacter sp. Fw109-5|Rep: Putative
           uncharacterized protein - Anaeromyxobacter sp. Fw109-5
          Length = 249

 Score = 33.5 bits (73), Expect = 7.9
 Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
 Frame = +3

Query: 153 RCRNNRPPKPIWSVPR------RRGITHNGRIRS*TARTRVRPQHGRLEAGAP--PRRAP 308
           R R  RPP+P    PR      RR    +GR  +   R R RP    L+AGAP   RR P
Sbjct: 46  RPRRRRPPRPARRGPRAGRARPRRARPGSGRAAAGPPRARPRPARSPLDAGAPHQVRRGP 105


>UniRef50_A3PHA9 Cluster: Putative uncharacterized protein; n=1;
           Rhodobacter sphaeroides ATCC 17029|Rep: Putative
           uncharacterized protein - Rhodobacter sphaeroides
           (strain ATCC 17029 / ATH 2.4.9)
          Length = 234

 Score = 33.5 bits (73), Expect = 7.9
 Identities = 16/29 (55%), Positives = 18/29 (62%)
 Frame = -2

Query: 328 RASRCCSGARRGGAPASSRPCCGRTRVRA 242
           RASR  S   RG + A+SRPC GR R  A
Sbjct: 109 RASRSTSAIWRGTSSATSRPCAGRRRASA 137


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,952,152
Number of Sequences: 1657284
Number of extensions: 10873798
Number of successful extensions: 30594
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30582
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 86141029997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)