Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0594
         (621 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    24   0.89 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   3.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   4.8  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   8.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   8.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.3  

>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 303 HRS*RRQAPGSMEPYQHTRLRDRLQLRR 220
           H+S RR+AP S E  QH R+   ++ R+
Sbjct: 81  HKS-RRKAPQSFEDIQHQRVMANVRERQ 107


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 592 VSPSTSPVVRKATPFRVPPAA 530
           ++ + +P+VR   P R PP A
Sbjct: 279 ITSAATPLVRSYAPERYPPLA 299


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 607 NSPNLVSPSTSPVVRK 560
           N PN  +PSTS  V++
Sbjct: 32  NVPNFAAPSTSTAVQR 47


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 443 HRRLLSGSRPETANRSHHAQAGTLPMNQG 529
           HR LL  S+    N + H    ++  N+G
Sbjct: 23  HRNLLDWSKTSLDNATEHKLPISMRFNEG 51


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +3

Query: 342  CVNYYLCN 365
            C  YYLCN
Sbjct: 2249 CAQYYLCN 2256


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 443 HRRLLSGSRPETANRSHHAQAGTLPMNQG 529
           HR LL  S+    N + H    ++  N+G
Sbjct: 23  HRNLLDWSKTSLDNATEHKLPISMRFNEG 51


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 493 SRPGRNPANEPG 528
           S+PG  P+ EPG
Sbjct: 227 SKPGTPPSGEPG 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,675
Number of Sequences: 336
Number of extensions: 2842
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)