Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0587
         (927 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23FZ4 Cluster: Putative uncharacterized protein; n=1; ...    40   0.068

>UniRef50_Q23FZ4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1206

 Score = 40.3 bits (90), Expect = 0.068
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
 Frame = -1

Query: 375 SEYYNILKIHDFNPTLSVQTNTIV*LLYT*HHY---DNII*KNFSMMLQLGVDNNYATDA 205
           S+Y+ ++KIHDFN  L +QTN  + L+   H     D  + +    + +L    N A   
Sbjct: 44  SQYFGLVKIHDFNTQLLLQTNCCI-LISPTHAITVKDQFLNEKGEFIYKLD-QINVAFSE 101

Query: 204 HSSRTAIDQYIVSSNFLLFN*DLQLSSDLVFNYL 103
           +  RT I  YI+   F++FN  LQL+   +F Y+
Sbjct: 102 Y--RTQIISYILLDRFIIFN--LQLNLGDIFGYV 131


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 791,829,074
Number of Sequences: 1657284
Number of extensions: 14586909
Number of successful extensions: 24602
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 23913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24593
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85260991088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)