Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0587
         (927 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g67880.1 68414.m07751 glycosyl transferase family 17 protein ...    29   4.4  
At1g53280.1 68414.m06038 DJ-1 family protein similar to DJ-1 pro...    29   5.8  

>At1g67880.1 68414.m07751 glycosyl transferase family 17 protein low
           similarity to beta-1,4-mannosyl-glycoprotein
           beta-1,4-N-acetylglucosaminyltransferase (EC 2.4.1.144)
           from Mus musculus [SP|Q10470], Rattus norvegicus
           [SP|Q02527], Homo sapiens [SP|Q09327] ; contains Pfam
           profile PF04724 :Glycosyltransferase family 17
          Length = 390

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = +2

Query: 392 KEYFYLFIIILKDEIHRISKKLYQERK*K*IGYEQ*KILIAKTKGHCI*MIYQREAAFIG 571
           K Y Y F   + D+  R S   YQ  K +   Y Q  +++A +  HC    ++R + F+ 
Sbjct: 247 KNYLYSFEFPVDDKSWRASVHRYQTGKTRYAHYRQSDVILADSGWHCS-FCFRRISEFVF 305

Query: 572 GRTPRSH 592
                SH
Sbjct: 306 KMKAYSH 312


>At1g53280.1 68414.m06038 DJ-1 family protein similar to DJ-1
           protein [Homo sapiens] GI:1780755; similar to DJ-1 beta
           (GI:18642508) [Drosophila melanogaster]; contains Pfam
           profile: PF01965 ThiJ/PfpI family; TIGRFAM TIGR01383:
           DJ-1 family protein
          Length = 438

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 750 AEKPQYDAVILPGGLEG 800
           AEK  YD ++LPGGL G
Sbjct: 315 AEKNSYDLIVLPGGLGG 331


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,921,002
Number of Sequences: 28952
Number of extensions: 312743
Number of successful extensions: 508
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2207676696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)