Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0596
         (938 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4434|AAF56933.1|  873|Drosophila melanogaster CG1973-PA...    36   0.080
BT021241-1|AAX33389.1|  780|Drosophila melanogaster RE67575p pro...    29   7.0  
BT015277-1|AAT94506.1|  742|Drosophila melanogaster LD16684p pro...    29   7.0  

>AE014297-4434|AAF56933.1|  873|Drosophila melanogaster CG1973-PA
            protein.
          Length = 873

 Score = 35.9 bits (79), Expect = 0.080
 Identities = 20/69 (28%), Positives = 32/69 (46%)
 Frame = +1

Query: 289  HRPAAHQNSNDSLGGWEDGEFEPIEENADENNASKMDXXXXXXXXXXXXXXXXMEARRSA 468
            H   +  N+N +   W DGEFEP++E+   N  +K+D                +EARR+ 
Sbjct: 803  HLNNSTHNANWNSDSWADGEFEPLDESGFGN--AKLDEARRKREEKKLQRQRELEARRAQ 860

Query: 469  SSPGTYETG 495
             + G  + G
Sbjct: 861  RASGPMKLG 869


>BT021241-1|AAX33389.1|  780|Drosophila melanogaster RE67575p
           protein.
          Length = 780

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +1

Query: 214 LTMDGSDREQREREFVRSTAGSRLEHRPAAHQNSNDSLGGWED 342
           L  D S   Q+  EF+R      +  R   H N ND LGGW D
Sbjct: 226 LYRDHSFTPQKVVEFIRKKIPFNVFKR-IEHDNFNDFLGGWSD 267


>BT015277-1|AAT94506.1|  742|Drosophila melanogaster LD16684p
           protein.
          Length = 742

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +1

Query: 214 LTMDGSDREQREREFVRSTAGSRLEHRPAAHQNSNDSLGGWED 342
           L  D S   Q+  EF+R      +  R   H N ND LGGW D
Sbjct: 188 LYRDHSFTPQKVVEFIRKKIPFNVFKR-IEHDNFNDFLGGWSD 229


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,249,795
Number of Sequences: 53049
Number of extensions: 502501
Number of successful extensions: 1313
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4648779081
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)