Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0587
         (927 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    24   2.3  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   6.9  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +1

Query: 421 LKGRNP*NFKEIVSGKEVKMNWL*TIKDTNC*NKRTLYLNDLPKRSCLYWRTNSQV 588
           L+G    N++E+   + V  N L T +  N       +LN L K S L    N ++
Sbjct: 388 LRGETQSNYREMEKRQSVPANDLLTTEKDNNEIVTAQFLNQLKKSSVLVHTKNGRL 443


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +1

Query: 868 CCIWAVPSVXAPGWPXAG 921
           CC W   ++  PG   AG
Sbjct: 11  CCCWCCDNLGGPGSSSAG 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,310
Number of Sequences: 438
Number of extensions: 5077
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30234750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)