Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0595
(459 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 46 2e-06
SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase Ubp4|Schizos... 40 2e-04
SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase Ubp12|Schizo... 37 0.001
SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizos... 35 0.005
SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase Ubp16|Schizo... 35 0.005
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 32 0.037
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 32 0.048
SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase Ubp3|Schizosacc... 30 0.15
SPBC428.13c |mob1||protein kinase regulator Mob1|Schizosaccharom... 30 0.15
SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase Ubp14|Sch... 29 0.45
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 28 0.79
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 27 1.8
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 27 1.8
SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 26 2.4
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 3.2
SPAC17G6.15c |||MTC tricarboxylate transporter|Schizosaccharomyc... 25 7.3
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 25 7.3
SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces ... 24 9.7
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 46.4 bits (105), Expect = 2e-06
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +3
Query: 96 VSVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDD 254
+ + ++W + Y D+E+ ++ K Q+++LT V PERQKV+ KG L+DD
Sbjct: 2 IPIAIRWQGKKY-DLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDD 53
Score = 46.0 bits (104), Expect = 3e-06
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +2
Query: 260 GNFKLTNNALVLVMGSKEEDVPAAPVEQHTFCRRMNEAELATAMDMPXGLINLGNTCYMN 439
G+ + NA +L+MG+ E A P+ E E + P GLINLGNTCYMN
Sbjct: 57 GSVGIKPNATLLMMGTAGELPTAMPIP----AVESVEQEESEDDGYPSGLINLGNTCYMN 112
Query: 440 ATVQCL 457
+TVQ L
Sbjct: 113 STVQML 118
>SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase
Ubp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 39.5 bits (88), Expect = 2e-04
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2
Query: 398 PXGLINLGNTCYMNATVQCL 457
P GL NLGNTCYMN +QCL
Sbjct: 71 PIGLTNLGNTCYMNCVLQCL 90
>SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase
Ubp12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 979
Score = 37.1 bits (82), Expect = 0.001
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 404 GLINLGNTCYMNATVQCL 457
GL NLGNTCYMN+ +QCL
Sbjct: 312 GLSNLGNTCYMNSALQCL 329
>SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase
Ubp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 849
Score = 35.1 bits (77), Expect = 0.005
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2
Query: 404 GLINLGNTCYMNATVQCL 457
GL NLGN+CYMN+ +QC+
Sbjct: 280 GLYNLGNSCYMNSALQCM 297
>SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase
Ubp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 457
Score = 35.1 bits (77), Expect = 0.005
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 311 EEDVPAAPVEQHTFCRRMNEAELATAMDMPXGLINLGNTCYMNATVQCL 457
+ED P + F E M GL+NLGNTC+MN+ +Q +
Sbjct: 95 DEDPAFIPPARILFPEEKLSMEWDNIMPNAPGLVNLGNTCFMNSVLQLM 143
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 32.3 bits (70), Expect = 0.037
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 383 TAMDMPXGLINLGNTCYMNATVQ 451
+++D P GL N GN CY+N+ +Q
Sbjct: 608 SSLDTPIGLENTGNLCYLNSLIQ 630
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 31.9 bits (69), Expect = 0.048
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = +3
Query: 87 MPNVSVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDD 254
M N+S+ +K + V V+++ + K I + ++ ERQ+++ G L+D+
Sbjct: 1 MTNISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDE 56
>SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase
Ubp3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 30.3 bits (65), Expect = 0.15
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 398 PXGLINLGNTCYMNATVQCL 457
P G IN GN C+MN+ +Q L
Sbjct: 132 PRGFINTGNICFMNSILQAL 151
>SPBC428.13c |mob1||protein kinase regulator
Mob1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 30.3 bits (65), Expect = 0.15
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 167 YRFIVCIHLHVWVHFLAPFYLH*NVRHFGLFC 72
Y I C H HV V YL+ + +HF FC
Sbjct: 157 YAHIYCSHFHVMVAMELESYLNTSFKHFVFFC 188
>SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase
Ubp14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 28.7 bits (61), Expect = 0.45
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 404 GLINLGNTCYMNATVQCL 457
GL NLGN+CY+ +T+Q L
Sbjct: 301 GLKNLGNSCYLASTMQSL 318
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 27.9 bits (59), Expect = 0.79
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 404 GLINLGNTCYMNATVQCL 457
GL NLG TC+ N+T+Q L
Sbjct: 209 GLKNLGATCFFNSTLQVL 226
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 26.6 bits (56), Expect = 1.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 404 GLINLGNTCYMNATVQCL 457
GL N G TCYMN+ +Q L
Sbjct: 231 GLKNQGATCYMNSLLQSL 248
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 26.6 bits (56), Expect = 1.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 404 GLINLGNTCYMNATVQCL 457
GL N G TCYMN+ +Q L
Sbjct: 214 GLKNQGATCYMNSLLQSL 231
>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 585
Score = 26.2 bits (55), Expect = 2.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 383 TAMDMPXGLINLGNTCYMNATVQCL 457
T D GL N GNTCY+++ + L
Sbjct: 35 TLTDRFYGLTNYGNTCYVSSVLVSL 59
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 3.2
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 339 STGAAGTSSSLLPMTST 289
ST + GTSSS LP TST
Sbjct: 321 STSSTGTSSSPLPSTST 337
>SPAC17G6.15c |||MTC tricarboxylate transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 325
Score = 24.6 bits (51), Expect = 7.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 424 VTQVDETXWHIHGCSQFSFIHSSTKRVLF 338
+ Q+DET WH S +H TK +F
Sbjct: 57 IAQLDETVWHAKKIVD-STLHPDTKEPVF 84
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 24.6 bits (51), Expect = 7.3
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 257 WGNFKLTNNALVLVMGSKEEDVPAAPVEQH 346
W ++ L N V + EE +P+A EQ+
Sbjct: 1654 WHSWALANFEAVKFLEQSEEQIPSAAYEQY 1683
>SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 862
Score = 24.2 bits (50), Expect = 9.7
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 121 LPHFTFTETLGISGYFARSPFQKLYLN 41
L H T T G S F +SP + LYLN
Sbjct: 250 LEHILRTNTNG-SKIFTKSPVKNLYLN 275
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,846,685
Number of Sequences: 5004
Number of extensions: 36543
Number of successful extensions: 91
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 172312850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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