Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0592
(743 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 130 2e-40
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 122 3e-28
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 9e-19
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 90 2e-18
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 87 1e-17
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 87 1e-17
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 86 2e-17
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 83 3e-16
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 9e-16
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 79 3e-15
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 79 4e-15
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 6e-14
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 73 3e-13
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 71 1e-12
SB_732| Best HMM Match : AAA (HMM E-Value=0) 68 7e-12
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 9e-12
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 65 5e-11
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 55 5e-08
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_6656| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 39 0.004
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 36 0.035
SB_11032| Best HMM Match : AAA (HMM E-Value=3.5) 35 0.080
SB_54124| Best HMM Match : AAA (HMM E-Value=7.8e-08) 34 0.14
SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08) 32 0.43
SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) 31 0.75
SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_57268| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_51808| Best HMM Match : OmpA (HMM E-Value=0.72) 28 7.0
SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49) 28 7.0
SB_44158| Best HMM Match : OmpA (HMM E-Value=0.72) 28 7.0
SB_42682| Best HMM Match : OmpA (HMM E-Value=0.72) 28 7.0
SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_25694| Best HMM Match : RVT_1 (HMM E-Value=1.9e-22) 28 7.0
SB_4259| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 28 7.0
SB_36695| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_19755| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_16760| Best HMM Match : OmpA (HMM E-Value=0.72) 28 7.0
SB_15796| Best HMM Match : RVT_1 (HMM E-Value=0.00082) 28 7.0
SB_59625| Best HMM Match : P19Arf_N (HMM E-Value=5.1) 28 9.2
SB_380| Best HMM Match : AAA (HMM E-Value=0.14) 28 9.2
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 130 bits (315), Expect(2) = 2e-40
Identities = 61/70 (87%), Positives = 66/70 (94%)
Frame = +2
Query: 248 KTFVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEIL 427
+ VSQLLTLMDG+K+ SHVIVMAATNRPNS+D ALRRFGRFDRE+DIGIPDATGRLEIL
Sbjct: 179 RRIVSQLLTLMDGLKQRSHVIVMAATNRPNSVDVALRRFGRFDREVDIGIPDATGRLEIL 238
Query: 428 RIHTKNMKLG 457
RIHTKNMKLG
Sbjct: 239 RIHTKNMKLG 248
Score = 90.2 bits (214), Expect = 2e-18
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L YGPPG GKTL+A+A+ANE A F I GPE+++ GESE+N+R F++A +P
Sbjct: 346 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARSAAPC 405
Query: 183 IIFIDELDAIAPKREKTHGE 242
++F DELD+IA R G+
Sbjct: 406 VLFFDELDSIAKSRGGNVGD 425
Score = 54.8 bits (126), Expect = 7e-08
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPD 403
++Q+LT MDGM +V ++ ATNRP+ IDPA+ R GR D+ I I +PD
Sbjct: 434 INQVLTEMDGMNVKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 482
Score = 53.6 bits (123), Expect(2) = 2e-40
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = +2
Query: 551 RFREKMDLIDLEDDQIDAEVLNSLAVSMDNF 643
+ REKMDLIDLED+ IDAEVL+SLAVSMD+F
Sbjct: 255 QIREKMDLIDLEDETIDAEVLDSLAVSMDDF 285
Score = 51.6 bits (118), Expect = 7e-07
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3
Query: 642 FRYAMTXSSPSALRETVVEVPNVTWTDI 725
FRYAM S+PSALRETVVEVPNV+W DI
Sbjct: 285 FRYAMGVSNPSALRETVVEVPNVSWDDI 312
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 122 bits (294), Expect = 3e-28
Identities = 54/84 (64%), Positives = 67/84 (79%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL+YGP GTGKT+IARAVANETG FF INGPE++S+ GE+E+ LR+ F EA SP+
Sbjct: 292 GILLYGPSGTGKTMIARAVANETGVHFFCINGPEVLSRYYGETEARLREIFTEAQNKSPS 351
Query: 183 IIFIDELDAIAPKREKTHGEVERR 254
I+FIDELDA+ P+R+K E ERR
Sbjct: 352 IVFIDELDALCPRRDKVQNEFERR 375
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/79 (58%), Positives = 56/79 (70%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GILMYGPPG KTLIARA+A E+G F I GPE+ SK GESE +R+ F +A +P+
Sbjct: 573 GILMYGPPGCSKTLIARALATESGLNFIAIKGPELFSKWVGESEKAVREVFLKARATAPS 632
Query: 183 IIFIDELDAIAPKREKTHG 239
I+F DELDAIA +R T G
Sbjct: 633 IVFFDELDAIAGQRNSTGG 651
Score = 79.0 bits (186), Expect = 4e-15
Identities = 41/67 (61%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSS---HVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEIL 427
V+ LLTLMDGM S +V+V+AATNRP+++DPALRR GRFDREI+IGIP T R +IL
Sbjct: 377 VATLLTLMDGMHMKSTDTYVMVLAATNRPDALDPALRRPGRFDREIEIGIPSVTDRRDIL 436
Query: 428 RIHTKNM 448
KN+
Sbjct: 437 VTLLKNV 443
Score = 55.6 bits (128), Expect = 4e-08
Identities = 30/60 (50%), Positives = 39/60 (65%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
++QLLT +DG++ VI +AATNRP+ ID AL R GR DR I + +P R IL IH
Sbjct: 659 LTQLLTELDGVETLKDVIFIAATNRPDMIDKALMRPGRVDRLIYVPLPCWDTRRHILEIH 718
Score = 49.2 bits (112), Expect = 3e-06
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Frame = +3
Query: 468 NLEQIAAESHGHVGADLASLCSEGSLAADFVRRWISLTSRTIR-LTQRFSILWLSPWIT- 641
++ +A +HG+VGADLA+ C E SL A F R + + + + L QR + + ++
Sbjct: 451 DISSLAESAHGYVGADLAAACKEASLYA-FKRSLHNHDNGSSQSLEQRDARIKRELLVSS 509
Query: 642 --FRYAMTXSSPSALRETVVEVPNVTWTDI 725
R A PSA+RE +EVP V W+D+
Sbjct: 510 EDMRAAFRCVRPSAMREVALEVPKVHWSDV 539
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 456 ETTSNLEQIAAESHGHVGADLASLCSEGSLAA 551
E + +LE + + G+ GA++A++C E +LAA
Sbjct: 725 EGSLDLEDLVERTEGYSGAEIAAVCREAALAA 756
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 93.1 bits (221), Expect = 2e-19
Identities = 39/77 (50%), Positives = 55/77 (71%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+YGPPGTGKTL+A+AVA E F + GPE+++ G+SE N+R+ F A SP
Sbjct: 846 GVLLYGPPGTGKTLMAKAVATECSLNFLSVKGPELINMYVGQSEQNVREVFSRAQAASPC 905
Query: 183 IIFIDELDAIAPKREKT 233
+IF DELD++AP R ++
Sbjct: 906 VIFFDELDSLAPNRGRS 922
Score = 54.4 bits (125), Expect = 9e-08
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGI-PDATGRLEILRI 433
V+QLL +DG+ + V V+ ATNRP+ +DPAL R GRFD+ + +G+ D +L +L+
Sbjct: 933 VAQLLAELDGLHSTCDVFVIGATNRPDLLDPALLRPGRFDKLLYLGVSEDHHAQLSVLKA 992
Query: 434 HTK 442
T+
Sbjct: 993 LTR 995
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 91.1 bits (216), Expect = 9e-19
Identities = 44/81 (54%), Positives = 55/81 (67%)
Frame = +2
Query: 212 CTKERENPR*SGKTFVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDI 391
C K + V+QLLTLMDG++ VIV+ ATNRPN++DPALRR GRFDRE+ I
Sbjct: 320 CPKRGSSGNEEENRIVAQLLTLMDGLESRGRVIVIGATNRPNALDPALRRPGRFDREVVI 379
Query: 392 GIPDATGRLEILRIHTKNMKL 454
G+P A RL+ILR H K + L
Sbjct: 380 GVPSAGQRLDILRAHCKPINL 400
Score = 74.1 bits (174), Expect = 1e-13
Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE---ADKN 173
GIL+ G PG GKTL+ + G NG ++ AGESE NLR+ F + A +
Sbjct: 247 GILLVGAPGVGKTLLVHKATVDCGIKLVSTNGTDVFGPHAGESEENLRRVFNKARYASRF 306
Query: 174 SPAIIFIDELDAIAPKREKTHGEVERR 254
P ++FIDELDA+ PKR + E E R
Sbjct: 307 GPCVLFIDELDALCPKRGSSGNEEENR 333
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/79 (37%), Positives = 45/79 (56%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+YGPPG KT + RA A+ T F ++ ++ S G++E LR E P
Sbjct: 520 GVLLYGPPGCCKTTLVRAAASSTHCTFMSLSCAQLFSSYVGDAERTLR----ELVLQLPL 575
Query: 183 IIFIDELDAIAPKREKTHG 239
++F+DELD++A KR G
Sbjct: 576 LLFLDELDSLAGKRGNNLG 594
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/46 (56%), Positives = 33/46 (71%)
Frame = +2
Query: 305 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 442
+I++AATNRP +ID AL R GR D I + PD RLEILR+HT+
Sbjct: 699 LILVAATNRPEAIDGALLRPGRIDCMIYVPPPDMKARLEILRVHTR 744
Score = 33.1 bits (72), Expect = 0.24
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +3
Query: 468 NLEQIAAESHGHVGADLASLCSEGSLAADFVRRWISLTSRTIRLTQRFSILWLSPWITFR 647
+L +A + G+VGADLASLC + + AA ++R SL + + L F+
Sbjct: 405 DLTHLAEITVGYVGADLASLCQQAAFAA--LKR--SLAKN--KSGNKVKSLHTVKMSDFQ 458
Query: 648 YAMTXSSPSALR--ETVVEVPNVTWTDI 725
AM + PS + E VV + W D+
Sbjct: 459 LAMCHTVPSTHKGMEGVVRLQPTRWDDV 486
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 90.2 bits (214), Expect = 2e-18
Identities = 37/74 (50%), Positives = 55/74 (74%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL+ GPPG GKTL+A+A+ANE+G F + GPE+++ GESE +R+ F+ A ++P
Sbjct: 19 GILLAGPPGCGKTLLAKAIANESGINFISVKGPELLNMYVGESERAVRQVFQRARNSAPC 78
Query: 183 IIFIDELDAIAPKR 224
+IF DELD++ P+R
Sbjct: 79 VIFFDELDSLCPRR 92
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSID 346
V+QLLT MDG++ HV +M ATN+P D
Sbjct: 105 VNQLLTEMDGLQARKHVFIMGATNKPGIRD 134
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 87.4 bits (207), Expect = 1e-17
Identities = 39/74 (52%), Positives = 49/74 (66%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+YGPPGTGKTL+A VA E G F I GPE++SK G SE +R F A P
Sbjct: 703 GLLLYGPPGTGKTLLAGVVAKECGLNFISIKGPELLSKYIGASEQAVRDMFTRAQSAKPC 762
Query: 183 IIFIDELDAIAPKR 224
I+F DE D++AP+R
Sbjct: 763 ILFFDEFDSLAPRR 776
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/66 (43%), Positives = 43/66 (65%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
V+QLLT +DG++ V ++AAT+RP+ IDPAL R GR D+ + IPD R E+ R
Sbjct: 788 VNQLLTQLDGVEGLKGVYILAATSRPDLIDPALLRPGRLDKCVYCPIPDQGDRREVFRAL 847
Query: 437 TKNMKL 454
+ ++ L
Sbjct: 848 SHDLPL 853
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 87.4 bits (207), Expect = 1e-17
Identities = 40/84 (47%), Positives = 56/84 (66%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G L++GPPG GKTL+A A+A E F + EI+S ++GESE +R+ F A +P
Sbjct: 712 GFLLHGPPGCGKTLLAHAIAGELEMPFLKLAATEIVSGVSGESEEKVRELFTSAVAQAPC 771
Query: 183 IIFIDELDAIAPKREKTHGEVERR 254
I+F+DE+DAI PKRE ++ERR
Sbjct: 772 ILFLDEIDAITPKRENASKDMERR 795
Score = 76.2 bits (179), Expect = 3e-14
Identities = 39/74 (52%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Frame = +2
Query: 215 TKERENP-R*SGKTFVSQLLTLMDGMKKS--SHVIVMAATNRPNSIDPALRRFGRFDREI 385
T +REN + + VSQLL+ MD + + +HV+V+ ATNRP+S+DPALRR GRFDREI
Sbjct: 782 TPKRENASKDMERRIVSQLLSCMDDLNNNPDAHVLVIGATNRPDSLDPALRRAGRFDREI 841
Query: 386 DIGIPDATGRLEIL 427
+GIPD + R I+
Sbjct: 842 SMGIPDESARARIV 855
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 651 AMTXSSPSALRETVVEVPNVTWTDI 725
A+ + PSA RE VP+VTW ++
Sbjct: 937 ALAVTQPSAKREGFATVPDVTWANV 961
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 86.2 bits (204), Expect = 2e-17
Identities = 40/74 (54%), Positives = 52/74 (70%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+YGPPG GKT++A+AVA+ T A F + G E + K GE +R F A +N+PA
Sbjct: 200 GVLLYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPA 259
Query: 183 IIFIDELDAIAPKR 224
IIFIDE+DAIA KR
Sbjct: 260 IIFIDEIDAIATKR 273
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = +2
Query: 263 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 442
+LL MDG ++ +V V+ ATNR +++DPAL R GR DR+I+ +PD + I T
Sbjct: 290 ELLNQMDGFDQNVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITN 349
Query: 443 NMKL 454
M L
Sbjct: 350 KMNL 353
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEAD 167
G+L +GPPGTGKTL+ARA+ANE FF+ G + +SK GESE LR F++A
Sbjct: 920 GVLFFGPPGTGKTLVARALANECSQGDKKVSFFMRKGADCLSKWVGESERQLRLLFDQAY 979
Query: 168 KNSPAIIFIDELDAIAPKREKTHGEV 245
P+IIF DE+D +AP R ++
Sbjct: 980 AMRPSIIFFDEIDGLAPVRSSRQDQI 1005
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/64 (53%), Positives = 43/64 (67%)
Frame = +2
Query: 251 TFVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILR 430
+ VS LL LMDG+ V+++ ATNR ++IDPALRR GRFDRE +PD R IL
Sbjct: 1008 SIVSTLLALMDGLDSRGEVVIIGATNRIDAIDPALRRPGRFDREFQFALPDRDARRSILS 1067
Query: 431 IHTK 442
IHT+
Sbjct: 1068 IHTR 1071
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 81.0 bits (191), Expect = 9e-16
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+LM GPPGTGKT++A+AVA E G FF ++ + SK GESE +R FE A +P+
Sbjct: 285 GVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRILFEMARFYAPS 344
Query: 183 IIFIDELDAIAPKR-EKTHGEVERR 254
IF+DE+D+I +R + E RR
Sbjct: 345 TIFVDEIDSICSRRGSDSEHEASRR 369
Score = 34.7 bits (76), Expect = 0.080
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Frame = +2
Query: 260 SQLLTLMDGMKKSS------HVIVMAATNRPNSIDPALRRFGRFDREIDIGIP 400
S+LL MDG+ SS V+V+AATN P +D ALRR R ++ I I +P
Sbjct: 372 SELLVQMDGVGGSSDDGETKQVMVLAATNFPWDLDEALRR--RLEKRIYIPLP 422
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 79.4 bits (187), Expect = 3e-15
Identities = 36/74 (48%), Positives = 48/74 (64%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G ++ GPPGTGKTL+A+AVA E G F I+G E + G + +R F +A KN+P
Sbjct: 83 GAILSGPPGTGKTLLAKAVAGEAGVPFLSISGSEFLEMFVGVGPARVRDLFAQARKNAPC 142
Query: 183 IIFIDELDAIAPKR 224
IIFIDE+DA+ R
Sbjct: 143 IIFIDEIDAVGRAR 156
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/65 (49%), Positives = 46/65 (70%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
++QLL MDG S++V+V++ TNRP+ +DPAL R GRFDR+I + PD GR I ++H
Sbjct: 172 LNQLLVEMDGFSSSTNVVVLSGTNRPDVLDPALLRPGRFDRQIHLPAPDIKGRCSIFKVH 231
Query: 437 TKNMK 451
K +K
Sbjct: 232 LKPIK 236
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/74 (50%), Positives = 47/74 (63%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L++GPPGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A
Sbjct: 120 GVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKAC 179
Query: 183 IIFIDELDAIAPKR 224
I+F DE+DAI R
Sbjct: 180 IVFFDEIDAIGGAR 193
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/47 (44%), Positives = 34/47 (72%)
Frame = +2
Query: 263 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPD 403
+L+ +DG ++ V+ ATNRP+++DPAL R GR DR+++ G+PD
Sbjct: 210 ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPD 256
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 74.9 bits (176), Expect = 6e-14
Identities = 34/74 (45%), Positives = 46/74 (62%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+ G PGTGKTL+A+AVA E G FF +G E G + +R F A +++P
Sbjct: 166 GVLLIGSPGTGKTLLAKAVAGEAGVPFFFCSGSEFDEMFVGVGAARVRNLFAAAKEHAPC 225
Query: 183 IIFIDELDAIAPKR 224
I+F+DELDAI R
Sbjct: 226 IVFVDELDAIGGSR 239
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/79 (41%), Positives = 50/79 (63%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+YGPPG KT + RA A+ T F ++ ++ S G++E LR+ F +A +PA
Sbjct: 49 GVLLYGPPGCCKTTLVRAAASSTHCTFMSLSCAQLFSSYVGDAERTLRELFLKARATAPA 108
Query: 183 IIFIDELDAIAPKREKTHG 239
I+F+DELD++A KR G
Sbjct: 109 ILFLDELDSLAGKRGNNLG 127
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/46 (56%), Positives = 33/46 (71%)
Frame = +2
Query: 305 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 442
+I++AATNRP +ID AL R GR D I + PD RLEILR+HT+
Sbjct: 232 LILVAATNRPEAIDGALLRPGRIDCMIYVPPPDMKARLEILRVHTR 277
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/77 (42%), Positives = 47/77 (61%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G L+ GPPGTGKTL+A+AVA E F + G + + AG + +R F A K +P
Sbjct: 160 GALLVGPPGTGKTLLAKAVATEADVPFLSMAGSDFVEMFAGVGSARVRDLFTRARKLAPC 219
Query: 183 IIFIDELDAIAPKREKT 233
I++IDE+DAI R+ +
Sbjct: 220 IVYIDEVDAIGRSRKSS 236
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/66 (46%), Positives = 42/66 (63%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
++QLL MDGM VI++A+TNR + +D AL R GRFDR I I +P R+EI +H
Sbjct: 249 LNQLLVEMDGMNTLDGVIMLASTNRADILDNALLRPGRFDRHIAIDLPTLPERMEIFEVH 308
Query: 437 TKNMKL 454
K + L
Sbjct: 309 LKKLTL 314
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 474 EQIAAESHGHVGADLASLCSEGSLAA 551
+++A + GH GAD+A++C+E +L A
Sbjct: 323 KRLAELTPGHSGADIANICNEAALHA 348
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 68.1 bits (159), Expect = 7e-12
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 9/83 (10%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFF-FLINGPEIMSKLAGESESNLRKAFEEA----- 164
GIL++GPPGTGKTL+AR + +I+GPE+++K GESE+N+RK F EA
Sbjct: 184 GILLFGPPGTGKTLMARQIGTMLNTREPKIISGPEVLNKFVGESEANIRKLFAEAEEEQK 243
Query: 165 ---DKNSPAIIFIDELDAIAPKR 224
D ++ +I DE DA+ R
Sbjct: 244 RFGDNSALHLIIFDEFDAVCKSR 266
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/65 (44%), Positives = 49/65 (75%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
V+QLL +DG+++ ++V+++ TNR + ID AL R GR + +++IG+PD GR++IL+IH
Sbjct: 281 VNQLLAKIDGVEQLNNVLLIGMTNRRDLIDDALLRPGRLEVQVEIGLPDEEGRVQILKIH 340
Query: 437 TKNMK 451
T M+
Sbjct: 341 TAKMR 345
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 67.7 bits (158), Expect = 9e-12
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 14/88 (15%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA---------- 152
G+L+YGPPGTGKTL+ARAVA+ T F ++G E++ K GE +R+
Sbjct: 213 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMARHGENL 272
Query: 153 ----FEEADKNSPAIIFIDELDAIAPKR 224
F ++ +++P+IIF+DE+D+I R
Sbjct: 273 QAMYFVDSREHAPSIIFMDEIDSIGSSR 300
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +2
Query: 263 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATG 412
+LL +DG + + ++ V+ ATNR + +D AL R GR DR+I+ P+ G
Sbjct: 317 ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEG 366
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 65.3 bits (152), Expect = 5e-11
Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Frame = +3
Query: 27 GTGKTLIARAVANETG-AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDEL 203
GTGK+ +A+AVA E + F ++ +++SK GESE +++ FE A +N P+IIFIDE+
Sbjct: 175 GTGKSYLAKAVATEANNSTFISVSSSDLVSKWLGESERLVKQLFELARENKPSIIFIDEV 234
Query: 204 DAIAPKREKTHGEVERR 254
D++ R + E RR
Sbjct: 235 DSLCGSRSENESESARR 251
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 212 CTKERENPR*SGKTFVSQLLTLMDGMK-KSSHVIVMAATNRPNSIDPALRRFGRFDREID 388
C EN S + ++ L M G+ + V+V+ ATN P ++D A+RR RF++ I
Sbjct: 238 CGSRSENESESARRIKTEFLVQMQGVGVDNDQVLVLGATNIPWTLDSAIRR--RFEKRIY 295
Query: 389 IGIPDATGRLEILRIHTKNMK 451
I +P+ R ++ +H K
Sbjct: 296 IPLPEQAARSKMFELHLGGSK 316
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = +2
Query: 263 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 442
+LL +DG + V+AATNR + +DPAL R GR DR+I+ PD R IL+IH++
Sbjct: 219 ELLNQLDGFSSHHDIKVIAATNRVDILDPALLRSGRLDRKIEFPNPDQEARARILQIHSR 278
Query: 443 NMKL 454
M +
Sbjct: 279 KMNV 282
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +3
Query: 102 EIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 224
+I G+ +R AF A + +PAIIFIDELDAI KR
Sbjct: 162 QIQEMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR 202
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAI 185
+L YGPPGTGKT+ A+++A +G + ++ G +++ + E + + K F+ A+ + +
Sbjct: 332 LLFYGPPGTGKTMFAKSLARHSGMDYAVMTGGDVV-PMGKEGVTAMHKVFDWAETSRRGV 390
Query: 186 -IFIDELDAIAPKREKTHGEVERRS 257
+F+DE DA KR + + RS
Sbjct: 391 LLFVDEADAFLRKRSQEKISEDLRS 415
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 113
GIL+ GPPG GKTL+A+A+ANE+G F + GPE+++
Sbjct: 19 GILLAGPPGCGKTLLAKAIANESGINFISVKGPELLN 55
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 52.4 bits (120), Expect = 4e-07
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 116
G+++YG PGTGKTL+A+AVAN+T A F + G E++ K
Sbjct: 416 GVILYGQPGTGKTLLAKAVANQTSATFLRVVGSELIQK 453
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/54 (42%), Positives = 30/54 (55%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 164
GIL+ G PG GKTL+ + G NG ++ AGESE NLR+ F +A
Sbjct: 77 GILLVGAPGVGKTLLVHKATVDCGIKLVSTNGTDVFGPHAGESEENLRRVFNKA 130
>SB_6656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES--ESNLRKAFEEADKNSP 179
+L+ GP G GK ++ + ETGA F + I K G++ L F+ A + P
Sbjct: 210 VLITGPRGVGKKMLVHCICTETGANLFDLTAANIAGKYPGKAGLAMLLHMVFKVARQLQP 269
Query: 180 AIIFIDELDAIAPKR 224
+++FI + + K+
Sbjct: 270 SVVFIGDAERTFVKK 284
>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
Length = 609
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEA----D 167
IL+ GP G+GKTL+A+ +A F + + + + GE ES + K +EA +
Sbjct: 273 ILLLGPTGSGKTLLAQTIARCLDVPFAICDCTALTQAGYVGEDIESVIAKLLQEAGGNVE 332
Query: 168 KNSPAIIFIDELDAI 212
K I+F+DE+D I
Sbjct: 333 KAQQGIVFLDEVDKI 347
>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
Length = 420
Score = 35.9 bits (79), Expect = 0.035
Identities = 23/78 (29%), Positives = 40/78 (51%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G L+YGPPG GK+ +A+A E ++N + ++ L A + S
Sbjct: 224 GYLLYGPPGCGKSSFIQALAGELDYSICVMNLSD-----RSLTDDRLNHLMSVAPQQS-- 276
Query: 183 IIFIDELDAIAPKREKTH 236
II ++++DA KR++T+
Sbjct: 277 IILLEDIDAAFVKRDETN 294
Score = 35.5 bits (78), Expect = 0.046
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +2
Query: 260 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 439
S LL +DG+ S +V TN +DPAL R GR D + +I D R +++R+
Sbjct: 310 SGLLNTLDGVASSEERVVFMTTNHLKRLDPALIRPGRVDFKQEI---DWASRSQLVRMFA 366
Query: 440 K 442
+
Sbjct: 367 R 367
>SB_11032| Best HMM Match : AAA (HMM E-Value=3.5)
Length = 111
Score = 34.7 bits (76), Expect = 0.080
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 123 GESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERR 254
GE E +R F A PA+IF+DE+D++ +R E RR
Sbjct: 2 GEGEKMVRAMFAVARCYLPAVIFMDEIDSLLTQRTDGEHEASRR 45
>SB_54124| Best HMM Match : AAA (HMM E-Value=7.8e-08)
Length = 251
Score = 33.9 bits (74), Expect = 0.14
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVA---NETGAF----FFLINGPEIMSKLAGESESNLRKAFEEA 164
++ G PGTGKT +AR +A +E G + ++ + GE+ + + A + A
Sbjct: 16 VMFVGNPGTGKTTMARMMAGILHEAGVIKRNKVIEVQRTALVGRYIGETGTKTKGAIDRA 75
Query: 165 DKNSPAIIFIDELDAIAPKREKTHGEVERRSFHSY*RLW 281
K S ++ IDE ++ + +K +G + H +W
Sbjct: 76 -KGS--VLLIDEAYRLSSESDKNYGREAAETPHGGDGVW 111
>SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08)
Length = 568
Score = 32.3 bits (70), Expect = 0.43
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 9 LMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 116
L+ GPPG GKT A V E G + +N + SK
Sbjct: 275 LLSGPPGVGKTTTATLVCQELGYSYVEMNASDARSK 310
>SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)
Length = 230
Score = 31.5 bits (68), Expect = 0.75
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANE 68
+L YGPPGTGKT AVA +
Sbjct: 13 LLFYGPPGTGKTSTILAVAKQ 33
>SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 31.5 bits (68), Expect = 0.75
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESES 137
+L+ G PGTGKT IA +A G F I G EI S ++E+
Sbjct: 172 VLIAGQPGTGKTAIAMGMAQSLGPDTPFTSIAGSEIFSLEMSKTEA 217
>SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1931
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +3
Query: 30 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDE 200
+GKTLIARA NE A E+M K A E + KA + A ++ + ++E
Sbjct: 1655 SGKTLIARAGENEGNA--------EVMGKTADELKEKATKAAQNATESKTKALKLEE 1703
>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3367
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 15 YGPPGTGKTLIARAVANETGAFFFLINGPE 104
+GP GTGKT +A+ + G F + N E
Sbjct: 1854 FGPAGTGKTESVKALGQQLGRFVLVFNCDE 1883
>SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 9 LMYGPPGTGKTLIARAVANETG 74
L+ GPPG GKT +A +A G
Sbjct: 384 LLCGPPGLGKTTLAHVIAQHAG 405
>SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 368 RFDREIDIGIPDATGRLEILRIHTKNMKL 454
R DR+I+ +PD + I IHT+ M L
Sbjct: 2 RIDRKIEFPMPDEKTKRRIFNIHTQRMTL 30
>SB_57268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 912
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 320 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLG 457
+T R N +DP +RR R + +I IP T + ++L +IHTK +G
Sbjct: 348 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIG 398
>SB_51808| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 516
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 320 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLG 457
+T R N +DP +RR R + +I IP T + ++L +IHTK +G
Sbjct: 355 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIG 405
>SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49)
Length = 1205
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 320 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLG 457
+T R N +DP +RR R + +I IP T + ++L +IHTK +G
Sbjct: 273 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIG 323
>SB_44158| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 406
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 320 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLG 457
+T R N +DP +RR R + +I IP T + ++L +IHTK +G
Sbjct: 349 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIG 399
>SB_42682| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 296
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 320 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLG 457
+T R N +DP +RR R + +I IP T + ++L +IHTK +G
Sbjct: 65 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIG 115
>SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1151
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +2
Query: 218 KERENPR*SGKTFVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREID 388
KE E + + F+S + +L+D S + + T+R N + +LRR G ++ ++
Sbjct: 210 KETETEQETQNEFISLIKSLLDSPPAKSGSLKIILTSRANVEEQSLRRSGFSEKVVE 266
>SB_25694| Best HMM Match : RVT_1 (HMM E-Value=1.9e-22)
Length = 1797
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 320 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLG 457
+T R N +DP +RR R + +I IP T + ++L +IHTK +G
Sbjct: 283 STKRKNPMDPVIRRRERRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIG 333
>SB_4259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 320 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLG 457
+T R N +DP +RR R + +I IP T + ++L +IHTK +G
Sbjct: 413 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIG 463
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGE 128
G+L+ GP G+GKT + VA+ G PEIM G+
Sbjct: 120 GVLLEGPVGSGKTCLVEHVASMCGR----STPPEIMKVQLGD 157
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETGAFFFLIN 95
IL+ G PG GKT + A+A +G IN
Sbjct: 1620 ILLEGSPGVGKTSLVSAIAKASGHELVRIN 1649
>SB_36695| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 320 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLG 457
+T R N +DP +RR R + +I IP T + ++L +IHTK +G
Sbjct: 355 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIG 405
>SB_19755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 320 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLG 457
+T R N +DP +RR R + +I IP T + ++L +IHTK +G
Sbjct: 283 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIG 333
>SB_16760| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 933
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 320 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLG 457
+T R N +DP +RR R + +I IP T + ++L +IHTK +G
Sbjct: 355 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIG 405
>SB_15796| Best HMM Match : RVT_1 (HMM E-Value=0.00082)
Length = 1304
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 320 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLG 457
+T R N +DP +RR R + +I IP T + ++L +IHTK +G
Sbjct: 702 STKRKNPMDPVIRRRERRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIG 752
>SB_59625| Best HMM Match : P19Arf_N (HMM E-Value=5.1)
Length = 1463
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Frame = -2
Query: 682 RNADGDDXVIAYRKVIHGDSQRIENLCV---NLIVLEV--------NEIHLLTKSAARLP 536
RNADG D R+ +H + + LC+ L+ EV + ++ A +LP
Sbjct: 1008 RNADGKDRSTLQRRHLHNRTTALRRLCLLKRRLLKYEVLHRQYTATIDEYISQDHARQLP 1067
Query: 535 SEHRDARSAPT 503
++H+ + +PT
Sbjct: 1068 TDHQSSDDSPT 1078
>SB_380| Best HMM Match : AAA (HMM E-Value=0.14)
Length = 508
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETGAF 80
+++ GP G GKTL R +A + G F
Sbjct: 122 LMIVGPKGAGKTLHGRELARKLGLF 146
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,420,585
Number of Sequences: 59808
Number of extensions: 402081
Number of successful extensions: 1329
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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