Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0594
(621 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g09000.1 68416.m01053 proline-rich family protein 40 0.002
At4g19830.1 68417.m02907 immunophilin / FKBP-type peptidyl-proly... 30 1.4
At1g71530.2 68414.m08270 protein kinase family protein contains ... 30 1.4
At1g71530.1 68414.m08269 protein kinase family protein contains ... 30 1.4
At3g23540.1 68416.m02962 expressed protein ; expression supporte... 29 1.9
At5g47460.1 68418.m05861 pentatricopeptide (PPR) repeat-containi... 28 4.3
At3g24550.1 68416.m03083 protein kinase family protein contains ... 28 4.3
At5g65090.1 68418.m08187 endonuclease/exonuclease/phosphatase fa... 28 5.7
At3g54320.1 68416.m06003 ovule development protein, putative sim... 28 5.7
At3g28650.1 68416.m03576 DC1 domain-containing protein similar ... 28 5.7
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 39.5 bits (88), Expect = 0.002
Identities = 39/141 (27%), Positives = 58/141 (41%), Gaps = 14/141 (9%)
Frame = +1
Query: 232 QPVTQPSVLIGLHRPWCLASLRTMTFRARPPTAKKGSASTITCAMRPI----------TP 381
+P T S + GL RP S R+ + RP T + S + T RP+ TP
Sbjct: 133 KPQTSSSSVAGLRRPSSSGSSRSTS---RPATPTRRSTTPTTSTSRPVTTRASNSRSSTP 189
Query: 382 LSLTEQTSSI*ESAVARVHRTSTSA----VWLPTRDRQQIPSRPGRNPANEPGLRLAEP* 549
S T++ ++ A T+TS+ PTR + S + P + P P
Sbjct: 190 TSRATLTAARATTSTAAPRTTTTSSGSARSATPTRSNPRPSSASSKKPVSRPATPTRRPS 249
Query: 550 TALPSGPRATWTARPSSESSP 612
T P+GP + PS +SP
Sbjct: 250 T--PTGPSIVSSKAPSRGTSP 268
>At4g19830.1 68417.m02907 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein similar to 70 kDa
peptidylprolyl isomerase (Peptidylprolyl cis-trans
isomerase) (PPiase) (Rotamase) (SP:Q43207) [Triticum
aestivum]; FKBP-type peptidyl-prolyl cis-trans
isomerase,Synechocystis sp., PIR2:S75144; contains Pfam
PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type
Length = 229
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 289 SLRTMTFRARPPTAKKGSASTITCAMRPITPLSLTEQTSSI 411
SLR R+ P++ S+ST+ A R LS+ TSS+
Sbjct: 26 SLRIFASRSSAPSSSSSSSSTVAAASRRSISLSIIAVTSSV 66
>At1g71530.2 68414.m08270 protein kinase family protein contains
Serine/Threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 463
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 457 VWLPTRD-RQQIPSRPGRNPANEPGLRLAEP*TALPSGPRATWTARPSSESSPGW 618
V PTR+ +++ + P PA + R+ T LP+ +W A + E+ GW
Sbjct: 85 VGAPTRNPTRRVTAIPVAQPAQQQPARVISNKTELPAAEWPSWLASVAGEAIKGW 139
>At1g71530.1 68414.m08269 protein kinase family protein contains
Serine/Threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 463
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 457 VWLPTRD-RQQIPSRPGRNPANEPGLRLAEP*TALPSGPRATWTARPSSESSPGW 618
V PTR+ +++ + P PA + R+ T LP+ +W A + E+ GW
Sbjct: 85 VGAPTRNPTRRVTAIPVAQPAQQQPARVISNKTELPAAEWPSWLASVAGEAIKGW 139
>At3g23540.1 68416.m02962 expressed protein ; expression supported
by MPSS
Length = 568
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 382 LSLTEQTSSI*ESAVARVHRTSTSAVWLP-TRDRQQIPSRPGRNPANEPGLRLAEP*TAL 558
L+ + SS ES R +++ T + P TR + Q+PS NP +E LA T+
Sbjct: 458 LNAVQCISSREESTSTRANQSETDSASSPVTRSQDQLPSSSESNPPSETSSSLARTVTSS 517
Query: 559 PSG 567
G
Sbjct: 518 VPG 520
>At5g47460.1 68418.m05861 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 576
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 500 GRDGICWRSLVGSQTADVDVR*TRATADSYID 405
G DG+ WR+L+G+ +A D++ + A I+
Sbjct: 488 GYDGVAWRALLGACSARKDLKAAKTVAAKMIE 519
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 28.3 bits (60), Expect = 4.3
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Frame = +1
Query: 322 PTAKKGSASTITCAMRPITPLSLTEQTSSI*ESAVARVHRTSTSAVWLPTRDRQQIPSRP 501
P++ S ST + + P +PL + S S + + S SA P+ PS
Sbjct: 40 PSSPPPSPSTNSTSPPPSSPLPPSLPPPSPPGSLTPPLPQPSPSAPITPSPPSPTTPS-- 97
Query: 502 GRNPANEPGLRLAEP*TALPSGPRATWTARPS--SESSPGWS 621
NP + P P T S PR +PS S+SS G S
Sbjct: 98 --NPRSPPSPNQGPPNTPSGSTPRTPSNTKPSPPSDSSDGLS 137
>At5g65090.1 68418.m08187 endonuclease/exonuclease/phosphatase
family protein similar to inositol polyphosphate
5-phosphatase I (GI:10444261) and II (GI:10444263)
[Arabidopsis thaliana]; contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 529
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -1
Query: 195 LMIDSRSPVSMFCAHADA--RKPMNRSLYIFGYYSQNITLTISNSQCSS*SNR 43
L+++ P + + A KP S+Y YS + T T S+S C S +R
Sbjct: 122 LVVEDNEPAAKWLALISQALNKPKQESVYSNAAYSASRTTTCSSSSCGSEESR 174
>At3g54320.1 68416.m06003 ovule development protein, putative
similar to ovule development protein aintegumenta
(GI:1209099) [Arabidopsis thaliana]
Length = 427
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 334 KGSASTITCAMRPITPLSLTEQTSSI*ESAVARVHRTSTSAVWLPTRDRQQIPSRP 501
K +T TC+ P + +S + TSS +S R R + P+ D+ P+ P
Sbjct: 2 KKRLTTSTCSSSPSSSVSSSTTTSSPIQSEAPRPKRAKRAKKSSPSGDKSHNPTSP 57
>At3g28650.1 68416.m03576 DC1 domain-containing protein similar to
hypothetical protein GI:4204272 from [Arabidopsis
thaliana] contains weak PHD zinc finger motifs contains
weak PHD zinc finger motifs DC1 domain, a divergent
protein kinase C domain of unknown function.
Length = 665
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 473 ETANRSHHAQAGTLPMNQGCGWRNPER 553
ETAN +H ++ GC RNPER
Sbjct: 203 ETANLLYHCDMCMFNLDIGCAIRNPER 229
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,373,868
Number of Sequences: 28952
Number of extensions: 265762
Number of successful extensions: 749
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1255974912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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