Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0592
(743 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g53230.1 68416.m05865 cell division cycle protein 48, putativ... 164 6e-41
At5g03340.1 68418.m00286 cell division cycle protein 48, putativ... 161 4e-40
At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)... 161 4e-40
At3g56690.1 68416.m06306 calmodulin-binding protein identical to... 97 1e-20
At3g01610.1 68416.m00092 AAA-type ATPase family protein contains... 96 3e-20
At1g03000.1 68414.m00271 AAA-type ATPase family protein contains... 92 3e-19
At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2... 89 4e-18
At3g02450.1 68416.m00232 cell division protein ftsH, putative si... 88 5e-18
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 88 7e-18
At2g20140.1 68415.m02353 26S protease regulatory complex subunit... 86 3e-17
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 85 5e-17
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 85 5e-17
At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc ... 84 8e-17
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 84 8e-17
At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc... 84 8e-17
At1g64110.2 68414.m07264 AAA-type ATPase family protein contains... 84 1e-16
At1g64110.1 68414.m07263 AAA-type ATPase family protein contains... 84 1e-16
At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 83 1e-16
At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, puta... 82 3e-16
At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a) 82 3e-16
At5g15250.1 68418.m01786 FtsH protease, putative similar to FtsH... 82 4e-16
At2g45500.1 68415.m05659 AAA-type ATPase family protein similar ... 82 4e-16
At4g02480.1 68417.m00335 AAA-type ATPase family protein contains... 81 6e-16
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 81 6e-16
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 81 1e-15
At4g27680.1 68417.m03980 MSP1 protein, putative / intramitochond... 81 1e-15
At4g23940.1 68417.m03443 FtsH protease, putative contains simila... 81 1e-15
At3g27120.1 68416.m03393 spastin ATPase, putative similar to SWI... 81 1e-15
At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit, puta... 81 1e-15
At2g34560.2 68415.m04246 katanin, putative similar to katanin p6... 80 1e-15
At2g34560.1 68415.m04245 katanin, putative similar to katanin p6... 80 1e-15
At5g53540.1 68418.m06653 MSP1 protein, putative / intramitochond... 80 2e-15
At4g24860.1 68417.m03559 AAA-type ATPase family protein contains... 80 2e-15
At3g16290.1 68416.m02056 FtsH protease, putative contains simila... 80 2e-15
At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuol... 80 2e-15
At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1... 80 2e-15
At1g50140.1 68414.m05623 AAA-type ATPase family protein contains... 80 2e-15
At2g29080.1 68415.m03535 FtsH protease, putative similar to AAA-... 79 2e-15
At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1... 79 2e-15
At3g19740.1 68416.m02499 AAA-type ATPase family protein contains... 79 4e-15
At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4... 78 5e-15
At2g26140.1 68415.m03137 FtsH protease, putative contains simila... 78 5e-15
At1g45000.1 68414.m05158 26S proteasome regulatory complex subun... 78 5e-15
At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH... 78 7e-15
At1g50250.1 68414.m05634 cell division protein ftsH homolog 1, c... 78 7e-15
At5g53170.1 68418.m06610 FtsH protease, putative similar to ATP-... 77 9e-15
At2g03670.1 68415.m00326 AAA-type ATPase family protein contains... 77 9e-15
At1g07510.1 68414.m00804 FtsH protease, putative similar to AAA-... 77 1e-14
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 74 9e-14
At5g58870.1 68418.m07376 FtsH protease, putative contains simila... 73 2e-13
At3g47060.1 68416.m05110 FtsH protease, putative contains simila... 73 2e-13
At3g15120.1 68416.m01913 AAA-type ATPase family protein contains... 71 6e-13
At4g04910.1 68417.m00714 AAA-type ATPase family protein similar ... 69 4e-12
At1g79560.1 68414.m09275 FtsH protease, putative contains simila... 68 6e-12
At4g04180.1 68417.m00593 AAA-type ATPase family protein contains... 68 8e-12
At1g62130.1 68414.m07010 AAA-type ATPase family protein contains... 64 7e-11
At4g36580.1 68417.m05193 AAA-type ATPase family protein contains... 62 5e-10
At2g18330.1 68415.m02136 AAA-type ATPase family protein contains... 62 5e-10
At5g16930.1 68418.m01984 AAA-type ATPase family protein contains... 61 9e-10
At3g03060.1 68416.m00302 AAA-type ATPase family protein contains... 60 2e-09
At3g04340.1 68416.m00459 FtsH protease family protein similar to... 52 5e-07
At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding ... 44 1e-04
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ... 41 8e-04
At5g57480.1 68418.m07183 AAA-type ATPase family protein contains... 40 0.001
At4g30250.1 68417.m04301 AAA-type ATPase family protein contains... 40 0.002
At3g50930.1 68416.m05576 AAA-type ATPase family protein contains... 38 0.005
At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding ... 38 0.007
At4g25835.1 68417.m03716 AAA-type ATPase family protein contains... 37 0.012
At5g17730.1 68418.m02079 AAA-type ATPase family protein contains... 37 0.016
At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding ... 36 0.028
At4g24710.1 68417.m03536 AAA-type ATPase family protein similar ... 36 0.028
At5g67630.1 68418.m08527 DNA helicase, putative similar to RuvB-... 36 0.037
At3g28610.1 68416.m03571 AAA-type ATPase family protein contains... 36 0.037
At4g05380.1 68417.m00820 AAA-type ATPase family protein contains... 35 0.050
At3g49830.1 68416.m05448 DNA helicase-related similar to DNA hel... 35 0.050
At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding ... 35 0.050
At3g28510.1 68416.m03561 AAA-type ATPase family protein contains... 35 0.050
At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1 nuc... 35 0.065
At5g22330.1 68418.m02605 TATA box-binding protein-interacting pr... 35 0.065
At3g50940.1 68416.m05577 AAA-type ATPase family protein contains... 35 0.065
At1g43910.1 68414.m05066 AAA-type ATPase family protein contains... 35 0.065
At5g17760.2 68418.m02083 AAA-type ATPase family protein contains... 34 0.087
At5g17760.1 68418.m02082 AAA-type ATPase family protein contains... 34 0.087
At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1, ... 34 0.087
At3g28600.1 68416.m03570 AAA-type ATPase family protein contains... 34 0.087
At3g44330.1 68416.m04763 expressed protein 34 0.11
At3g28570.1 68416.m03567 AAA-type ATPase family protein contains... 34 0.11
At2g18193.1 68415.m02117 AAA-type ATPase family protein contains... 34 0.11
At2g18190.1 68415.m02116 AAA-type ATPase family protein contains... 34 0.11
At1g21690.2 68414.m02715 replication factor C 37 kDa, putative S... 33 0.15
At1g21690.1 68414.m02714 replication factor C 37 kDa, putative S... 33 0.15
At3g28580.1 68416.m03568 AAA-type ATPase family protein contains... 33 0.20
At3g28520.1 68416.m03562 AAA-type ATPase family protein contains... 33 0.20
At5g40010.1 68418.m04852 AAA-type ATPase family protein contains... 32 0.35
At3g28540.1 68416.m03564 AAA-type ATPase family protein contains... 32 0.35
At3g20410.1 68416.m02585 calmodulin-domain protein kinase isofor... 32 0.35
At1g24290.1 68414.m03065 AAA-type ATPase family protein similar ... 32 0.35
At4g21880.1 68417.m03164 pentatricopeptide (PPR) repeat-containi... 32 0.46
At1g77470.1 68414.m09021 replication factor C 36 kDA, putative s... 32 0.46
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 32 0.46
At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR... 31 0.61
At3g05780.1 68416.m00649 Lon protease, putative similar to Lon p... 31 0.61
At3g24530.1 68416.m03080 AAA-type ATPase family protein / ankyri... 31 0.81
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR... 27 0.98
At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial a... 31 1.1
At5g17750.1 68418.m02081 AAA-type ATPase family protein contains... 31 1.1
At3g49210.1 68416.m05378 expressed protein 31 1.1
At2g39730.3 68415.m04879 ribulose bisphosphate carboxylase/oxyge... 31 1.1
At2g39730.2 68415.m04878 ribulose bisphosphate carboxylase/oxyge... 31 1.1
At2g39730.1 68415.m04877 ribulose bisphosphate carboxylase/oxyge... 31 1.1
At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR... 30 1.4
At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-lik... 30 1.9
At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-lik... 30 1.9
At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-lik... 30 1.9
At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR... 29 2.5
At1g73170.1 68414.m08466 expressed protein 29 2.5
At1g04730.1 68414.m00469 AAA-type ATPase family protein contains... 29 2.5
At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR... 29 3.3
At5g51070.1 68418.m06330 ATP-dependent Clp protease ATP-binding ... 29 3.3
At5g40910.1 68418.m04967 disease resistance protein (TIR-NBS-LRR... 29 3.3
At5g22010.1 68418.m02561 AAA-type ATPase family protein / BRCT d... 29 3.3
At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR... 29 3.3
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 29 3.3
At2g41860.2 68415.m05174 calcium-dependent protein kinase, putat... 29 3.3
At2g41860.1 68415.m05173 calcium-dependent protein kinase, putat... 29 3.3
At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR... 29 3.3
At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR... 29 4.3
At3g61710.2 68416.m06916 autophagy protein Apg6 family contains ... 29 4.3
At3g61710.1 68416.m06915 autophagy protein Apg6 family contains ... 29 4.3
At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR... 29 4.3
At2g34440.1 68415.m04225 MADS-box family protein similar to SP|Q... 29 4.3
At1g50700.1 68414.m05701 calcium-dependent protein kinase, putat... 29 4.3
At1g06720.1 68414.m00714 expressed protein contains Pfam domain,... 29 4.3
At5g41750.2 68418.m05081 disease resistance protein (TIR-NBS-LRR... 28 5.7
At5g41750.1 68418.m05080 disease resistance protein (TIR-NBS-LRR... 28 5.7
At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR... 28 5.7
At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR... 28 5.7
At2g46620.1 68415.m05815 AAA-type ATPase family protein contains... 28 5.7
At2g02250.1 68415.m00163 F-box family protein / SKP1 interacting... 28 5.7
At1g63160.1 68414.m07138 replication factor C 40 kDa, putative s... 28 5.7
At1g05990.1 68414.m00627 calcium-binding protein, putative stron... 28 5.7
At5g13360.1 68418.m01539 auxin-responsive GH3 family protein sim... 28 7.5
At3g05790.1 68416.m00650 Lon protease, putative similar to Lon p... 28 7.5
At1g61950.1 68414.m06988 calcium-dependent protein kinase, putat... 28 7.5
At1g13280.1 68414.m01542 allene oxide cyclase family protein sim... 28 7.5
At5g47010.1 68418.m05794 RNA helicase, putative similar to type ... 27 9.9
At5g18360.1 68418.m02160 disease resistance protein (TIR-NBS-LRR... 27 9.9
At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive eff... 27 9.9
At3g49190.1 68416.m05376 condensation domain-containing protein ... 27 9.9
At3g30842.1 68416.m03968 ABC transporter protein, putative simil... 27 9.9
At1g63740.1 68414.m07213 disease resistance protein (TIR-NBS-LRR... 27 9.9
>At3g53230.1 68416.m05865 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain
Length = 815
Score = 164 bits (398), Expect = 6e-41
Identities = 76/84 (90%), Positives = 83/84 (98%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL+YGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEA+KN+P+
Sbjct: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
Query: 183 IIFIDELDAIAPKREKTHGEVERR 254
IIFIDE+D+IAPKREKTHGEVERR
Sbjct: 304 IIFIDEIDSIAPKREKTHGEVERR 327
Score = 153 bits (370), Expect = 2e-37
Identities = 78/132 (59%), Positives = 90/132 (68%)
Frame = +2
Query: 248 KTFVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEIL 427
+ VSQLLTLMDG+K +HVIVM ATNRPNSIDPALRRFGRFDREIDIG+PD GRLE+L
Sbjct: 326 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 385
Query: 428 RIHTKNMKLGXXXXXXXXXXXXXXXXXXXXXXXXLGGQPCSRFREKMDLIDLEDDQIDAE 607
RIHTKNMKL REKMD+IDL+D++IDAE
Sbjct: 386 RIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEA-ALQCIREKMDVIDLDDEEIDAE 444
Query: 608 VLNSLAVSMDNF 643
+LNS+AVS D+F
Sbjct: 445 ILNSMAVSNDHF 456
Score = 93.9 bits (223), Expect = 1e-19
Identities = 40/80 (50%), Positives = 61/80 (76%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L YGPPG GKTL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A +++P
Sbjct: 517 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPC 576
Query: 183 IIFIDELDAIAPKREKTHGE 242
++F DELD+IA +R + G+
Sbjct: 577 VLFFDELDSIATQRGNSVGD 596
Score = 63.7 bits (148), Expect = 1e-10
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +3
Query: 468 NLEQIAAESHGHVGADLASLCSEGSLAADFVRR-WISLTSRTIRLTQRFSILWLSPWITF 644
+LE+++ ++HG+VGADLA+LC+E +L + I L I S+ + F
Sbjct: 399 DLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEEIDAEILNSMAVSNDH--F 456
Query: 645 RYAMTXSSPSALRETVVEVPNVTWTDI 725
+ A+ S+PSALRETVVEVPNV+W DI
Sbjct: 457 QTALGNSNPSALRETVVEVPNVSWEDI 483
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILR 430
++QLLT MDGM V ++ ATNRP+ IDPAL R GR D+ I I +PD R +I +
Sbjct: 605 LNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFK 662
>At5g03340.1 68418.m00286 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain; supporting cDNA
gi|26449351|dbj|AK117125.1|
Length = 810
Score = 161 bits (391), Expect = 4e-40
Identities = 75/84 (89%), Positives = 83/84 (98%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL+YGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEA+KN+P+
Sbjct: 243 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 302
Query: 183 IIFIDELDAIAPKREKTHGEVERR 254
IIFIDE+D+IAPKREKT+GEVERR
Sbjct: 303 IIFIDEIDSIAPKREKTNGEVERR 326
Score = 153 bits (371), Expect = 1e-37
Identities = 79/132 (59%), Positives = 89/132 (67%)
Frame = +2
Query: 248 KTFVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEIL 427
+ VSQLLTLMDG+K +HVIVM ATNRPNSIDPALRRFGRFDREIDIG+PD GRLE+L
Sbjct: 325 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 384
Query: 428 RIHTKNMKLGXXXXXXXXXXXXXXXXXXXXXXXXLGGQPCSRFREKMDLIDLEDDQIDAE 607
RIHTKNMKL REKMD+IDLEDD IDAE
Sbjct: 385 RIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEA-ALQCIREKMDVIDLEDDSIDAE 443
Query: 608 VLNSLAVSMDNF 643
+LNS+AVS ++F
Sbjct: 444 ILNSMAVSNEHF 455
Score = 93.9 bits (223), Expect = 1e-19
Identities = 39/80 (48%), Positives = 61/80 (76%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L YGPPG GKTL+A+A+ANE A F + GPE+++ GESE+N+R+ F++A +++P
Sbjct: 516 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPC 575
Query: 183 IIFIDELDAIAPKREKTHGE 242
++F DELD+IA +R + G+
Sbjct: 576 VLFFDELDSIATQRGNSAGD 595
Score = 63.7 bits (148), Expect = 1e-10
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +3
Query: 468 NLEQIAAESHGHVGADLASLCSEGSLAADFVRR-WISLTSRTIRLTQRFSILWLSPWITF 644
+LE+I+ ++HG+VGADLA+LC+E +L + I L +I S+ + F
Sbjct: 398 DLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVSNEH--F 455
Query: 645 RYAMTXSSPSALRETVVEVPNVTWTDI 725
A+ S+PSALRETVVEVPNV+W DI
Sbjct: 456 HTALGNSNPSALRETVVEVPNVSWEDI 482
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/58 (50%), Positives = 37/58 (63%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILR 430
++QLLT MDGM V ++ ATNRP+ ID AL R GR D+ I I +PD RL I +
Sbjct: 604 LNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFK 661
>At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)
(CDC48) identical to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}
Length = 809
Score = 161 bits (391), Expect = 4e-40
Identities = 75/84 (89%), Positives = 83/84 (98%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL+YGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEA+KN+P+
Sbjct: 243 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 302
Query: 183 IIFIDELDAIAPKREKTHGEVERR 254
IIFIDE+D+IAPKREKT+GEVERR
Sbjct: 303 IIFIDEIDSIAPKREKTNGEVERR 326
Score = 152 bits (368), Expect = 3e-37
Identities = 78/132 (59%), Positives = 89/132 (67%)
Frame = +2
Query: 248 KTFVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEIL 427
+ VSQLLTLMDG+K +HVIVM ATNRPNSIDPALRRFGRFDREIDIG+PD GRLE+L
Sbjct: 325 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 384
Query: 428 RIHTKNMKLGXXXXXXXXXXXXXXXXXXXXXXXXLGGQPCSRFREKMDLIDLEDDQIDAE 607
RIHTKNMKL REKMD+IDLEDD IDAE
Sbjct: 385 RIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEA-ALQCIREKMDVIDLEDDSIDAE 443
Query: 608 VLNSLAVSMDNF 643
+LNS+AV+ ++F
Sbjct: 444 ILNSMAVTNEHF 455
Score = 91.9 bits (218), Expect = 4e-19
Identities = 38/74 (51%), Positives = 58/74 (78%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L YGPPG GKTL+A+A+ANE A F + GPE+++ GESE+N+R+ F++A +++P
Sbjct: 516 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPC 575
Query: 183 IIFIDELDAIAPKR 224
++F DELD+IA +R
Sbjct: 576 VLFFDELDSIATQR 589
Score = 64.5 bits (150), Expect = 7e-11
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +3
Query: 468 NLEQIAAESHGHVGADLASLCSEGSLAADFVRR-WISLTSRTIRLTQRFSILWLSPWITF 644
+LE+I+ ++HG+VGADLA+LC+E +L + I L +I S+ + F
Sbjct: 398 DLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEH--F 455
Query: 645 RYAMTXSSPSALRETVVEVPNVTWTDI 725
A+ S+PSALRETVVEVPNV+W DI
Sbjct: 456 HTALGNSNPSALRETVVEVPNVSWNDI 482
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/58 (50%), Positives = 37/58 (63%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILR 430
++QLLT MDGM V ++ ATNRP+ ID AL R GR D+ I I +PD RL I +
Sbjct: 605 LNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFK 662
>At3g56690.1 68416.m06306 calmodulin-binding protein identical to
calmodulin-binding protein GI:6760428 from [Arabidopsis
thaliana]
Length = 1022
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/84 (51%), Positives = 60/84 (71%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L++GPPGTGKT +AR A +G FF +NGPEI+S+ GESE L + F A +PA
Sbjct: 420 GVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPA 479
Query: 183 IIFIDELDAIAPKREKTHGEVERR 254
++FID+LDAIAP R++ E+ +R
Sbjct: 480 VVFIDDLDAIAPARKEGGEELSQR 503
Score = 87.8 bits (208), Expect = 7e-18
Identities = 42/81 (51%), Positives = 55/81 (67%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GILM+GPPG KTL+ARAVA+E F + GPE+ SK GESE +R F +A N+P+
Sbjct: 760 GILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 819
Query: 183 IIFIDELDAIAPKREKTHGEV 245
IIF DE+D++A R K + V
Sbjct: 820 IIFFDEIDSLASIRGKENDGV 840
Score = 80.2 bits (189), Expect = 1e-15
Identities = 37/65 (56%), Positives = 51/65 (78%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
V+ LL LMDG+ ++ V+V+AATNRP+SI+PALRR GR DREI+IG+P +T R +IL I
Sbjct: 505 VATLLNLMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHII 564
Query: 437 TKNMK 451
+ M+
Sbjct: 565 LRGMR 569
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/64 (50%), Positives = 44/64 (68%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
+SQLL +DG+ + V V+AATNRP+ ID AL R GRFDR + +G P+ T R IL+IH
Sbjct: 847 MSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIH 906
Query: 437 TKNM 448
+ +
Sbjct: 907 LRKI 910
Score = 35.5 bits (78), Expect = 0.037
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 642 FRYAMTXSSPSALRETVVEVPNVTWTDI 725
F A T PSA+RE ++EVP V W D+
Sbjct: 699 FENAKTKIRPSAMREVILEVPKVNWEDV 726
Score = 34.7 bits (76), Expect = 0.065
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +3
Query: 471 LEQIAAESHGHVGADLASLCSEGSLAADFVRRWISLTSRTIRL 599
+EQ+A +HG VGADL++LC E + +RR + +S + L
Sbjct: 577 VEQLAMATHGFVGADLSALCCEAAFVC--LRRHLDQSSSSSNL 617
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/27 (37%), Positives = 21/27 (77%)
Frame = +3
Query: 471 LEQIAAESHGHVGADLASLCSEGSLAA 551
L+++A+ + G+ GAD++ +C E ++AA
Sbjct: 918 LKELASITKGYTGADISLICREAAIAA 944
>At3g01610.1 68416.m00092 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 820
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/84 (50%), Positives = 61/84 (72%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL +GPPG GKT +A A+ANE G F+ I+ E++S ++G SE N+R+ F +A + +P+
Sbjct: 269 GILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPS 328
Query: 183 IIFIDELDAIAPKREKTHGEVERR 254
I+FIDE+DAI KRE E+E+R
Sbjct: 329 IVFIDEIDAIGSKRENQQREMEKR 352
Score = 87.8 bits (208), Expect = 7e-18
Identities = 42/89 (47%), Positives = 55/89 (61%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G L+YGPPG GKTLIA+A ANE GA F I G E+++K GESE +R F+ A +P
Sbjct: 564 GFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPC 623
Query: 183 IIFIDELDAIAPKREKTHGEVERRSFHSY 269
+IF DE+DA+ R K V R + +
Sbjct: 624 VIFFDEVDALTTSRGKEGAWVVERLLNQF 652
Score = 62.9 bits (146), Expect = 2e-10
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 11/89 (12%)
Frame = +2
Query: 221 ERENP-R*SGKTFVSQLLTLMDGM----------KKSSHVIVMAATNRPNSIDPALRRFG 367
+REN R K V+QLLT MDG + V+V+ ATNRP+++DPALRR G
Sbjct: 341 KRENQQREMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSG 400
Query: 368 RFDREIDIGIPDATGRLEILRIHTKNMKL 454
RF+ EI + PD R EIL + + ++L
Sbjct: 401 RFETEIALTAPDEDARAEILSVVAQKLRL 429
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILR 430
++Q L +DG ++ + V V+ ATNRP+ +DPA R GRF + + +P+A R IL+
Sbjct: 649 LNQFLVELDGGERRN-VYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILK 705
>At1g03000.1 68414.m00271 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 941
Score = 92.3 bits (219), Expect = 3e-19
Identities = 40/74 (54%), Positives = 53/74 (71%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+YGPPGTGKTL+A+AVA E F + GPE+++ GESE N+R FE+A P
Sbjct: 693 GVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPC 752
Query: 183 IIFIDELDAIAPKR 224
+IF DELD++AP R
Sbjct: 753 VIFFDELDSLAPAR 766
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSH-VIVMAATNRPNSIDPALRRFGRFDREIDIGI-PDATGRLEILR 430
VSQ+L +DG+ SS + ++ A+NRP+ IDPAL R GRFD+ + +G+ DA+ R +L+
Sbjct: 780 VSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLK 839
Query: 431 IHTKNMKL 454
T+ KL
Sbjct: 840 ALTRKFKL 847
>At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2a)
almost identical to 26S proteasome AAA-ATPase subunit
RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila
melanogaster 26S proteasome subunit 4 ATPase,
PID:g1066065
Length = 443
Score = 88.6 bits (210), Expect = 4e-18
Identities = 40/83 (48%), Positives = 55/83 (66%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+++YG PGTGKTL+A+AVAN T A F + G E++ K G+ +R+ F AD SP+
Sbjct: 224 GVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPS 283
Query: 183 IIFIDELDAIAPKREKTHGEVER 251
I+FIDE+DA+ KR H ER
Sbjct: 284 IVFIDEIDAVGTKRYDAHSGGER 306
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/64 (46%), Positives = 38/64 (59%)
Frame = +2
Query: 263 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 442
+LL +DG V V+ ATNR S+DPAL R GR DR+I+ +PD R I +IHT
Sbjct: 314 ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTS 373
Query: 443 NMKL 454
M L
Sbjct: 374 KMTL 377
>At3g02450.1 68416.m00232 cell division protein ftsH, putative
similar to SWISS-PROT:P46469 cell division protein ftsH
homolog [Lactococcus lactis]; contains Pfam domain,
PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with
diverse cellular 'A'ctivities)
Length = 622
Score = 88.2 bits (209), Expect = 5e-18
Identities = 40/80 (50%), Positives = 53/80 (66%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+ GPPGTGKTL+ARAVA E G FF ++ E + G + +R F A KNSP+
Sbjct: 369 GVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPS 428
Query: 183 IIFIDELDAIAPKREKTHGE 242
IIFIDELDA+ KR ++ +
Sbjct: 429 IIFIDELDAVGGKRGRSFND 448
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
++QLLT MDG + + VIV+AATNRP ++D AL R GRF R++ + PD GR +IL IH
Sbjct: 454 LNQLLTEMDGFESDTKVIVIAATNRPEALDSALCRPGRFSRKVLVAEPDQEGRRKILAIH 513
Query: 437 TKNMKL 454
+++ L
Sbjct: 514 LRDVPL 519
>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
identical to 26S proteasome AAA-ATPase subunit RPT3
GI:6652882 from [Arabidopsis thaliana]
Length = 408
Score = 87.8 bits (208), Expect = 7e-18
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+YGPPGTGKT++A+AVAN T A F + G E + K GE +R F A +N+PA
Sbjct: 191 GVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPA 250
Query: 183 IIFIDELDAIAPKR 224
IIFIDE+DAIA R
Sbjct: 251 IIFIDEVDAIATAR 264
Score = 54.8 bits (126), Expect = 6e-08
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = +2
Query: 263 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 442
+LL MDG ++ +V V+ ATNR +++DPAL R GR DR+I+ +PD + + ++ T
Sbjct: 281 ELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTS 340
Query: 443 NMKL 454
M L
Sbjct: 341 KMNL 344
>At2g20140.1 68415.m02353 26S protease regulatory complex subunit 4,
putative similar to Swiss-Prot:P48601 26S protease
regulatory subunit 4 (P26S4) [Drosophila melanogaster]
Length = 443
Score = 85.8 bits (203), Expect = 3e-17
Identities = 39/83 (46%), Positives = 55/83 (66%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+++YG PGTGKTL+A+AVAN T A F + G E++ K G+ +R+ F AD SP+
Sbjct: 224 GVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPS 283
Query: 183 IIFIDELDAIAPKREKTHGEVER 251
I+FIDE+DA+ KR + ER
Sbjct: 284 IVFIDEIDAVGTKRYDANSGGER 306
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/64 (46%), Positives = 38/64 (59%)
Frame = +2
Query: 263 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 442
+LL +DG V V+ ATNR S+DPAL R GR DR+I+ +PD R I +IHT
Sbjct: 314 ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTS 373
Query: 443 NMKL 454
M L
Sbjct: 374 KMTL 377
>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 726
Score = 85.0 bits (201), Expect = 5e-17
Identities = 42/82 (51%), Positives = 57/82 (69%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL++GPPGTGKT++A+A+ANE GA F ++ I SK GE E N+R F A K SP
Sbjct: 450 GILLFGPPGTGKTMMAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPT 509
Query: 183 IIFIDELDAIAPKREKTHGEVE 248
IIF+DE+D++ +R + GE E
Sbjct: 510 IIFVDEVDSMLGQRTRV-GEHE 530
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Frame = +2
Query: 260 SQLLTLMDGMKKSS--HVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILR 430
++ +T DG+ ++ ++V+AATNRP +D A+ R RF+R I +G+P R +ILR
Sbjct: 537 NEFMTHWDGLMSNAGDRILVLAATNRPFDLDEAIIR--RFERRIMVGLPSVESREKILR 593
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/74 (51%), Positives = 52/74 (70%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+YGPPGTGKTL+ARA A +T A F + GP+++ G+ +R AF+ A + +P
Sbjct: 207 GVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPC 266
Query: 183 IIFIDELDAIAPKR 224
IIFIDE+DAI KR
Sbjct: 267 IIFIDEIDAIGTKR 280
Score = 58.8 bits (136), Expect = 4e-09
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = +2
Query: 263 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 442
+LL +DG + V+AATNR + +DPAL R GR DR+I+ P R IL+IH++
Sbjct: 297 ELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSR 356
Query: 443 NMKL 454
M +
Sbjct: 357 KMNV 360
>At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc
dependent protease VAR2 GI:7650138 from [Arabidopsis
thaliana]
Length = 695
Score = 84.2 bits (199), Expect = 8e-17
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+ GPPGTGKTL+A+A+A E G FF I+G E + G S +R F++A +N+P
Sbjct: 262 GVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC 321
Query: 183 IIFIDELDAIAPKR 224
I+F+DE+DA+ +R
Sbjct: 322 IVFVDEIDAVGRQR 335
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/65 (50%), Positives = 48/65 (73%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
++QLLT MDG + ++ VIV+AATNR + +D AL R GRFDR++ + +PD GR +IL++H
Sbjct: 350 LNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVH 409
Query: 437 TKNMK 451
N K
Sbjct: 410 AGNKK 414
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 84.2 bits (199), Expect = 8e-17
Identities = 39/74 (52%), Positives = 51/74 (68%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+YGPPGTGKTL+ARA A +T A F + GP+++ G+ +R AF A + SP
Sbjct: 206 GVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPC 265
Query: 183 IIFIDELDAIAPKR 224
IIFIDE+DAI KR
Sbjct: 266 IIFIDEIDAIGTKR 279
Score = 57.6 bits (133), Expect = 8e-09
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = +2
Query: 263 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 442
+LL +DG + V+AATNR + +DPAL R GR DR+I+ P R IL+IH++
Sbjct: 296 ELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSR 355
Query: 443 NMKL 454
M +
Sbjct: 356 KMNV 359
>At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc
dependent protease GI:7650138 from [Arabidopsis
thaliana]
Length = 685
Score = 84.2 bits (199), Expect = 8e-17
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+ GPPGTGKTL+A+A+A E G FF I+G E + G S +R F++A +N+P
Sbjct: 255 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC 314
Query: 183 IIFIDELDAIAPKR 224
I+F+DE+DA+ +R
Sbjct: 315 IVFVDEIDAVGRQR 328
Score = 74.1 bits (174), Expect = 9e-14
Identities = 33/65 (50%), Positives = 49/65 (75%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
++QLLT MDG + ++ VIV+AATNR + +D AL R GRFDR++ + +PD GR +IL++H
Sbjct: 343 LNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVH 402
Query: 437 TKNMK 451
+ N K
Sbjct: 403 SGNKK 407
>At1g64110.2 68414.m07264 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 829
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/82 (50%), Positives = 56/82 (68%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL++GPPGTGKT++A+A+A E GA F ++ I SK GE E N+R F A K SP
Sbjct: 557 GILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPT 616
Query: 183 IIFIDELDAIAPKREKTHGEVE 248
IIF+DE+D++ +R + GE E
Sbjct: 617 IIFVDEVDSMLGQRTRV-GEHE 637
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +2
Query: 260 SQLLTLMDGM--KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILR 430
++ ++ DG+ K ++V+AATNRP +D A+ R RF+R I +G+P R +ILR
Sbjct: 644 NEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPAVENREKILR 700
>At1g64110.1 68414.m07263 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 824
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/82 (50%), Positives = 56/82 (68%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL++GPPGTGKT++A+A+A E GA F ++ I SK GE E N+R F A K SP
Sbjct: 552 GILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPT 611
Query: 183 IIFIDELDAIAPKREKTHGEVE 248
IIF+DE+D++ +R + GE E
Sbjct: 612 IIFVDEVDSMLGQRTRV-GEHE 632
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +2
Query: 260 SQLLTLMDGM--KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILR 430
++ ++ DG+ K ++V+AATNRP +D A+ R RF+R I +G+P R +ILR
Sbjct: 639 NEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPAVENREKILR 695
>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
CDC48-related similar to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}; contains Pfam
profiles PF00004: ATPase AAA family, PF00439:
Bromodomain
Length = 1210
Score = 83.4 bits (197), Expect = 1e-16
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVA---NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAD 167
G+L+ GPPGTGKTLIARA+A ++ G F++ G +++SK GE+E L+ FEEA
Sbjct: 417 GVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQ 476
Query: 168 KNSPAIIFIDELDAIAPKREKTHGEV 245
+N P+IIF DE+D +AP R ++
Sbjct: 477 RNQPSIIFFDEIDGLAPVRSSKQEQI 502
Score = 71.3 bits (167), Expect = 6e-13
Identities = 34/67 (50%), Positives = 44/67 (65%)
Frame = +2
Query: 251 TFVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILR 430
+ VS LL LMDG+ V+++ ATNR ++ID ALRR GRFDRE + +P R EIL
Sbjct: 505 SIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFSLPGCEARAEILD 564
Query: 431 IHTKNMK 451
IHT+ K
Sbjct: 565 IHTRKWK 571
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 474 EQIAAESHGHVGADLASLCSEGSLAA 551
E++AA G+ GADL +LC+E ++ A
Sbjct: 580 EELAATCVGYCGADLKALCTEAAIRA 605
>At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit,
putative almost identical to 26S proteasome AAA-ATPase
subunit RPT6a GI:6652888 from [Arabidopsis thaliana];
almost identical to a member of conserved Sug1 CAD
family AtSUG1 GI:13537115 from [Arabidopsis thaliana]
Length = 419
Score = 82.2 bits (194), Expect = 3e-16
Identities = 36/74 (48%), Positives = 53/74 (71%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+YGPPGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A +++P+
Sbjct: 197 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS 256
Query: 183 IIFIDELDAIAPKR 224
IIF+DE+D+I R
Sbjct: 257 IIFMDEIDSIGSAR 270
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/64 (42%), Positives = 42/64 (65%)
Frame = +2
Query: 263 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 442
+LL +DG + S+ + V+ ATNR + +D AL R GR DR+I+ P+ R +IL+IH++
Sbjct: 288 ELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSR 347
Query: 443 NMKL 454
M L
Sbjct: 348 KMNL 351
>At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a)
Length = 419
Score = 82.2 bits (194), Expect = 3e-16
Identities = 36/74 (48%), Positives = 53/74 (71%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+YGPPGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A +++P+
Sbjct: 197 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS 256
Query: 183 IIFIDELDAIAPKR 224
IIF+DE+D+I R
Sbjct: 257 IIFMDEIDSIGSAR 270
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/64 (42%), Positives = 42/64 (65%)
Frame = +2
Query: 263 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 442
+LL +DG + S+ + V+ ATNR + +D AL R GR DR+I+ P+ R +IL+IH++
Sbjct: 288 ELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSR 347
Query: 443 NMKL 454
M L
Sbjct: 348 KMNL 351
>At5g15250.1 68418.m01786 FtsH protease, putative similar to
FtsH-like protein Pftf precursor GI:4325041 from
[Nicotiana tabacum]
Length = 687
Score = 81.8 bits (193), Expect = 4e-16
Identities = 36/74 (48%), Positives = 48/74 (64%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+ GPPGTGKTL+A+A+A E G FF ++G E + G S R F +A NSP
Sbjct: 258 GVLLTGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPC 317
Query: 183 IIFIDELDAIAPKR 224
I+FIDE+DA+ R
Sbjct: 318 IVFIDEIDAVGRMR 331
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/66 (53%), Positives = 51/66 (77%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
++Q+LT MDG ++ VIV+AATNRP +D AL R GRFDR++ +G+PD GR EIL++H
Sbjct: 346 LNQILTEMDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVSVGLPDIRGREEILKVH 405
Query: 437 TKNMKL 454
+++ KL
Sbjct: 406 SRSKKL 411
>At2g45500.1 68415.m05659 AAA-type ATPase family protein similar to
SP|Q9QYY8 Spastin (Fragment) {Mus musculus}; contains
Pfam profiles PF00004: ATPase AAA family, PF04212: MIT
domain
Length = 487
Score = 81.8 bits (193), Expect = 4e-16
Identities = 35/84 (41%), Positives = 56/84 (66%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L++GPPG GKT++A+AVA+E+ A FF ++ + SK GE+E ++ F+ A P+
Sbjct: 251 GLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEAEKLVKTLFQVAISRQPS 310
Query: 183 IIFIDELDAIAPKREKTHGEVERR 254
+IF+DE+D+I R + E RR
Sbjct: 311 VIFMDEIDSIMSTRSTSENEASRR 334
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +3
Query: 468 NLEQIAAESHGHVGADLASLCSEGSL 545
++++I E+ G+ G+DL +LC E ++
Sbjct: 407 DIDKIVKETEGYSGSDLQALCEEAAM 432
>At4g02480.1 68417.m00335 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to Spastin
(Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin (Fragment)
(Swiss-Prot:Q9QYY8) [Mus musculus]; similar to
mitochondrial sorting protein 1 (MSP1) protein
(TAT-binding homolog 4) (Swiss-Prot:P28737)
[Saccharomyces cerevisiae]
Length = 1265
Score = 81.4 bits (192), Expect = 6e-16
Identities = 40/82 (48%), Positives = 56/82 (68%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL++GPPGTGKT++A+AVA E GA F I+ I SK GE E ++ F A K +P+
Sbjct: 1000 GILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPS 1059
Query: 183 IIFIDELDAIAPKREKTHGEVE 248
+IF+DE+D++ +RE GE E
Sbjct: 1060 VIFVDEVDSMLGRRENP-GEHE 1080
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = +2
Query: 224 RENP--R*SGKTFVSQLLTLMDGM--KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDI 391
RENP + + ++ + DG+ K V+V+AATNRP +D A+ R R R + +
Sbjct: 1073 RENPGEHEAMRKMKNEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIR--RLPRRLMV 1130
Query: 392 GIPDATGRLEILRI 433
+PDAT R +IL +
Sbjct: 1131 NLPDATNRSKILSV 1144
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]
Length = 1252
Score = 81.4 bits (192), Expect = 6e-16
Identities = 40/82 (48%), Positives = 56/82 (68%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL++GPPGTGKT++A+AVA E GA F I+ I SK GE E ++ F A K +P+
Sbjct: 987 GILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPS 1046
Query: 183 IIFIDELDAIAPKREKTHGEVE 248
+IF+DE+D++ +RE GE E
Sbjct: 1047 VIFVDEVDSMLGRRENP-GEHE 1067
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Frame = +2
Query: 224 RENP--R*SGKTFVSQLLTLMDGM--KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDI 391
RENP + + ++ + DG+ K V+V+AATNRP +D A+ R R R + +
Sbjct: 1060 RENPGEHEAMRKMKNEFMINWDGLRTKDKERVLVLAATNRPFDLDEAVIR--RLPRRLMV 1117
Query: 392 GIPDATGRLEILRI 433
+PD+ R +IL +
Sbjct: 1118 NLPDSANRSKILSV 1131
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 80.6 bits (190), Expect = 1e-15
Identities = 35/74 (47%), Positives = 50/74 (67%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L++GPPGTGKTL+A+A+A E G FF NG + + G + S ++ F + +P+
Sbjct: 351 GVLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPS 410
Query: 183 IIFIDELDAIAPKR 224
IIFIDE+DAI KR
Sbjct: 411 IIFIDEIDAIGSKR 424
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/62 (53%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = +2
Query: 263 QLLTLMDGMK-KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 439
Q+LT MDG K +S V+V+ ATNR + +DPAL R GRFD+ I +G+P GRL IL++H
Sbjct: 442 QILTEMDGFKVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRLAILKVHA 501
Query: 440 KN 445
+N
Sbjct: 502 RN 503
>At4g27680.1 68417.m03980 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 398
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/93 (40%), Positives = 56/93 (60%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+YGPPGTGKT++A+A+A E+GA F + +MSK G+++ + F A K PA
Sbjct: 121 GVLLYGPPGTGKTMLAKAIAKESGAVFINVRVSNLMSKWFGDAQKLVSAVFSLAYKLQPA 180
Query: 183 IIFIDELDAIAPKREKTHGEVERRSFHSY*RLW 281
IIFIDE+++ +R T E + LW
Sbjct: 181 IIFIDEVESFLGQRRSTDHEAMANMKTEFMALW 213
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +2
Query: 260 SQLLTLMDGMKKSSH--VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRI 433
++ + L DG H V+V+AATNRP+ +D A+ R R + +IGIPD R EIL++
Sbjct: 207 TEFMALWDGFSTDPHARVMVLAATNRPSELDEAILR--RLPQAFEIGIPDRRERAEILKV 264
Query: 434 HTKNMKL 454
K ++
Sbjct: 265 TLKGERV 271
>At4g23940.1 68417.m03443 FtsH protease, putative contains
similarity to zinc dependent protease GI:7650138 from
[Arabidopsis thaliana]
Length = 946
Score = 80.6 bits (190), Expect = 1e-15
Identities = 34/75 (45%), Positives = 51/75 (68%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+ GPPG GKTL+A+A+A E G F+ + G E + L G + +R F+ A N P+
Sbjct: 465 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPS 524
Query: 183 IIFIDELDAIAPKRE 227
+IFIDE+DA+A +R+
Sbjct: 525 VIFIDEIDALATRRQ 539
Score = 68.5 bits (160), Expect = 4e-12
Identities = 33/69 (47%), Positives = 47/69 (68%)
Frame = +2
Query: 248 KTFVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEIL 427
+T ++QLL +DG VI + ATNR + +DPAL R GRFDR+I + P+A GRL+IL
Sbjct: 558 ETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPALLRPGRFDRKIRVRPPNAKGRLDIL 617
Query: 428 RIHTKNMKL 454
+IH +K+
Sbjct: 618 KIHASKVKM 626
>At3g27120.1 68416.m03393 spastin ATPase, putative similar to
SWISS-PROT:Q9QYY8 spastin (Fragment) [Mus musculus];
contains Pfam domain, PF00004: ATPase, AAA family
Length = 287
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/82 (46%), Positives = 54/82 (65%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L++GPPGTGKT+I +A+A E A FF I+ + SK GE E +R F A PA
Sbjct: 45 GLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPA 104
Query: 183 IIFIDELDAIAPKREKTHGEVE 248
+IF+DE+D++ +R K+ GE E
Sbjct: 105 VIFVDEIDSLLSQR-KSDGEHE 125
Score = 35.9 bits (79), Expect = 0.028
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 242 SGKTFVSQLLTLMDGMKKSSH-VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRL 418
S + +Q L M+G S ++++ ATNRP +D A RR R + + I +P + R
Sbjct: 126 SSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARR--RLTKRLYIPLPSSEARA 183
Query: 419 EILR 430
I++
Sbjct: 184 WIIQ 187
>At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit,
putative similar to 26S proteasome AAA-ATPase subunit
RPT1 SP:Q41365 from [Spinacia oleracea]
Length = 464
Score = 80.6 bits (190), Expect = 1e-15
Identities = 37/74 (50%), Positives = 48/74 (64%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L YGPPG+GKTL+ARAVAN TGA F + G E++ K GE +R+ F+ A
Sbjct: 241 GVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKAC 300
Query: 183 IIFIDELDAIAPKR 224
I+F DE+DAI R
Sbjct: 301 ILFFDEIDAIGGAR 314
Score = 64.1 bits (149), Expect = 9e-11
Identities = 27/62 (43%), Positives = 42/62 (67%)
Frame = +2
Query: 263 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 442
++L +DG ++ V+ ATNRP+ +DPAL R GR DR+++ +PD GR +I +IHT+
Sbjct: 331 EILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTR 390
Query: 443 NM 448
M
Sbjct: 391 TM 392
>At2g34560.2 68415.m04246 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 393
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/74 (48%), Positives = 53/74 (71%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL++GPPGTGKT++A+AVA E FF I+ ++SK G+SE +R F+ A ++P+
Sbjct: 147 GILLFGPPGTGKTMLAKAVATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPS 206
Query: 183 IIFIDELDAIAPKR 224
IF+DE+DAI +R
Sbjct: 207 TIFLDEIDAIISQR 220
>At2g34560.1 68415.m04245 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 384
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/74 (48%), Positives = 53/74 (71%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL++GPPGTGKT++A+AVA E FF I+ ++SK G+SE +R F+ A ++P+
Sbjct: 138 GILLFGPPGTGKTMLAKAVATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPS 197
Query: 183 IIFIDELDAIAPKR 224
IF+DE+DAI +R
Sbjct: 198 TIFLDEIDAIISQR 211
>At5g53540.1 68418.m06653 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 403
Score = 79.8 bits (188), Expect = 2e-15
Identities = 38/93 (40%), Positives = 55/93 (59%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+YGPPGTGKT++A+A+A E+ A F + +MSK G+++ + F A K PA
Sbjct: 124 GVLLYGPPGTGKTMLAKAIARESEAVFINVKVSNLMSKWFGDAQKLVSAVFSLAYKLQPA 183
Query: 183 IIFIDELDAIAPKREKTHGEVERRSFHSY*RLW 281
IIFIDE+D+ +R T E + LW
Sbjct: 184 IIFIDEVDSFLGQRRSTDNEAMSNMKTEFMALW 216
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = +2
Query: 260 SQLLTLMDGMK--KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRI 433
++ + L DG +++ V+V+AATNRP+ +D A+ R RF + +IG+PD R +IL++
Sbjct: 210 TEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RFPQSFEIGMPDCQERAQILKV 267
Query: 434 HTK 442
K
Sbjct: 268 VLK 270
>At4g24860.1 68417.m03559 AAA-type ATPase family protein contains Pfam
profile PF00004: ATPase, AAA family
Length = 1122
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/75 (49%), Positives = 52/75 (69%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL++GPPGTGKT++A+AVA E A F I+ I SK GE E ++ F A K SP+
Sbjct: 857 GILLFGPPGTGKTMLAKAVAKEADANFINISMSSITSKWFGEGEKYVKAVFSLASKMSPS 916
Query: 183 IIFIDELDAIAPKRE 227
+IF+DE+D++ +RE
Sbjct: 917 VIFVDEVDSMLGRRE 931
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Frame = +2
Query: 224 RENPR*--SGKTFVSQLLTLMDGM--KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDI 391
RE+PR + + ++ + DG+ ++ V+V+AATNRP +D A+ R R R + +
Sbjct: 930 REHPREHEASRKIKNEFMMHWDGLTTQERERVLVLAATNRPFDLDEAVIR--RLPRRLMV 987
Query: 392 GIPDATGRLEILRI 433
G+PD + R IL++
Sbjct: 988 GLPDTSNRAFILKV 1001
>At3g16290.1 68416.m02056 FtsH protease, putative contains
similarity to cell division protein FtsH GI:1652085 from
[Synechocystis sp. PCC 6803]
Length = 876
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/74 (47%), Positives = 51/74 (68%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL+ GPPG GKTL+A+AVA E G FF I+ + + G S +R ++EA +N+P+
Sbjct: 445 GILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPS 504
Query: 183 IIFIDELDAIAPKR 224
++FIDELDA+ +R
Sbjct: 505 VVFIDELDAVGRER 518
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
++QLL +DG + VI +A+TNRP+ +DPAL R GRFDR+I I P GR+EIL++H
Sbjct: 533 LNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILQVH 592
Query: 437 TK 442
+
Sbjct: 593 AR 594
>At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuolar
sorting protein-related similar to SP|P46467 SKD1
protein (Vacuolar sorting protein 4b) {Mus musculus};
contains Pfam profiles PF00004: ATPase AAA family,
PF04212: MIT domain
Length = 435
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/83 (44%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 LMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAII 188
L+YGPPGTGK+ +A+AVA E + FF ++ +++SK GESE + FE A +++P+II
Sbjct: 169 LLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFEMARESAPSII 228
Query: 189 FIDELDAIAPKR-EKTHGEVERR 254
F+DE+D++ R E E RR
Sbjct: 229 FVDEIDSLCGTRGEGNESEASRR 251
Score = 48.4 bits (110), Expect = 5e-06
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 215 TKERENPR*SGKTFVSQLLTLMDGMKKSSH-VIVMAATNRPNSIDPALRRFGRFDREIDI 391
T+ N + + ++LL M G+ + V+V+AATN P ++D A+RR RFD+ I I
Sbjct: 239 TRGEGNESEASRRIKTELLVQMQGVGHNDEKVLVLAATNTPYALDQAIRR--RFDKRIYI 296
Query: 392 GIPDATGRLEILRIH 436
+P+A R + ++H
Sbjct: 297 PLPEAKARQHMFKVH 311
>At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1
(KTN1) [Arabidopsis thaliana] GI:14133602
Length = 523
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/74 (50%), Positives = 51/74 (68%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+LM+GPPGTGKTL+A+AVA E G FF ++ + SK GESE +R F+ A +P+
Sbjct: 274 GVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPS 333
Query: 183 IIFIDELDAIAPKR 224
IFIDE+D++ R
Sbjct: 334 TIFIDEIDSLCNSR 347
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
VS T DG +K V+V+AATN P ID ALRR R ++ I I +PD R ++ I+
Sbjct: 370 VSNTATNEDGSRKI--VMVLAATNFPWDIDEALRR--RLEKRIYIPLPDFESRKALININ 425
Query: 437 TKNMKL 454
+ +++
Sbjct: 426 LRTVEV 431
>At1g50140.1 68414.m05623 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 640
Score = 79.8 bits (188), Expect = 2e-15
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL++GPPGTGKTL+A+A+A E GA F I G + SK G++E + F A K +P
Sbjct: 388 GILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFATKLAPV 447
Query: 183 IIFIDELDAIAPKR-EKTHGEVERRSFHSY*RLW 281
IIF+DE+D++ R + E RR + + W
Sbjct: 448 IIFVDEIDSLLGARGGSSEHEATRRMRNEFMAAW 481
>At2g29080.1 68415.m03535 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 809
Score = 79.4 bits (187), Expect = 2e-15
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G L+ GPPGTGKTL+A+A A E+G F I+G + M G S +R F+EA + +P+
Sbjct: 357 GALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPS 416
Query: 183 IIFIDELDAIAPKREK--THGEVERRS 257
IIFIDE+DAI R + G ER S
Sbjct: 417 IIFIDEIDAIGRARGRGGLGGNDERES 443
Score = 67.7 bits (158), Expect = 8e-12
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
++QLL MDG ++ V+V+A TNRP+ +D AL R GRFDR+I I PD GR +I +I+
Sbjct: 445 LNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIY 504
Query: 437 TKNMKL 454
K +KL
Sbjct: 505 LKKIKL 510
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 474 EQIAAESHGHVGADLASLCSEGSLAA 551
+++AA + G GAD+A++C+E +L A
Sbjct: 519 QRLAALTPGFAGADIANVCNEAALIA 544
>At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1a)
similar to 26S proteasome ATPase subunit GI:1395190 from
[Spinacia oleracea]
Length = 426
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/74 (50%), Positives = 47/74 (63%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L YGPPGTGKTL+ARAVAN T A F + G E++ K GE +R+ F+ A
Sbjct: 204 GVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKAC 263
Query: 183 IIFIDELDAIAPKR 224
I+F DE+DAI R
Sbjct: 264 IVFFDEVDAIGGAR 277
Score = 66.1 bits (154), Expect = 2e-11
Identities = 26/62 (41%), Positives = 43/62 (69%)
Frame = +2
Query: 263 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 442
+++ +DG ++ V+ ATNRP+++DPAL R GR DR+++ G+PD R +I +IHT+
Sbjct: 294 EIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTR 353
Query: 443 NM 448
M
Sbjct: 354 TM 355
>At3g19740.1 68416.m02499 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 439
Score = 78.6 bits (185), Expect = 4e-15
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL++GPPGTGKTL+A+A+A E GA F I G + SK G++E + F A K +P
Sbjct: 187 GILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPV 246
Query: 183 IIFIDELDAIAPKREKT-HGEVERRSFHSY*RLW 281
IIF+DE+D++ R E RR + + W
Sbjct: 247 IIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAW 280
>At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4a)
gb|AAF22524.1
Length = 399
Score = 78.2 bits (184), Expect = 5e-15
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+YGPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A ++ P
Sbjct: 175 GVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPC 234
Query: 183 IIFIDELDAIAPKR 224
IIF+DE+DAI +R
Sbjct: 235 IIFMDEIDAIGGRR 248
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = +2
Query: 263 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
+LL +DG V ++ ATNRP+ +DPAL R GR DR+I+I +P+ R++IL+IH
Sbjct: 265 ELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIH 322
>At2g26140.1 68415.m03137 FtsH protease, putative contains
similarity to YME1 GI:295582, a member of the
ftsH-SEC18-PAS1-CDC48 family of putative ATPase-encoding
genes from [Saccharomyces cerevisiae]
Length = 717
Score = 78.2 bits (184), Expect = 5e-15
Identities = 37/74 (50%), Positives = 45/74 (60%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+ GPPGTGKT++ARA+A E G FF +G E G +R F A K SP
Sbjct: 262 GVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPC 321
Query: 183 IIFIDELDAIAPKR 224
IIFIDE+DAI R
Sbjct: 322 IIFIDEIDAIGGSR 335
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/63 (49%), Positives = 42/63 (66%)
Frame = +2
Query: 248 KTFVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEIL 427
K ++Q+L +DG K++ +IV+AATN P S+D AL R GRFDR I + PD GR +IL
Sbjct: 344 KMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIL 403
Query: 428 RIH 436
H
Sbjct: 404 ESH 406
>At1g45000.1 68414.m05158 26S proteasome regulatory complex subunit
p42D, putative similar to 26S proteasome regulatory
complex subunit p42D [Drosophila melanogaster]
gi|6434958|gb|AAF08391
Length = 399
Score = 78.2 bits (184), Expect = 5e-15
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+YGPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A ++ P
Sbjct: 175 GVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPC 234
Query: 183 IIFIDELDAIAPKR 224
IIF+DE+DAI +R
Sbjct: 235 IIFMDEIDAIGGRR 248
Score = 61.7 bits (143), Expect = 5e-10
Identities = 28/62 (45%), Positives = 42/62 (67%)
Frame = +2
Query: 263 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 442
+LL +DG + V ++ ATNRP+ +DPAL R GR DR+I+I +P+ R+EIL+IH
Sbjct: 265 ELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAS 324
Query: 443 NM 448
+
Sbjct: 325 GI 326
>At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH
protease GI:13183728 from [Medicago sativa]
Length = 704
Score = 77.8 bits (183), Expect = 7e-15
Identities = 34/67 (50%), Positives = 50/67 (74%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
++QLLT MDG +S VIV+AATNRP+ +D AL R GRFDR++ + PD GR++IL++H
Sbjct: 373 INQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVH 432
Query: 437 TKNMKLG 457
++ +G
Sbjct: 433 SRGKAIG 439
Score = 77.4 bits (182), Expect = 9e-15
Identities = 36/74 (48%), Positives = 46/74 (62%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G L+ GPPGTGKTL+ARAVA E G FF E + G S +R FE+A +P
Sbjct: 285 GCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPC 344
Query: 183 IIFIDELDAIAPKR 224
I+FIDE+DA+ +R
Sbjct: 345 IVFIDEIDAVGRQR 358
>At1g50250.1 68414.m05634 cell division protein ftsH homolog 1,
chloroplast (FTSH1) (FTSH) identical to SP:Q39102 Cell
division protein ftsH homolog 1, chloroplast
precursor (EC 3.4.24.-) [Arabidopsis thaliana]
Length = 716
Score = 77.8 bits (183), Expect = 7e-15
Identities = 35/67 (52%), Positives = 50/67 (74%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
++QLLT MDG +S VIV+AATNRP+ +D AL R GRFDR++ + PD GR++IL++H
Sbjct: 385 INQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVH 444
Query: 437 TKNMKLG 457
++ LG
Sbjct: 445 SRGKALG 451
Score = 77.4 bits (182), Expect = 9e-15
Identities = 36/74 (48%), Positives = 46/74 (62%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G L+ GPPGTGKTL+ARAVA E G FF E + G S +R FE+A +P
Sbjct: 297 GCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPC 356
Query: 183 IIFIDELDAIAPKR 224
I+FIDE+DA+ +R
Sbjct: 357 IVFIDEIDAVGRQR 370
>At5g53170.1 68418.m06610 FtsH protease, putative similar to
ATP-dependent metalloprotease FtsH1 GI:3600100 from [Mus
musculus]
Length = 806
Score = 77.4 bits (182), Expect = 9e-15
Identities = 36/83 (43%), Positives = 49/83 (59%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL+ G PGTGKTL+A+A+A E G FF G E G +R F+ A K +P
Sbjct: 397 GILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPC 456
Query: 183 IIFIDELDAIAPKREKTHGEVER 251
IIFIDE+DA+ R++ G ++
Sbjct: 457 IIFIDEIDAVGSTRKQWEGHTKK 479
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = +2
Query: 248 KTFVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEIL 427
K + QLL MDG +++ +IVMAATN P+ +DPAL R GRFDR I + PD GR EIL
Sbjct: 478 KKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEIL 537
Query: 428 RIH 436
++
Sbjct: 538 ELY 540
>At2g03670.1 68415.m00326 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 603
Score = 77.4 bits (182), Expect = 9e-15
Identities = 36/71 (50%), Positives = 51/71 (71%)
Frame = +2
Query: 245 GKTFVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEI 424
G+ +S LLT MDG++++ ++V+AATNRP +ID AL R GRFD + + PD R EI
Sbjct: 407 GERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEI 466
Query: 425 LRIHTKNMKLG 457
L++HT+NM LG
Sbjct: 467 LQVHTRNMTLG 477
Score = 76.2 bits (179), Expect = 2e-14
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNS-- 176
G+L+YGPPGTGKT + RAV E A +++ + AGESE LR+AF EA ++
Sbjct: 58 GLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVS 117
Query: 177 --PAIIFIDELDAIAPKRE 227
P++IFIDE+D + P+R+
Sbjct: 118 DKPSVIFIDEIDVLCPRRD 136
Score = 74.9 bits (176), Expect = 5e-14
Identities = 36/74 (48%), Positives = 47/74 (63%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL++GPPG KT +A+A AN A FF ++ E+ S GE E+ LR F+ A SP+
Sbjct: 322 GILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPS 381
Query: 183 IIFIDELDAIAPKR 224
IIF DE D +A KR
Sbjct: 382 IIFFDEADVVACKR 395
Score = 69.7 bits (163), Expect = 2e-12
Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Frame = +2
Query: 260 SQLLTLMDGMKKSS---HVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILR 430
SQL TLMD K SS V+V+A+TNR ++IDPALRR GRFD +++ P+ RL+IL+
Sbjct: 147 SQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQ 206
Query: 431 IHTKNMKL 454
++TK + L
Sbjct: 207 LYTKKVNL 214
Score = 41.9 bits (94), Expect = 4e-04
Identities = 28/86 (32%), Positives = 44/86 (51%)
Frame = +3
Query: 468 NLEQIAAESHGHVGADLASLCSEGSLAADFVRRWISLTSRTIRLTQRFSILWLSPWITFR 647
+L+ IA +G+VGADL +LC E +++A +S ++ LT + F+
Sbjct: 219 DLQAIAISCNGYVGADLEALCREATISAS------KRSSDSLILTSQ----------DFK 262
Query: 648 YAMTXSSPSALRETVVEVPNVTWTDI 725
A + PS R VE+P VTW D+
Sbjct: 263 IAKSVVGPSINRGITVEIPKVTWDDV 288
>At1g07510.1 68414.m00804 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 813
Score = 77.0 bits (181), Expect = 1e-14
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G L+ GPPGTGKTL+A+A A E+ F I+G + M G S +R F+EA + +P+
Sbjct: 362 GALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPS 421
Query: 183 IIFIDELDAIAPKREK---THGEVERRS 257
IIFIDE+DAI R + + G ER S
Sbjct: 422 IIFIDEIDAIGRARGRGGFSGGNDERES 449
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
++QLL MDG ++ V+V+A TNRP+ +D AL R GRFDR+I I PD GR +I +I+
Sbjct: 451 LNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIY 510
Query: 437 TKNMKL 454
K +KL
Sbjct: 511 LKKIKL 516
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 474 EQIAAESHGHVGADLASLCSEGSLAA 551
+++AA + G GAD+A++C+E +L A
Sbjct: 525 QRLAALTPGFAGADIANVCNEAALIA 550
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 74.1 bits (174), Expect = 9e-14
Identities = 34/73 (46%), Positives = 45/73 (61%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAI 185
+L+YGPPG GKT I A A F + GPE+++K G SE +R F +A +P I
Sbjct: 881 VLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCI 940
Query: 186 IFIDELDAIAPKR 224
+F DE D+IAPKR
Sbjct: 941 LFFDEFDSIAPKR 953
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/64 (43%), Positives = 41/64 (64%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
V+Q LT +DG++ + V V AAT+RP+ +DPAL R GR DR + P RLEIL +
Sbjct: 965 VNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPERLEILTVL 1024
Query: 437 TKNM 448
++ +
Sbjct: 1025 SRKL 1028
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVA------NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAD 167
IL+YGPPG+GKT++ARA A + A L++ + + L E
Sbjct: 596 ILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGL 655
Query: 168 KNSPAIIFIDELDAIAPKREKTHG 239
+++P++I +D+LD+I T G
Sbjct: 656 EHAPSVIILDDLDSIISSSSDTEG 679
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 468 NLEQIAAESHGHVGADLASLCSEGSLAA 551
+LE IA + G GADL +L S+ LAA
Sbjct: 1035 DLEPIALMTEGFSGADLQALLSDAQLAA 1062
>At5g58870.1 68418.m07376 FtsH protease, putative contains
similarity to cell division protein FtsH homolog 3
SP:P73437 (EC 3.4.24.-) [strain PCC6803] {Synechocystis
sp.}
Length = 806
Score = 73.3 bits (172), Expect = 2e-13
Identities = 35/66 (53%), Positives = 45/66 (68%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
++QLLT MDG SS VIV+ ATNR + +DPALRR GRFDR + + PD GR IL++H
Sbjct: 453 LNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVH 512
Query: 437 TKNMKL 454
+L
Sbjct: 513 VSKKEL 518
Score = 72.1 bits (169), Expect = 4e-13
Identities = 34/75 (45%), Positives = 47/75 (62%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+ G PGTGKTL+A+AVA E+ F + E + G S +R F A K +P+
Sbjct: 364 GVLLVGLPGTGKTLLAKAVAGESDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPS 423
Query: 183 IIFIDELDAIAPKRE 227
IIFIDE+DA+A R+
Sbjct: 424 IIFIDEIDAVAKSRD 438
>At3g47060.1 68416.m05110 FtsH protease, putative contains
similarity to FtsH protease GI:13183728 from [Medicago
sativa]
Length = 802
Score = 73.3 bits (172), Expect = 2e-13
Identities = 35/66 (53%), Positives = 45/66 (68%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
++QLLT MDG +S VIV+ ATNR + +DPALRR GRFDR + + PD GR ILR+H
Sbjct: 449 LNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESILRVH 508
Query: 437 TKNMKL 454
+L
Sbjct: 509 VSKKEL 514
Score = 71.3 bits (167), Expect = 6e-13
Identities = 34/75 (45%), Positives = 46/75 (61%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G+L+ G PGTGKTL+A+AVA E F + E + G S +R F A K +P+
Sbjct: 360 GVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPS 419
Query: 183 IIFIDELDAIAPKRE 227
IIFIDE+DA+A R+
Sbjct: 420 IIFIDEIDAVAKSRD 434
>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
PROSITE domains, PS00674: AAA-protein family signature
and PS00017: ATP/GTP-binding site motif A (P-loop)
Length = 1954
Score = 71.3 bits (167), Expect = 6e-13
Identities = 33/62 (53%), Positives = 43/62 (69%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
VS LL L+DG+K V+V+ ATN P++IDPALRR GRFDREI +P R I+ +H
Sbjct: 845 VSTLLALLDGLKSRGSVVVIGATNYPDAIDPALRRPGRFDREIYFPLPSVDDRAAIISLH 904
Query: 437 TK 442
T+
Sbjct: 905 TR 906
Score = 70.9 bits (166), Expect = 8e-13
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGA-----FFFLINGPEIMSKLAGESESNLRKAFEEAD 167
GIL++G PGTGKTL+ RA+ +F G + + K G++E LR F+ A+
Sbjct: 755 GILLHGHPGTGKTLVVRALIGSLARGNRRIAYFARKGADCLGKYVGDAERQLRLLFQVAE 814
Query: 168 KNSPAIIFIDELDAIAPKR----EKTHGEV 245
K P+IIF DE+D +APKR ++TH V
Sbjct: 815 KCQPSIIFFDEIDGLAPKRSRQQDQTHSSV 844
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 471 LEQIAAESHGHVGADLASLCSEGSLAA 551
L+ IA E+ G GAD+ +LC++ ++ A
Sbjct: 917 LKWIAKETAGFAGADIQALCTQAAMIA 943
>At4g04910.1 68417.m00714 AAA-type ATPase family protein similar to
SP|P18708 Vesicular-fusion protein NSF
(N-ethylmaleimide-sensitive fusion protein)
(NEM-sensitive fusion protein) {Cricetulus griseus};
contains Pfam profiles PF00004: ATPase AAA family,
PF02359: Cell division protein 48 (CDC48) N-terminal
domain; contains non-consensus AT-AC splice sites at
intron 2
Length = 742
Score = 68.5 bits (160), Expect = 4e-12
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANE-TGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSP 179
G+L++GPPGTGKTL+AR + G ++NGPE++SK GE+E N+R F +A+++
Sbjct: 252 GMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQR 311
Query: 180 A--------IIFIDELDAIAPKREKT 233
+I DE+DAI R T
Sbjct: 312 TLGDASELHVIIFDEIDAICKSRGST 337
Score = 68.1 bits (159), Expect = 6e-12
Identities = 30/67 (44%), Positives = 49/67 (73%)
Frame = +2
Query: 251 TFVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILR 430
+ V+QLLT +DG++ ++V+++ TNR + +D AL R GR + +++I +PD GRL+IL+
Sbjct: 346 SIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQ 405
Query: 431 IHTKNMK 451
IHT MK
Sbjct: 406 IHTNKMK 412
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +3
Query: 9 LMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESE-SNLRKAFEEADKNSPAI 185
L+ GP G+GKT +A + ++ + I E M L+ ++ +++ K FE+A K+ +I
Sbjct: 534 LLEGPSGSGKTALAATIGIDSDFPYVKIVSAETMIGLSESTKCAHIVKVFEDAYKSPMSI 593
Query: 186 IFIDELDAI 212
I +D+++ +
Sbjct: 594 IILDDIERL 602
>At1g79560.1 68414.m09275 FtsH protease, putative contains
similarity to chloroplast FtsH protease GI:5804782 from
[Nicotiana tabacum]
Length = 1008
Score = 68.1 bits (159), Expect = 6e-12
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIM-SKLAGESESNLRKAFEEADKNSP 179
G+L+ GPPGTGKTL AR +A E+G F +G E S+ +G ++ N + F A +N+P
Sbjct: 528 GVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAAKIN--EMFSIARRNAP 585
Query: 180 AIIFIDELDAIAPKREK 230
A +F+DE+DAIA + +
Sbjct: 586 AFVFVDEIDAIAGRHAR 602
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +2
Query: 272 TLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMK 451
T +D VI + ATNRP+ +D R GR DR + IG+PDA R++I +H+
Sbjct: 625 TGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVHSAGKN 684
Query: 452 L 454
L
Sbjct: 685 L 685
>At4g04180.1 68417.m00593 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 609
Score = 67.7 bits (158), Expect = 8e-12
Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADK-NSPA 182
+L GPPGTGKT AR +AN+ G + +MSK GESE L F +A++ A
Sbjct: 364 VLFEGPPGTGKTSCARVIANQAGIPLLYVPLEAVMSKYYGESERLLGAVFSQANELPDGA 423
Query: 183 IIFIDELDAIAPKREKTHGEVERR 254
IIF+DE+DA A R+ E RR
Sbjct: 424 IIFLDEIDAFAISRDSEMHEATRR 447
Score = 48.8 bits (111), Expect = 4e-06
Identities = 26/64 (40%), Positives = 37/64 (57%)
Frame = +2
Query: 257 VSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
+S LL +DG ++ V+V+AATNR +DPAL RFD I +PD R EI+ +
Sbjct: 449 LSVLLRQIDGFEQEKKVVVIAATNRKQDLDPAL--ISRFDSMIMFDLPDLQTRQEIIAQY 506
Query: 437 TKNM 448
K +
Sbjct: 507 AKQL 510
>At1g62130.1 68414.m07010 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family
Length = 1025
Score = 64.5 bits (150), Expect = 7e-11
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
GIL++GP GTGKT++A+AVA E GA LIN MS+ E E ++ F A K SP+
Sbjct: 772 GILLFGPSGTGKTMLAKAVATEAGA--NLIN--MSMSRWFSEGEKYVKAVFSLASKISPS 827
Query: 183 IIFIDELDAIAPK-REKTHGE 242
IIF+DE++++ + R KT E
Sbjct: 828 IIFLDEVESMLHRYRLKTKNE 848
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = +2
Query: 281 DGMK--KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRI 433
DG++ + V+V+AATNRP +D A+ R R + +G+PDA R +IL++
Sbjct: 854 DGLRTNEKERVLVLAATNRPFDLDEAVIR--RLPHRLMVGLPDARSRSKILKV 904
>At4g36580.1 68417.m05193 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 620
Score = 61.7 bits (143), Expect = 5e-10
Identities = 29/85 (34%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADK-NSPA 182
++ YGPPGTGKT++AR +A ++G + ++ G ++ + L ++ + + + F+ A K N
Sbjct: 373 MMFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGSQAVTKIHQIFDWAKKSNKGL 431
Query: 183 IIFIDELDAIAPKREKTHGEVERRS 257
++FIDE DA +R T+ +RS
Sbjct: 432 LLFIDEADAFLCERNSTYMSEAQRS 456
>At2g18330.1 68415.m02136 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 636
Score = 61.7 bits (143), Expect = 5e-10
Identities = 29/85 (34%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADK-NSPA 182
++ YGPPGTGKT++AR +A ++G + ++ G ++ + L ++ + + + F+ A K N
Sbjct: 388 MMFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKSNKGL 446
Query: 183 IIFIDELDAIAPKREKTHGEVERRS 257
++FIDE DA +R T+ +RS
Sbjct: 447 LLFIDEADAFLCERNSTYMSEAQRS 471
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +2
Query: 293 KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLG 457
+S ++++ ATNRP +D A+ R D I+ +P R ++L+++ +G
Sbjct: 483 QSRDIVLVLATNRPGDLDSAVT--DRIDEVIEFPLPGEEERFKLLKLYLNKYLMG 535
>At5g16930.1 68418.m01984 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 644
Score = 60.9 bits (141), Expect = 9e-10
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA- 182
IL YGPPGTGKT+ AR +A +G + L+ G ++ + L ++ + + + F+ + K+
Sbjct: 401 ILFYGPPGTGKTMAARELARRSGLDYALMTGGDV-APLGAQAVTKIHQLFDWSKKSKRGL 459
Query: 183 IIFIDELDAIAPKREKTHGEVERRS 257
++FIDE DA +R KT+ +RS
Sbjct: 460 LLFIDEADAFLCERNKTYMSEAQRS 484
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 293 KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
+S +++ ATNRP +D A+ R D ++ +P R ++L ++
Sbjct: 496 QSKDIVLALATNRPGDLDSAVA--DRIDETLEFPLPGEEERFKLLNLY 541
>At3g03060.1 68416.m00302 AAA-type ATPase family protein contains a
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 639
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/85 (35%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA- 182
IL++GPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ K+
Sbjct: 400 ILLHGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGAQAVTKIHELFDWGKKSKRGL 458
Query: 183 IIFIDELDAIAPKREKTHGEVERRS 257
++FIDE DA +R KT+ +RS
Sbjct: 459 LLFIDEADAFLCERNKTYMSEAQRS 483
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 293 KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 436
+S +++ ATNRP +D A+ R D ++ +P R ++L ++
Sbjct: 495 QSKDIVLALATNRPGDLDSAVA--DRVDEVLEFPLPGEEERFKLLNLY 540
>At3g04340.1 68416.m00459 FtsH protease family protein similar to
chloroplast FtsH protease [Arabidopsis thaliana]
GI:1483215; contains Pfam profiles PF01434: Peptidase
family M41, PF00004: ATPase AAA family
Length = 960
Score = 51.6 bits (118), Expect = 5e-07
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKL-AGESESNLRKAFEEADKNSP 179
G+L+ G GTGKT +A A+A E + E+ + L G+S +N+R+ F+ A +P
Sbjct: 459 GVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSAANVRELFQTARDLAP 518
Query: 180 AIIFIDELDAIAPKREK 230
IIF+++ D A R K
Sbjct: 519 VIIFVEDFDLFAGVRGK 535
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +2
Query: 248 KTFVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEIL 427
++F++QLL +DG +K V++MA T ID ALRR GR DR + P R IL
Sbjct: 545 ESFINQLLVELDGFEKQDGVVLMATTRNHKQIDEALRRPGRMDRVFHLQSPTEMERERIL 604
>At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding
subunit ClpX1 (CLPX) identical to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 579
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEADKNSP 179
IL+ GP G+GKTL+A+ +A F + + + + GE ES L K AD N
Sbjct: 226 ILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVA 285
Query: 180 A----IIFIDELDAIAPKRE 227
A I++IDE+D I K E
Sbjct: 286 AAQQGIVYIDEVDKITKKAE 305
>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 656
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK--LAGESESNLRKAFEEADKNSP 179
+L+ GP G+GKTL+A+ +A F + + + + + ES L K A+ N
Sbjct: 311 VLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQ 370
Query: 180 A----IIFIDELDAIAPKRE 227
A I++IDE+D I K E
Sbjct: 371 AAQQGIVYIDEVDKITKKAE 390
>At5g57480.1 68418.m07183 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 520
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G L+YGPPGTGK+ + A+AN G + + E+ S S LRK + +S +
Sbjct: 239 GYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HSNSELRKLLMKT--SSKS 290
Query: 183 IIFIDELDA---IAPKREKTHGEVERRSFH 263
II I+++D + +++ + +RS++
Sbjct: 291 IIVIEDIDCSINLTNRKKNSSNVSSQRSYY 320
>At4g30250.1 68417.m04301 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 512
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/68 (35%), Positives = 39/68 (57%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G L+YGPPGTGK+ + A+AN G + + E+ ++ S LRK + +S +
Sbjct: 240 GYLLYGPPGTGKSSLIAAMANYLGYDIYDLELTEV------QNNSELRKLLMKT--SSKS 291
Query: 183 IIFIDELD 206
II I+++D
Sbjct: 292 IIVIEDID 299
>At3g50930.1 68416.m05576 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 576
Score = 38.3 bits (85), Expect = 0.005
Identities = 27/85 (31%), Positives = 42/85 (49%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G L+YGPPGTGK+ + A+AN F I E+ A + S LR+ S
Sbjct: 301 GYLLYGPPGTGKSSLIAAMANHLN---FDIYDLEL---TAVNNNSELRRLLIATANRS-- 352
Query: 183 IIFIDELDAIAPKREKTHGEVERRS 257
I+ ++++D +++T E R S
Sbjct: 353 ILIVEDIDCSLELKDRTSDEPPRES 377
>At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]; non-consensus splice donor GC at exon 4;
non-consensus splice donor AA at exon 7
Length = 606
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFE----EAD 167
+L+ GP G+GKTL+A+ +A F + + + + GE ES L K + +
Sbjct: 265 VLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQAGYVGEDVESILYKLYVVSGCNVE 324
Query: 168 KNSPAIIFIDELDAIAPKREKTHG 239
+ I++IDE+D + K ++G
Sbjct: 325 EAQRGIVYIDEVDKMTMKSHSSNG 348
>At4g25835.1 68417.m03716 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 506
Score = 37.1 bits (82), Expect = 0.012
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G L+YGPPGTGK+ + A+AN + + E+ +S S LRK + +S +
Sbjct: 239 GYLLYGPPGTGKSSMIAAMANYLRYDIYDLELTEV------KSNSELRKLLMKT--SSKS 290
Query: 183 IIFIDELD 206
II I+++D
Sbjct: 291 IIVIEDID 298
>At5g17730.1 68418.m02079 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 470
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVAN 65
G L+YGPPGTGKT + A+AN
Sbjct: 247 GYLLYGPPGTGKTSLVAAIAN 267
>At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding
subunit / ClpC almost identical to ClpC GI:2921158 from
[Arabidopsis thaliana]; contains Pfam profile PF02861:
Clp amino terminal domain; contains Pfam profile
PF00004: ATPase, AAA family; contains Pfam profile
PF02151: UvrB/uvrC motif
Length = 929
Score = 35.9 bits (79), Expect = 0.028
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANE--TGAFFFLINGPEIMS----------KLAGESESNLRKAF 155
+ G PG GKT IA +A +G I G ++++ K GE E L+K
Sbjct: 300 LIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 359
Query: 156 EEADKNSPAIIFIDELDAI 212
EE ++ I+FIDE+ +
Sbjct: 360 EEIRQSDEIILFIDEVHTL 378
>At4g24710.1 68417.m03536 AAA-type ATPase family protein similar to
HPV16 E1 protein binding protein [Homo sapiens]
gi|2232019|gb|AAB64095; contains Pfam domain, PF00004:
ATPase, AAA family ('A'TPases 'A'ssociated with diverse
cellular 'A'ctivities)
Length = 467
Score = 35.9 bits (79), Expect = 0.028
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 14/88 (15%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETG---------AFFFLINGPEIMSKLAGESESNLRKAFE 158
IL++GPPGTGKT + +A+A + +N + SK ES + K F+
Sbjct: 205 ILLHGPPGTGKTSLCKALAQKLSIRCNSRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 264
Query: 159 E-----ADKNSPAIIFIDELDAIAPKRE 227
+ + + + IDE++++A R+
Sbjct: 265 KIQEMVEEDGNLVFVLIDEVESLAAARK 292
>At5g67630.1 68418.m08527 DNA helicase, putative similar to
RuvB-like DNA helicase reptin [Danio rerio] GI:27733814,
reptin [Drosophila melanogaster] GI:7243682
Length = 469
Score = 35.5 bits (78), Expect = 0.037
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESESNLRKAFEEA 164
IL+ G PGTGKT IA +A G F +I G EI S ++E+ L ++F +A
Sbjct: 69 ILIAGQPGTGKTAIAMGMAKSLGLETPFAMIAGSEIFSLEMSKTEA-LTQSFRKA 122
>At3g28610.1 68416.m03571 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 473
Score = 35.5 bits (78), Expect = 0.037
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G L+YGPPGTGK+ + A+AN + I E+ A ++ S LRK S
Sbjct: 238 GYLLYGPPGTGKSTMIAAMAN---LLNYSIYDLEL---TAIQNNSELRKILTATSNKS-- 289
Query: 183 IIFIDELDA---IAPKREK 230
II I+++D + KR+K
Sbjct: 290 IIVIEDIDCSLDLTGKRKK 308
>At4g05380.1 68417.m00820 AAA-type ATPase family protein contains
similarity to mitochondrial ATPase (AAA family) Bcs1p,
Saccharomyces cerevisiae, Swiss Prot:P32839
Length = 248
Score = 35.1 bits (77), Expect = 0.050
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVAN 65
G L+YGPPGTGK+ + A+AN
Sbjct: 33 GYLLYGPPGTGKSSLVAAIAN 53
>At3g49830.1 68416.m05448 DNA helicase-related similar to DNA
helicase GI:4521249 from [Mus musculus]
Length = 473
Score = 35.1 bits (77), Expect = 0.050
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESESNLRKAFEEA 164
IL+ G PGTGK IA +A G F +I G EI S ++E+ L +AF +A
Sbjct: 69 ILIAGQPGTGKIAIAMGIAKSLGQETPFTMIAGSEIFSLEMSKTEA-LTQAFRKA 122
>At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding
subunit (ClpC) identical to AtClpC GI:5360574 from
[Arabidopsis thaliana]; contains Pfam profiles PF02861:
Clp amino terminal domain and PF02151: UvrB/uvrC motif
Length = 952
Score = 35.1 bits (77), Expect = 0.050
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANE--TGAFFFLINGPEIMS----------KLAGESESNLRKAF 155
+ G PG GKT IA +A +G I G +++ K GE E L+K
Sbjct: 321 LIGEPGVGKTAIAEGLAQRIASGDVPETIEGKTVITLDMGLLVAGTKYRGEFEERLKKLM 380
Query: 156 EEADKNSPAIIFIDELDAI 212
EE ++ I+FIDE+ +
Sbjct: 381 EEIRQSDEIILFIDEVHTL 399
>At3g28510.1 68416.m03561 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 530
Score = 35.1 bits (77), Expect = 0.050
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G L++GPPGTGK+ + A+AN FL + + S L+K D S +
Sbjct: 245 GYLLFGPPGTGKSTMIAAIAN------FLDYDVYDLELTTVKDNSELKKLL--LDTTSKS 296
Query: 183 IIFIDELD 206
II I+++D
Sbjct: 297 IIVIEDID 304
>At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1
nuclear gene encoding mitochondrial protein - Homo
sapiens, EMBL:AF026849 contains Pfam profile: ATPase
family PF00004
Length = 470
Score = 34.7 bits (76), Expect = 0.065
Identities = 25/71 (35%), Positives = 39/71 (54%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G L+YGPPGTGK+ + A+AN + I E+ A ++ S L+K +S +
Sbjct: 243 GYLLYGPPGTGKSTMISAMAN---LLNYNIYDLEL---TAVKNNSELKKLLTAT--SSKS 294
Query: 183 IIFIDELDAIA 215
II I+++D A
Sbjct: 295 IIVIEDIDCSA 305
>At5g22330.1 68418.m02605 TATA box-binding protein-interacting
protein-related similar to TATA box-binding
protein-interacting protein SP:O35753 from [ Mus
musculus]
Length = 458
Score = 34.7 bits (76), Expect = 0.065
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKLAGESE---SNLRKAFEEADK 170
+L+ GPPGTGKT +A ++ E G+ F + G E+ S ++E N R+A K
Sbjct: 69 LLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIK 128
Query: 171 NSPAIIFIDELDAIAPKREKT 233
+ ++ E+ ++P+ ++
Sbjct: 129 ETKE-VYEGEVTELSPEETES 148
>At3g50940.1 68416.m05577 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 34.7 bits (76), Expect = 0.065
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVAN 65
G L+YGPPGTGK+ + A+AN
Sbjct: 249 GYLLYGPPGTGKSSLIAAIAN 269
>At1g43910.1 68414.m05066 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 34.7 bits (76), Expect = 0.065
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVAN 65
G L+YGPPGTGK+ + A+AN
Sbjct: 241 GYLLYGPPGTGKSSMVAAIAN 261
>At5g17760.2 68418.m02083 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 341
Score = 34.3 bits (75), Expect = 0.087
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVAN 65
G L+YGPPGTGK+ + A+AN
Sbjct: 255 GYLLYGPPGTGKSSLVAAMAN 275
>At5g17760.1 68418.m02082 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 505
Score = 34.3 bits (75), Expect = 0.087
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVAN 65
G L+YGPPGTGK+ + A+AN
Sbjct: 255 GYLLYGPPGTGKSSLVAAMAN 275
>At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1,
Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens,
EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849
contains Pfam profile: ATPase family PF00004
gene_id:K17E7.100 contains Pfam profile: ATPase family
PF00004
Length = 533
Score = 34.3 bits (75), Expect = 0.087
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVAN 65
G L+YGPPGTGK+ + A+AN
Sbjct: 247 GYLLYGPPGTGKSSLVAAMAN 267
>At3g28600.1 68416.m03570 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 34.3 bits (75), Expect = 0.087
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G L++GPPGTGK+ + A+AN + I E+ A + S LRK +S +
Sbjct: 238 GYLLHGPPGTGKSTMIAAMANHLN---YSIYDLEL---TAIRNNSELRKLLTAT--SSKS 289
Query: 183 IIFIDELDA---IAPKREK 230
II I+++D + KR+K
Sbjct: 290 IIVIEDIDCSLDLTGKRKK 308
>At3g44330.1 68416.m04763 expressed protein
Length = 565
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 474 EQIAAESHGHVGADLASLCSEGSLAAD--FVRRWISLTSRTIRL 599
E +A +GH G D+ + SLA + +VR W+ L S+T R+
Sbjct: 422 ESLAKHIYGHQGKDIKIFADDSSLAVNPFYVRSWLDLLSQTPRV 465
>At3g28570.1 68416.m03567 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVAN 65
G L+YGPPGTGK+ + A+AN
Sbjct: 238 GYLLYGPPGTGKSTMIAAMAN 258
>At2g18193.1 68415.m02117 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 495
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVAN 65
G L+YGPPGTGK+ + A+AN
Sbjct: 245 GYLLYGPPGTGKSSLIAAMAN 265
>At2g18190.1 68415.m02116 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 494
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVAN 65
G L+YGPPGTGK+ + A+AN
Sbjct: 246 GYLLYGPPGTGKSSLIAAMAN 266
>At1g21690.2 68414.m02715 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa
subunit, RF-C 37 kDa subunit, RFC37) [Homo sapiens];
contains Pfam domain, PF00004: ATPase, AAA family
Length = 327
Score = 33.5 bits (73), Expect = 0.15
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANE 68
+L YGPPGTGKT A A+A++
Sbjct: 33 MLFYGPPGTGKTTTALAIAHQ 53
>At1g21690.1 68414.m02714 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa subunit,
RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
Pfam domain, PF00004: ATPase, AAA family
Length = 339
Score = 33.5 bits (73), Expect = 0.15
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANE 68
+L YGPPGTGKT A A+A++
Sbjct: 45 MLFYGPPGTGKTTTALAIAHQ 65
>At3g28580.1 68416.m03568 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 500
Score = 33.1 bits (72), Expect = 0.20
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 182
G L++GPPGTGK+ + A+AN FL + + ++LR+ E S
Sbjct: 242 GYLLFGPPGTGKSTMIAAMAN------FLEYDVYDLELTTVKDNTHLRRLLIETSAKS-- 293
Query: 183 IIFIDELDA---IAPKREKTHGEVE 248
II I+++D + +R+K E E
Sbjct: 294 IIVIEDIDCSLNLTGQRKKKEEEEE 318
>At3g28520.1 68416.m03562 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 478
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVAN 65
G L++GPPGTGK+ + A+AN
Sbjct: 230 GYLLFGPPGTGKSTMISAIAN 250
>At5g40010.1 68418.m04852 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 514
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVAN 65
G L++GPPGTGK+ + A+AN
Sbjct: 245 GYLLFGPPGTGKSTMIAAMAN 265
>At3g28540.1 68416.m03564 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 510
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 3 GILMYGPPGTGKTLIARAVAN 65
G L++GPPGTGK+ + A+AN
Sbjct: 241 GYLLFGPPGTGKSTMISAMAN 261
>At3g20410.1 68416.m02585 calmodulin-domain protein kinase isoform 9
(CPK9) identical to calmodulin-domain protein kinase
CDPK isoform 9 [Arabidopsis thaliana]
gi|1399265|gb|AAB03242
Length = 541
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 126 ESESNLRKAFEEADKNSPAIIFIDELDA 209
ES NL KAF+ DK+S I IDEL++
Sbjct: 464 ESNENLYKAFQHFDKDSSGYITIDELES 491
>At1g24290.1 68414.m03065 AAA-type ATPase family protein similar to
Werner helicase interacting protein [Homo sapiens]
GI:14349166; contains Pfam profiles PF00004: ATPase
family associated with various cellular activities
(AAA), PF00627: UBA/TS-N domain; contains
ATP/GTP-binding site motif A (P-loop)
Length = 525
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANET 71
I+ +GPPGTGKT IA+++ N +
Sbjct: 140 IVFWGPPGTGKTSIAKSLINSS 161
>At4g21880.1 68417.m03164 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 845
Score = 31.9 bits (69), Expect = 0.46
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 266 LLTLMDGMKKSSHVIVMAATNRPNS-IDPALRRFGRFDREIDIGIPDAT 409
L L DG++ S++I AT PNS ++ A+ +F + E+DI +P +T
Sbjct: 285 LSILQDGVETVSNLIFSYATCIPNSTVEDAIFKFNKLHEELDI-VPSST 332
>At1g77470.1 68414.m09021 replication factor C 36 kDA, putative
similar to SWISS-PROT:P40937 activator 1 36 kDa subunit
(Replication factor C 36 kDa subunit, A1 36 kDa subunit,
RF-C 36 kDa subunit, RFC36) [Homo sapiens]
Length = 369
Score = 31.9 bits (69), Expect = 0.46
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANE 68
+L+YGPPGTGKT AVA +
Sbjct: 75 LLLYGPPGTGKTSTILAVARK 95
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 31.9 bits (69), Expect = 0.46
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETG 74
+L+YGP G+GK+ + R +A+E+G
Sbjct: 356 VLLYGPSGSGKSALIRKLADESG 378
>At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1189
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANETGAFFFL 89
++GPPG GKT IAR V N+ F L
Sbjct: 262 IWGPPGIGKTTIARVVYNQLSHSFQL 287
>At3g05780.1 68416.m00649 Lon protease, putative similar to Lon
protease homolog 2 SP:P93655
Length = 924
Score = 31.5 bits (68), Expect = 0.61
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVAN--ETGAFFFLINGPEIMSKLAGESES-------NLRKAFE 158
I + GPPG GKT I R++A + F F + G ++++ G ++ + + +
Sbjct: 443 ICLSGPPGVGKTSIGRSIARALDRKFFRFSVGGLSDVAEIKGHCQTYVGAMPGKMVQCLK 502
Query: 159 EADKNSPAIIFIDELDAI 212
+P I+F DE+D +
Sbjct: 503 SVGTANPLILF-DEIDKL 519
>At3g24530.1 68416.m03080 AAA-type ATPase family protein / ankyrin
repeat family protein contains Pfam profiles: PF00023
ankyrin repeat, PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 481
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = +3
Query: 18 GPPGTGKTLIARAVANETGAFFFL-------INGPEIMSKLAGESESNLRKAFEEADKNS 176
G PGTGKT++AR + L + +++ + G + R+ +EA+
Sbjct: 252 GNPGTGKTMVARVLGKLLNTVGILPTDKVTEVQRTDLVGEFVGHTGPKTRRKIQEAE--- 308
Query: 177 PAIIFIDELDAIAPKRE 227
I+F+DE + P ++
Sbjct: 309 GGILFVDEAYRLIPMQK 325
>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1234
Score = 27.1 bits (57), Expect(2) = 0.98
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVAN 65
++GP G GKT IARA+ N
Sbjct: 207 IWGPTGIGKTTIARALFN 224
Score = 22.2 bits (45), Expect(2) = 0.98
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 102 EIMSKLAGES--ESNLRKAFEEADKNSPAIIFIDELD 206
+++SKL + E N A +E + +IFID+LD
Sbjct: 265 KLLSKLLDKKNLEINHLDAVKERLRQMKVLIFIDDLD 301
>At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial
almost identical to Lon protease homolog 2
mitochondrial precursor SP:P93655, GI:1848290 from
[Arabidopsis thaliana]
Length = 940
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETGAFFF 86
I + GPPG GKT I R++A FF
Sbjct: 460 ICLSGPPGVGKTSIGRSIARALNRKFF 486
>At5g17750.1 68418.m02081 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 392
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVAN 65
+YGPPGTGK+ + A+AN
Sbjct: 225 LYGPPGTGKSSLVAAMAN 242
>At3g49210.1 68416.m05378 expressed protein
Length = 518
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -3
Query: 447 MFLVCMRRISRRPVASGMPMSISRSNRPKRRSAGSMEFGRFVAAITITW 301
+ L CMR+ S +P S+R R AGS RF+ + + W
Sbjct: 174 LVLACMRKTSNPDELPSLPNQNRSSSRSSRLMAGSRGDSRFLWLVMVIW 222
>At2g39730.3 68415.m04879 ribulose bisphosphate
carboxylase/oxygenase activase / RuBisCO activase
identical to SWISS-PROT:P10896 ribulose bisphosphate
carboxylase/oxygenase activase, chloroplast precursor
(RuBisCO activase, RA)[Arabidopsis thaliana]
Length = 441
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA----DKNSP 179
++G G GK+ V + G +++ E+ S AGE +R+ + EA K
Sbjct: 163 IWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKM 222
Query: 180 AIIFIDELDA 209
+FI++LDA
Sbjct: 223 CCLFINDLDA 232
>At2g39730.2 68415.m04878 ribulose bisphosphate
carboxylase/oxygenase activase / RuBisCO activase
identical to SWISS-PROT:P10896 ribulose bisphosphate
carboxylase/oxygenase activase, chloroplast precursor
(RuBisCO activase, RA)[Arabidopsis thaliana]
Length = 446
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA----DKNSP 179
++G G GK+ V + G +++ E+ S AGE +R+ + EA K
Sbjct: 163 IWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKM 222
Query: 180 AIIFIDELDA 209
+FI++LDA
Sbjct: 223 CCLFINDLDA 232
>At2g39730.1 68415.m04877 ribulose bisphosphate
carboxylase/oxygenase activase / RuBisCO activase
identical to SWISS-PROT:P10896 ribulose bisphosphate
carboxylase/oxygenase activase, chloroplast precursor
(RuBisCO activase, RA)[Arabidopsis thaliana]
Length = 474
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA----DKNSP 179
++G G GK+ V + G +++ E+ S AGE +R+ + EA K
Sbjct: 163 IWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKM 222
Query: 180 AIIFIDELDA 209
+FI++LDA
Sbjct: 223 CCLFINDLDA 232
>At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 896
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANE 68
++GPPG GKT IAR++ N+
Sbjct: 263 IWGPPGVGKTTIARSLYNQ 281
>At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1240
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANETGAFFFL 89
++GPPG GKT IAR + N+ F L
Sbjct: 294 IWGPPGIGKTTIARFLLNQVSDRFQL 319
>At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANETGAFFFL 89
++GPPG GKT IAR + N+ F L
Sbjct: 294 IWGPPGIGKTTIARFLLNQVSDRFQL 319
>At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANETGAFFFL 89
++GPPG GKT IAR + N+ F L
Sbjct: 294 IWGPPGIGKTTIARFLLNQVSDRFQL 319
>At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1194
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANETGAFFFL 89
++GPPG GKT IAR + N+ F L
Sbjct: 298 IWGPPGIGKTTIARFLFNQVSDRFQL 323
>At1g73170.1 68414.m08466 expressed protein
Length = 666
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETG 74
+L+ GPPG GKT + R VA G
Sbjct: 200 LLLIGPPGVGKTTMIREVARMLG 222
>At1g04730.1 68414.m00469 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 954
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESE-SNLRKAFEEADKNSPA 182
+L+ G PG GKT +A A G IN + S A E+ ++ + + P
Sbjct: 348 LLLCGAPGLGKTTLAHIAAKHCGYRVVEINASDERSASAIETRILDVVQMNSVTADSRPK 407
Query: 183 IIFIDELD 206
+ IDE+D
Sbjct: 408 CLVIDEID 415
>At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1046
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANETGAFFFL 89
+YGP G GKT IARA+ + + F L
Sbjct: 215 IYGPAGIGKTTIARALHSRLSSSFQL 240
>At5g51070.1 68418.m06330 ATP-dependent Clp protease ATP-binding
subunit (ClpD), (ERD1) SAG15/ERD1; identical to ERD1
protein GI:497629, SP:P42762 from [Arabidopsis
thaliana]; contains Pfam profile PF02861: Clp amino
terminal domain
Length = 945
Score = 29.1 bits (62), Expect = 3.3
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 13/81 (16%)
Frame = +3
Query: 9 LMYGPPGTGKTLIARAVA---NETGAFFFLINGPEIMS----------KLAGESESNLRK 149
++ G G GKT IA +A E A FL+ IMS K GE E+ +
Sbjct: 313 ILLGEAGVGKTAIAEGLAISIAEASAPGFLLT-KRIMSLDIGLLMAGAKERGELEARVTA 371
Query: 150 AFEEADKNSPAIIFIDELDAI 212
E K+ I+FIDE+ +
Sbjct: 372 LISEVKKSGKVILFIDEVHTL 392
>At5g40910.1 68418.m04967 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Non-consensus TT donor splice site at exon 1
Length = 1104
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANETGAFFFL 89
++GP G GKT IARA+ N+ F L
Sbjct: 211 IWGPAGIGKTTIARALFNQLSTGFRL 236
>At5g22010.1 68418.m02561 AAA-type ATPase family protein / BRCT
domain-containing protein contains Pfam profiles:
PF00533 BRCA1 C Terminus (BRCT) domain, PF00004 ATPase
family associated with various cellular activities (AAA)
Length = 956
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNS 176
+L+ G PG GKT A+ V+ G +N S G++ SN+ K ++ NS
Sbjct: 396 VLLSGTPGIGKTTSAKLVSQMLGFQAVEVNA----SDSRGKANSNIAKGIGGSNANS 448
>At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1193
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 18 GPPGTGKTLIARAVANETGAFFFL 89
GPPG GKT IARA+ ++ F L
Sbjct: 221 GPPGIGKTTIARALRDQISENFQL 244
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 87 LINGPEIMSKLAGESESNLRKAFEEADKNS--PAIIFIDELDAIAPKREKTHGEVERR 254
+I G ++ S + E+E +RK+ E D +S P ++F+ ++ AI K G R
Sbjct: 367 IIGGDDVDSSVLAEAEL-VRKSIEACDSSSDSPCVVFVSKMFAIPMKMIPQDGNHRER 423
>At2g41860.2 68415.m05174 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 7 [Arabidopsis thaliana]
gi|1399277|gb|AAB03247
Length = 530
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 129 SESNLRKAFEEADKNSPAIIFIDEL-DAIAPKREKTHGEV 245
++ +L+KAF DKN I I+EL DA+A + T EV
Sbjct: 428 NDEHLKKAFTFFDKNKSGYIEIEELRDALADDVDTTSEEV 467
>At2g41860.1 68415.m05173 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 7 [Arabidopsis thaliana]
gi|1399277|gb|AAB03247
Length = 425
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 129 SESNLRKAFEEADKNSPAIIFIDEL-DAIAPKREKTHGEV 245
++ +L+KAF DKN I I+EL DA+A + T EV
Sbjct: 323 NDEHLKKAFTFFDKNKSGYIEIEELRDALADDVDTTSEEV 362
>At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1215
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANETGAFFFL 89
++GPPG GKT I R + N+ + F L
Sbjct: 256 IWGPPGIGKTTIVRFLYNQLSSSFEL 281
>At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1038
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANETGAFF 83
++GP G GKT IARA+ N+ F
Sbjct: 210 IWGPAGIGKTTIARALYNQLSTNF 233
>At3g61710.2 68416.m06916 autophagy protein Apg6 family contains
weak similarity to Beclin 1 (Coiled-coil myosin-like
BCL2-interacting protein) (Protein GT197)
(Swiss-Prot:Q14457) [Homo sapiens]; contains Pfam
profile PF04111: Autophagy protein Apg6
Length = 386
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 572 LIDLEDDQIDAEVLNSLAVSMDNFPVRND 658
L +E Q E+LN V +D FP+RND
Sbjct: 288 LAKIEVSQAHLELLNKTNVLIDAFPIRND 316
>At3g61710.1 68416.m06915 autophagy protein Apg6 family contains
weak similarity to Beclin 1 (Coiled-coil myosin-like
BCL2-interacting protein) (Protein GT197)
(Swiss-Prot:Q14457) [Homo sapiens]; contains Pfam
profile PF04111: Autophagy protein Apg6
Length = 517
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 572 LIDLEDDQIDAEVLNSLAVSMDNFPVRND 658
L +E Q E+LN V +D FP+RND
Sbjct: 288 LAKIEVSQAHLELLNKTNVLIDAFPIRND 316
>At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1981
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANETGAFFFL 89
++GPPG GKT IAR + ++ F L
Sbjct: 228 IWGPPGIGKTTIARFLLSQVSKSFQL 253
>At2g34440.1 68415.m04225 MADS-box family protein similar to
SP|Q9XGJ4 MADS box protein GGM13 {Gnetum gnemon};
contains Pfam profile PF00319: SRF-type transcription
factor (DNA-binding and dimerisation domain)
Length = 172
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 87 LINGPEIMSKLAGE-SESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRSFH 263
L+N K GE S+ L A +E K S + +DEL+ + + HG +E + H
Sbjct: 100 LLNQEVEAEKERGEKSQEKLESAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNH 159
>At1g50700.1 68414.m05701 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 9 [Arabidopsis thaliana]
gi|1399265|gb|AAB03242
Length = 521
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 126 ESESNLRKAFEEADKNSPAIIFIDELDA 209
ES N+ KAF+ DK+ I DEL+A
Sbjct: 446 ESNENVYKAFQHFDKDGSGYITTDELEA 473
>At1g06720.1 68414.m00714 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 1147
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAI 185
+++ GPPG GK+L+ +++ E F N PE+ + R F E + A+
Sbjct: 86 VVVQGPPGVGKSLVIKSLVKE----FTKQNVPEVRGPITIVQGKQRRFQFVECPNDINAM 141
Query: 186 I 188
+
Sbjct: 142 V 142
>At5g41750.2 68418.m05081 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1068
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANETGAFF 83
++GP G GKT IAR + N+ + F
Sbjct: 212 IWGPAGIGKTTIARTLFNKISSIF 235
>At5g41750.1 68418.m05080 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1068
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANETGAFF 83
++GP G GKT IAR + N+ + F
Sbjct: 212 IWGPAGIGKTTIARTLFNKISSIF 235
>At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1085
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANETGAFFFL 89
++GP G GK+ IARA+ N+ + F L
Sbjct: 212 IWGPAGIGKSTIARALYNQLSSSFQL 237
>At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1095
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANE 68
++GP G GKT IARA+ N+
Sbjct: 210 IWGPAGVGKTTIARALYNQ 228
>At2g46620.1 68415.m05815 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 491
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 9 LMYGPPGTGKTLIARAVAN 65
L+YGP GTGK+ A+AN
Sbjct: 235 LLYGPSGTGKSSFVAAMAN 253
>At2g02250.1 68415.m00163 F-box family protein / SKP1 interacting
partner 3-related contains similarity to SKP1
interacting partner 3 GI:10716951 from [Arabidopsis
thaliana]
Length = 305
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 618 LWLSPWI-TFRYAMTXSSPSALRETVVEVPNVTWTDIRXG 734
+W++ W+ T +Y S P A E V E+ NV W ++R G
Sbjct: 143 MWIT-WVSTPQYWRWISIPEARFEEVPELLNVCWFEVRGG 181
>At1g63160.1 68414.m07138 replication factor C 40 kDa, putative
similar to SWISS-PROT:Q9WUK4 activator 1 40 kDa subunit
(Replication factor C 40 kDa subunit, A1 40 kDa subunit,
RF-C 40 kDa subunit, RFC40) [Mus musculus]
Length = 333
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVANE 68
+++ GPPGTGKT A+A+E
Sbjct: 51 LILSGPPGTGKTTSILALAHE 71
>At1g05990.1 68414.m00627 calcium-binding protein, putative strong
similarity to calcium-binding protein [Lotus japonicus]
GI:18413495; contains INTERPRO:IPR002048 calcium-binding
EF-hand domain
Length = 150
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 126 ESESNLRKAFEEADKNSPAIIFIDELDAI 212
E E ++++AF D+N I +DEL A+
Sbjct: 75 EEEEDMKEAFNVFDQNGDGFITVDELKAV 103
>At5g13360.1 68418.m01539 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 594
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 232 PTVKWKDVRFTVIDAYGWHEEV-VPRDRDGGHEPAE 336
P K +V +T+I + E + V +D + GH+PAE
Sbjct: 339 PLSKPNEVSYTIIPCMAYFEFLEVEKDYESGHDPAE 374
>At3g05790.1 68416.m00650 Lon protease, putative similar to Lon
protease homolog 2 SP:P93655
Length = 942
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Frame = +3
Query: 6 ILMYGPPGTGKTLIARAVAN--ETGAFFFLINGPEIMSKLAGESES-------NLRKAFE 158
I + GP G GKT I R++A + F F + G ++++ G + + + +
Sbjct: 452 ICLSGPTGVGKTSIGRSIARALDRKFFRFSVGGLSDVAEIKGHRRTYIGAMPGKMVQCLK 511
Query: 159 EADKNSPAIIFIDELDAIAPKREKTHGE 242
+P ++ IDE+D + + HG+
Sbjct: 512 NVGTENP-LVLIDEIDKLGVRGH--HGD 536
>At1g61950.1 68414.m06988 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase GI:3283996 from [Nicotiana tabacum]; contains
protein kinase domain, Pfam:PF00069; contains EF hand
domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 551
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 36 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELD 206
K L+ A + G ++ M++ E E NL KAF+ DK++ I EL+
Sbjct: 442 KQLLEDADVDGNGTIDYIEFISATMNRFRVEREDNLFKAFQHFDKDNSGFISRQELE 498
>At1g13280.1 68414.m01542 allene oxide cyclase family protein
similar to ERD12 [GI:15320414], allene oxide cyclase
GI:8977961 from [Lycopersicon esculentum]; contains Pfam
profile PF06351: Allene oxide cyclase
Length = 254
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 33 GKTLIARAVANETGAFFFLI--NGPEIMSKLAGESESNLRKAFEEADKNSPAII 188
G + AR+ + TG FF I + S+ E N+ + F E D+NSPA++
Sbjct: 48 GLSTRARSTTSSTGGFFRTICSSSSNDYSRPTKIQELNVYE-FNEGDRNSPAVL 100
>At5g47010.1 68418.m05794 RNA helicase, putative similar to type 1
RNA helicase pNORF1 [Homo sapiens] GI:1885356
Length = 1254
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 9 LMYGPPGTGKTLIARAV 59
L+ GPPGTGKT+ + A+
Sbjct: 507 LIQGPPGTGKTVTSAAI 523
>At5g18360.1 68418.m02160 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 900
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAVANETGAFF 83
++GP G GKT IARA+ N F
Sbjct: 212 IWGPAGIGKTTIARALFNRLSENF 235
>At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 818
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = +3
Query: 6 ILMYGPPGTGKT----LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKN 173
+L+ GPPGTGKT I A+ + T A + ++ + +++ + +
Sbjct: 276 VLIQGPPGTGKTQTILSILGAIMHATPA---RVQSKGTDHEVKRGIQMTIQEKYNHWGRA 332
Query: 174 SPAIIFIDELDAIAPK 221
SP I+ ++ DAI P+
Sbjct: 333 SPWILGVNPRDAIMPE 348
>At3g49190.1 68416.m05376 condensation domain-containing protein
contains Pfam profile PF00668: Condensation domain
Length = 522
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = -3
Query: 480 SVLDSTSSPSFMFLVCMRRISRRPVASGMPMSISRSNRPKRRSAGSMEFGRFVAAITITW 301
SV D S S + L CMR+ S +P S+R + GS R + + + W
Sbjct: 150 SVGDGMSIMSLV-LACMRKTSNPDELPSLPYQYRSSSRSSLLTTGSRSDSRLLWLVKVIW 208
>At3g30842.1 68416.m03968 ABC transporter protein, putative similar
to pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1406
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +3
Query: 9 LMYGPPGTGKTLIARAVANET 71
L+ GPPG+GK+ + +A++ +T
Sbjct: 176 LLLGPPGSGKSTLLKALSGKT 196
>At1g63740.1 68414.m07213 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 992
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 12 MYGPPGTGKTLIARAV 59
+YGP G GKT IARA+
Sbjct: 171 IYGPAGIGKTTIARAL 186
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,921,438
Number of Sequences: 28952
Number of extensions: 278487
Number of successful extensions: 1379
Number of sequences better than 10.0: 152
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1353
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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