Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0584
(742 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6R0B1 Cluster: Predicted protein; n=9; Ajellomyces cap... 53 6e-06
UniRef50_A6RHH2 Cluster: Predicted protein; n=1; Ajellomyces cap... 52 1e-05
UniRef50_Q9U4W1 Cluster: Pol-like protein; n=1; Aedes aegypti|Re... 52 2e-05
UniRef50_UPI00015B4772 Cluster: PREDICTED: similar to pol-like p... 49 1e-04
UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria gla... 48 2e-04
UniRef50_UPI00015B4820 Cluster: PREDICTED: similar to pol-like p... 45 0.002
UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila melanogast... 45 0.002
UniRef50_A6RCU0 Cluster: Predicted protein; n=8; Ajellomyces cap... 43 0.007
UniRef50_Q1ZBP6 Cluster: Putative uncharacterized protein; n=1; ... 43 0.009
UniRef50_A2QSP9 Cluster: Contig An08c0290, complete genome; n=7;... 43 0.009
UniRef50_UPI00015B5A7A Cluster: PREDICTED: similar to pol-like p... 42 0.012
UniRef50_UPI00015B47A9 Cluster: PREDICTED: similar to pol-like p... 42 0.012
UniRef50_A6RGE6 Cluster: Predicted protein; n=5; Ajellomyces cap... 42 0.012
UniRef50_UPI00015B43F6 Cluster: PREDICTED: similar to pol-like p... 42 0.016
UniRef50_O44317 Cluster: Reverse transcriptase; n=1; Dugesiella ... 42 0.016
UniRef50_Q1E605 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_Q4P8X4 Cluster: Predicted protein; n=1; Ustilago maydis... 42 0.021
UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like p... 41 0.028
UniRef50_A7ERU2 Cluster: Putative uncharacterized protein; n=12;... 39 0.15
UniRef50_UPI00015B518C Cluster: PREDICTED: similar to cuticle pr... 38 0.20
UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster subgro... 38 0.20
UniRef50_O18558 Cluster: Lian-Aa1 retrotransposon protein; n=1; ... 38 0.26
UniRef50_A7EV45 Cluster: Putative uncharacterized protein; n=2; ... 38 0.26
UniRef50_Q5B300 Cluster: Putative uncharacterized protein; n=1; ... 37 0.45
UniRef50_UPI00015B542A Cluster: PREDICTED: similar to myosin-rho... 37 0.60
UniRef50_A7EVG0 Cluster: Reverse transcriptase; n=8; Sclerotinia... 36 0.79
UniRef50_UPI00015B4909 Cluster: PREDICTED: similar to GA16357-PA... 36 1.0
UniRef50_UPI00015B4678 Cluster: PREDICTED: similar to Lian-Aa1 r... 36 1.0
UniRef50_Q7M4J4 Cluster: RNA-directed DNA polymerase (EC 2.7.7.4... 36 1.0
UniRef50_O44315 Cluster: Reverse transcriptase; n=1; Dugesiella ... 36 1.0
UniRef50_A7F6Z7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.0
UniRef50_A7EMT8 Cluster: Putative uncharacterized protein; n=2; ... 36 1.0
UniRef50_A6R8Y2 Cluster: Predicted protein; n=5; Onygenales|Rep:... 36 1.0
UniRef50_UPI00015B4454 Cluster: PREDICTED: similar to Cat Eye Sy... 36 1.4
UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori... 36 1.4
UniRef50_A7ELY2 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_A3LY19 Cluster: Predicted protein; n=3; Saccharomycetal... 35 1.8
UniRef50_A2G4D9 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_A7EXQ0 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_A7EVI9 Cluster: Putative uncharacterized protein; n=2; ... 35 2.4
UniRef50_UPI00015B4A79 Cluster: PREDICTED: similar to Lian-Aa1 r... 34 3.2
UniRef50_A6XPI4 Cluster: Predicted protein; n=3; Ajellomyces cap... 34 3.2
UniRef50_A6RHF5 Cluster: Predicted protein; n=2; Ajellomyces cap... 34 3.2
UniRef50_A6R672 Cluster: Predicted protein; n=42; Ajellomyces ca... 34 3.2
UniRef50_A6QZP1 Cluster: Predicted protein; n=37; Ajellomyces ca... 34 3.2
UniRef50_Q2Z0V7 Cluster: Putative Ribonuclease HI; n=1; Pseudomo... 34 4.2
UniRef50_Q5KPB0 Cluster: Ribonuclease H, putative; n=2; Filobasi... 34 4.2
UniRef50_Q2PIN6 Cluster: Predicted protein; n=1; Aspergillus ory... 34 4.2
UniRef50_A7EW18 Cluster: Predicted protein; n=1; Sclerotinia scl... 34 4.2
UniRef50_A1WJR7 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_Q8AII1 Cluster: Gag-Pol polyprotein (Pr160Gag-Pol) [Con... 33 5.6
UniRef50_P32542 Cluster: Pol polyprotein [Contains: Protease (Re... 33 5.6
UniRef50_Q596Q3 Cluster: Pol protein; n=76; Human immunodeficien... 33 9.7
UniRef50_Q7MAJ4 Cluster: GLYCYL-TRNA SYNTHETASE BETA CHAIN; n=3;... 33 9.7
UniRef50_Q5BGG2 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_Q5B7Y7 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_A3LU04 Cluster: Predicted protein; n=5; Saccharomycetal... 33 9.7
>UniRef50_A6R0B1 Cluster: Predicted protein; n=9; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1672
Score = 53.2 bits (122), Expect = 6e-06
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = -3
Query: 497 WIPSHCGIKGNEIVDRIANEAINCGDIYYFKNYSHDLVSLPKTYLNNAWSAQWYNGVKAK 318
W+P H GIKGNE+ D++A ++IN + F + L + W +W + K
Sbjct: 1480 WVPGHSGIKGNEMADQLAKQSINPNPTHGFPKPASHLREASRNSTTQEWRDEWSSTAKGT 1539
Query: 317 YYRRVQPTIPSK 282
+ R++ +P +
Sbjct: 1540 HLRKIDAALPGR 1551
Score = 34.3 bits (75), Expect = 3.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 237 LIRMRLGHTCSPAHLATIGVLDSSKCECGADIGDLNHIILSCP 109
L ++R GH+ I D +KCECGA ++H+++ CP
Sbjct: 1568 LAQLRTGHSWLNEFRNRIKYADDNKCECGAK-ESVHHVLVDCP 1609
>UniRef50_A6RHH2 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 832
Score = 52.0 bits (119), Expect = 1e-05
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = -3
Query: 497 WIPSHCGIKGNEIVDRIANEAINCGDIYYFKNYSHDLVSLPKTYLNNAWSAQWYNGVKAK 318
W+P H GI+GNE+ D++A ++IN + F + L + + W +W + K
Sbjct: 640 WVPGHSGIRGNEMADQLAKQSINPNPTHGFPKPASHLREASRNSTTHEWRDEWSSTAKGT 699
Query: 317 YYRRVQPTIPSK 282
+ R++ +P +
Sbjct: 700 HLRKIDAALPGQ 711
>UniRef50_Q9U4W1 Cluster: Pol-like protein; n=1; Aedes aegypti|Rep:
Pol-like protein - Aedes aegypti (Yellowfever mosquito)
Length = 1208
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/74 (29%), Positives = 43/74 (58%)
Frame = -3
Query: 521 SKSYISFVWIPSHCGIKGNEIVDRIANEAINCGDIYYFKNYSHDLVSLPKTYLNNAWSAQ 342
S S F+W+P HCGI+GN D +A++ G ++ DL + K+ + ++W+ +
Sbjct: 1036 SPSQTVFLWVPGHCGIRGNVEADHLASKG-RSGRLFTRLTPGMDLKNWTKSQIRSSWALE 1094
Query: 341 WYNGVKAKYYRRVQ 300
W N ++ K+ R+++
Sbjct: 1095 WVN-LRDKFIRKIK 1107
>UniRef50_UPI00015B4772 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 751
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -2
Query: 231 RMRLGHTCSPAHLATIGVLDSSKCECGADIGDLNHIILSCPLFD 100
R R H A L + ++ S+KCECG D DLNHI+ +CP+F+
Sbjct: 661 RCRADHYNLAASLFRVNIVSSAKCECGYDSEDLNHILWNCPIFE 704
Score = 47.2 bits (107), Expect = 4e-04
Identities = 34/94 (36%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = -3
Query: 542 PVNEMYGSKSYISFVWIPSHCGIKGNEIVDRIANEAINCGDIYYFK-NYSHDLVSLPKTY 366
P NE+Y F WIP+H GI+GNE D +A A Y + YS L S KT
Sbjct: 562 PQNELY-------FYWIPAHVGIEGNERADTVAKRATEKNFSNYSRVPYSDILASAKKTA 614
Query: 365 LNNAWSAQWYNG-VKAKYYRRVQPTIPSKPWFYK 267
N S K + Y + T KPWF+K
Sbjct: 615 FVNTDSINKEQAQKKGREYFEMYRTENVKPWFHK 648
>UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria
glabrata|Rep: Pol-like protein - Biomphalaria glabrata
(Bloodfluke planorb)
Length = 1222
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = -3
Query: 581 ISTDLPYSLRL*KPVNEMYGSKSYISFVWIPSHCGIKGNEIVDRIANEAIN---CGDIYY 411
+ TD+P + K ++ + + ++F+W+PSH GI+GNE DR A A+N G
Sbjct: 1030 MKTDIPLVHKSLKLLDLITADRRDVTFIWVPSHVGIEGNEAADREAKRALNHAVSGTQIP 1089
Query: 410 FKNYSHDLVSLPKTYLNNAWSAQWYNGVK 324
+ + + S N W A+ ++ ++
Sbjct: 1090 YSDLRQSIASATYREWQNRWEAETHSKLR 1118
>UniRef50_UPI00015B4820 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to pol-like protein - Nasonia vitripennis
Length = 1050
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -2
Query: 243 SSLIRMRLGHTCSPAHLATIGVLDSSKCECGADIGDLNHIILSCPLFD 100
+++ R+R GH A L+ I V+ KC+CG D NH+ CPL+D
Sbjct: 953 TTINRIRSGHYNLGASLSRINVVPDPKCQCGDPHQDANHVFWQCPLYD 1000
>UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila
melanogaster|Rep: Pol protein - Drosophila melanogaster
(Fruit fly)
Length = 1227
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEAINCGDIYYFKNYSHDLVSLPKTYLNNAWSAQW 339
I+ +W+PSH GI GNE+ D+ A E I + S DL S K YL ++W
Sbjct: 1058 ITLLWVPSHQGIHGNELADKAAQEMRLTPSILFTPFNSKDLKSRIKLYLKEKKLSEW 1114
>UniRef50_A6RCU0 Cluster: Predicted protein; n=8; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1838
Score = 43.2 bits (97), Expect = 0.007
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEAINC 426
+ F WIP+H GI+GNE+ D++A EA C
Sbjct: 1630 VEFYWIPAHQGIEGNELADKLAKEATGC 1657
>UniRef50_Q1ZBP6 Cluster: Putative uncharacterized protein; n=1;
Psychromonas sp. CNPT3|Rep: Putative uncharacterized
protein - Psychromonas sp. CNPT3
Length = 776
Score = 42.7 bits (96), Expect = 0.009
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEAINCGDIY 414
IS +W+PSHCGI GNE D +A + G Y
Sbjct: 731 ISLIWVPSHCGIPGNEKADSLAKTGVKEGAFY 762
>UniRef50_A2QSP9 Cluster: Contig An08c0290, complete genome; n=7;
Trichocomaceae|Rep: Contig An08c0290, complete genome -
Aspergillus niger
Length = 1644
Score = 42.7 bits (96), Expect = 0.009
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEAINCGDIYYFKNYSHDLVSLPKTYLNNA----WSAQ 342
I W+P H I GN+ DR+A EA G + F L+S + Y+ W +
Sbjct: 1447 IRLQWVPGHSEILGNDAADRLAKEAAIPGKTHPFS----PLLSRERAYIRQGILTQWEKE 1502
Query: 341 WYNGVKAKYYRRVQPTIPSK 282
W + R++ T+P+K
Sbjct: 1503 WKESRDGGHLRKIDNTLPAK 1522
>UniRef50_UPI00015B5A7A Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 727
Score = 42.3 bits (95), Expect = 0.012
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Frame = -3
Query: 566 PYSLRL*KPVNEMYGS--KSYISFVWIPSHCGIKGNEIVDRIANEAINCGD-----IYYF 408
P+ L + K NE ++ I + WIP+H GI GNE+ D++A EA D I Y
Sbjct: 455 PHVLEIKKKHNEFISKNPENDIKYYWIPAHVGILGNEMADQLAKEAAELNDESPVTIPYA 514
Query: 407 KNYS-HDLVSLPKTYLNNAWSAQWYNGVKAKYYRRVQPTIPSKPWFYKYN 261
Y H + KT L+ + N K+ + + SKPWF+ N
Sbjct: 515 DFYGLHKMECKFKTNLH--VKTEGLNKGKSFFLKFHHER--SKPWFHNKN 560
>UniRef50_UPI00015B47A9 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 819
Score = 42.3 bits (95), Expect = 0.012
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = -2
Query: 240 SLIRMRLGHTCSPAHLATIGVLDSSKCECGADIGDLNHIILSCPLFD 100
S+ R+R GHT A L ++D+ KCECG ++ + H+ SC ++
Sbjct: 733 SINRIRSGHTSLNASLYKHKIVDTDKCECGDEVESVEHVFWSCKRYN 779
Score = 37.9 bits (84), Expect = 0.26
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEAINCGD 420
+ VWIP+H G+ GNEIVD +A +A G+
Sbjct: 660 VKLVWIPAHIGLTGNEIVDDMAKKAAINGE 689
>UniRef50_A6RGE6 Cluster: Predicted protein; n=5; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1139
Score = 42.3 bits (95), Expect = 0.012
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEAINC 426
+ F WIP+H GI+GNE+ D++A EA C
Sbjct: 928 VEFYWIPAHQGIEGNELADKLAMEATGC 955
>UniRef50_UPI00015B43F6 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to pol-like protein - Nasonia vitripennis
Length = 963
Score = 41.9 bits (94), Expect = 0.016
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEAINCGDIYYFKNYSHDLVSLPKTYLNNAWSAQ 342
I VWIPSH I GNEI DR A A+ K++ + + + NNAW ++
Sbjct: 866 IQLVWIPSHKNISGNEIADREAKGALKLPLQIELKSHWYQIFNSSILESNNAWHSE 921
>UniRef50_O44317 Cluster: Reverse transcriptase; n=1; Dugesiella
sp.|Rep: Reverse transcriptase - Dugesiella sp
Length = 488
Score = 41.9 bits (94), Expect = 0.016
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEAINCGDIYYFKNYSHDLVSLPKTYLNNAWSAQWYNG 330
I W H G GNE+ DR A EA+ G Y + +L K W+ +W
Sbjct: 347 IDLYWTKGHAGQAGNEMADRAAKEAVISGQRYVMPRPVSWVKALIKKETLREWATRWAGS 406
Query: 329 VKAKYYRRVQPTIPSKPWFY 270
K ++ + K W +
Sbjct: 407 DKGRHTHNIISAPGFKEWIF 426
>UniRef50_Q1E605 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 474
Score = 41.9 bits (94), Expect = 0.016
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -3
Query: 530 MYGSKSYISFVWIPSHCGIKGNEIVDRIANEA 435
+ G + IS W+P+H GIKGNE+ DR+A EA
Sbjct: 254 LMGLEIAISLHWVPAHQGIKGNELADRLAKEA 285
>UniRef50_Q4P8X4 Cluster: Predicted protein; n=1; Ustilago
maydis|Rep: Predicted protein - Ustilago maydis (Smut
fungus)
Length = 183
Score = 41.5 bits (93), Expect = 0.021
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = -3
Query: 533 EMYGSKSYISFVWIPSHCGIKGNEIVDRIANEAINCGDIYYFKNYSHDLVSLP-KTYLNN 357
+ + +++ VW+ HCGI GNE D +A A + +++ +V L + +
Sbjct: 61 QQFAVAKHVAVVWVTGHCGILGNERADSLAQNAADDVIRESAEHHEEAVVQLAIRRRVMQ 120
Query: 356 AWSAQWYNGVKAKYYRRVQPTIPSKPWFYKYN 261
AW+ W + K +R + + F YN
Sbjct: 121 AWNQAWNSSPKGSNFRSKLHKLRAGDTFKLYN 152
>UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to pol-like protein - Nasonia vitripennis
Length = 1119
Score = 41.1 bits (92), Expect = 0.028
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEAINCGDIYYFK-NYSHDLVSLPKTYLNNAWSAQWYN 333
I VWIP+H GIKGNE VD++A A G + YS ++ +T
Sbjct: 933 IKLVWIPAHAGIKGNETVDKMAKNAAIDGKLLNDPIRYSDFFANIKETCKKENQDIITNL 992
Query: 332 GVKAK--YYRRVQPTIPSKPWF 273
G K Y+ +KPWF
Sbjct: 993 GKKKGIFYFENFGDIEGNKPWF 1014
Score = 38.7 bits (86), Expect = 0.15
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = -2
Query: 240 SLIRMRLGHTCSPAHLATIGVLDSSKCECGADIGDLNHIILSCPLFD 100
S R+R GH+ + L + D+ KC+CG I + HI +C LF+
Sbjct: 1026 SFNRIRCGHSSLNSSLFKHKITDTDKCKCGEAIDTIEHIFWNCNLFN 1072
>UniRef50_A7ERU2 Cluster: Putative uncharacterized protein; n=12;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1660
Score = 38.7 bits (86), Expect = 0.15
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = -2
Query: 240 SLIRMRLGHTCSPAHLATIGVLDSSKCECGADIGDLNHIILSCPLFDHXXXXXXXXXXSI 61
+L ++++GH ++L G+ + C CG +H++LSCPL+ I
Sbjct: 1547 ALFQLKIGHGYFKSYLKRFGISSNDNCRCGGKESP-DHLLLSCPLY-KMARKTLNKDNPI 1604
Query: 60 PFPISVPYLLHTVDPVI 10
P ++ YLLHT +I
Sbjct: 1605 VRP-TMKYLLHTKAGII 1620
Score = 34.7 bits (76), Expect = 2.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEA 435
IS W+P H ++GNE+ D +A EA
Sbjct: 1455 ISLNWVPGHTSVQGNELADSLAKEA 1479
>UniRef50_UPI00015B518C Cluster: PREDICTED: similar to cuticle
protein LCP65Ac; n=3; Nasonia vitripennis|Rep:
PREDICTED: similar to cuticle protein LCP65Ac - Nasonia
vitripennis
Length = 256
Score = 38.3 bits (85), Expect = 0.20
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEAINCGD 420
I + WIP H GI GNE+ D++A EA D
Sbjct: 61 IKYYWIPVHVGILGNEMADQLAKEAAELND 90
>UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster
subgroup|Rep: Putative ORF2 - Drosophila melanogaster
(Fruit fly)
Length = 1219
Score = 38.3 bits (85), Expect = 0.20
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEA----------INCGDIYYFKNYSHDLVSLPKTYLN 360
I +WIP H GIKGNE+ D+ A A IN DI K+ DL + K ++
Sbjct: 1043 IKIMWIPGHSGIKGNELADQAAKSASSMPLILTPNINTTDIK--KHLKADLATKQKEHII 1100
Query: 359 NAWSAQWYNGV 327
N + WY +
Sbjct: 1101 NC--SPWYQSI 1109
>UniRef50_O18558 Cluster: Lian-Aa1 retrotransposon protein; n=1; Aedes
aegypti|Rep: Lian-Aa1 retrotransposon protein - Aedes
aegypti (Yellowfever mosquito)
Length = 1189
Score = 37.9 bits (84), Expect = 0.26
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -2
Query: 243 SSLIRMRLGHTCSPAHLATIGVLDSSKCE-CGADIGDLNHIILSCPLF 103
S L+R GH H+A I DS C+ C +D G H+I +CP+F
Sbjct: 1105 SLLVRALTGHCRLNYHMANIQRADSFVCDSCDSDYGTSYHLICNCPVF 1152
Score = 34.3 bits (75), Expect = 3.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 533 EMYGSKSYISFVWIPSHCGIKGNEIVDRIANE 438
E S + ++ VW+P H I GNE+ D +A +
Sbjct: 1005 EELNSVNSVNLVWVPGHSSIAGNELADELARD 1036
>UniRef50_A7EV45 Cluster: Putative uncharacterized protein; n=2;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 778
Score = 37.9 bits (84), Expect = 0.26
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = -2
Query: 240 SLIRMRLGHTCSPAHLATIGVLDSSKCECGADIGDLNHIILSCPLF 103
+L ++++GH ++L G+ + C CG +H++LSCPL+
Sbjct: 423 ALFQLKIGHGYFKSYLKRFGISSNDNCRCGGKESP-DHLLLSCPLY 467
Score = 34.7 bits (76), Expect = 2.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEA 435
IS W+P H ++GNE+ D +A EA
Sbjct: 331 ISLNWVPGHTSVQGNELADSLAKEA 355
>UniRef50_Q5B300 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 804
Score = 37.1 bits (82), Expect = 0.45
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEAINCGDIYYFKNYSHDLVSLPKTYLNNAWSAQWYNG 330
+ F WIP+H G++GNE DR A EA I + + S K + +A+W N
Sbjct: 286 VHFRWIPAHRGVEGNEQADRRAKEATGWRRIRGHRG-RMTIRSAVKRRAHEVVNARWEND 344
Query: 329 VKAKYYRR 306
K+ ++ R
Sbjct: 345 WKSCHHGR 352
Score = 34.3 bits (75), Expect = 3.2
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -2
Query: 237 LIRMRLGHTCSPAHLATIGVLD--SSKCECGADIGDLNHIILSCPLF 103
+++MR G +L GV D +S C+CG + HI+L+CP F
Sbjct: 380 IVQMRTGKIGLRHYLYQRGVPDVPNSDCQCGRATQSVRHILLACPTF 426
>UniRef50_UPI00015B542A Cluster: PREDICTED: similar to myosin-rhogap
protein, myr; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to myosin-rhogap protein, myr - Nasonia
vitripennis
Length = 2292
Score = 36.7 bits (81), Expect = 0.60
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIA 444
+ +W+P H GI+GNEI DR+A
Sbjct: 2115 VRLLWVPGHTGIRGNEIADRLA 2136
>UniRef50_A7EVG0 Cluster: Reverse transcriptase; n=8; Sclerotinia
sclerotiorum 1980|Rep: Reverse transcriptase -
Sclerotinia sclerotiorum 1980
Length = 1708
Score = 36.3 bits (80), Expect = 0.79
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEAINCGDIYYFKNYSHDLVSLP-KTYLNNAWSAQWYN 333
IS W+P H ++GNE+ D++A EA S L+ + K Y S QW N
Sbjct: 1528 ISLNWVPDHTSVEGNELADKLAKEATTIQPT--SNETSFGLLGMTVKEYA----SDQWLN 1581
Query: 332 GVKAKYYRRVQ-PTIPSK--PW 276
+K R Q P+ SK PW
Sbjct: 1582 TLKQYELRSNQSPSTYSKLFPW 1603
>UniRef50_UPI00015B4909 Cluster: PREDICTED: similar to GA16357-PA,
partial; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to GA16357-PA, partial - Nasonia vitripennis
Length = 826
Score = 35.9 bits (79), Expect = 1.0
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Frame = -3
Query: 566 PYSLRL*KPVNEMYGS--KSYISFVWIPSHCGIKGNEIVDRIANEAINCGD-----IYYF 408
P+ L + K NE ++ I + WIP+H GI NE+ ++A EA D I Y
Sbjct: 592 PHVLEIKKKHNEFISKNPENDIKYYWIPAHVGILENEMAYQLAKEAAELNDESPVTIPYA 651
Query: 407 KNYS-HDLVSLPKTYLNNAWSAQWYNGVKAKYYRRVQPTIPSKPWFY 270
Y H + KT L+ + N K K + R SKPWF+
Sbjct: 652 NFYGLHKMECKFKTNLH--VKTEGLN--KGKSFFRNFHHERSKPWFH 694
Score = 32.7 bits (71), Expect = 9.7
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 231 RMRLGHTCSPAHLATIGVLDSSKCECGADIGDLNHIILSCPLFD 100
R R H L IG +SKC CG + +LNH+ C L++
Sbjct: 708 RCRSNHYNLADSLFKIGCKTTSKCICGENKENLNHVAWQCNLYN 751
>UniRef50_UPI00015B4678 Cluster: PREDICTED: similar to Lian-Aa1
retrotransposon protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Lian-Aa1 retrotransposon protein -
Nasonia vitripennis
Length = 1145
Score = 35.9 bits (79), Expect = 1.0
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -3
Query: 539 VNEMYGSKSYISFVWIPSHCGIKGNEIVDRIA 444
VN++ + + +W+P H I+GN+I DR+A
Sbjct: 386 VNQLTVHNNKVRLLWVPGHTAIRGNDIADRLA 417
>UniRef50_Q7M4J4 Cluster: RNA-directed DNA polymerase (EC 2.7.7.49)
homolog; n=3; Bombyx mori|Rep: RNA-directed DNA
polymerase (EC 2.7.7.49) homolog - Bombyx mori (Silk
moth)
Length = 1051
Score = 35.9 bits (79), Expect = 1.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -2
Query: 252 HETSSLIRMRLGHTCSPAHLATIGVLDSSKCECGADIGDLNHIILSCPLFD 100
++TS ++ GH LA + + + C+CGA D +H++ CPL+D
Sbjct: 932 YQTSQILT---GHGIFNKRLADMRLREGHACDCGAVEEDRDHVLWECPLYD 979
>UniRef50_O44315 Cluster: Reverse transcriptase; n=1; Dugesiella
sp.|Rep: Reverse transcriptase - Dugesiella sp
Length = 743
Score = 35.9 bits (79), Expect = 1.0
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -2
Query: 243 SSLIRMRLGHTCSPAHLATIGVLDSSKCECGADIGDLNHIILSCP 109
S + ++ H P +L GV++S +C CG ++G L+H + +CP
Sbjct: 672 SEMTQVLTKHAQYPEYLHRRGVINSPRCVCG-EMGSLDHYLAACP 715
>UniRef50_A7F6Z7 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 362
Score = 35.9 bits (79), Expect = 1.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEA 435
IS W+P H ++GNE+ D++A EA
Sbjct: 137 ISLNWVPGHTSVEGNELADKLAKEA 161
>UniRef50_A7EMT8 Cluster: Putative uncharacterized protein; n=2;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1249
Score = 35.9 bits (79), Expect = 1.0
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = -2
Query: 240 SLIRMRLGHTCSPAHLATIGVLDSSKCECGADIGDLNHIILSCPLF 103
+L ++++GH ++L G+ + C CG +H++L+CP++
Sbjct: 310 ALFQLKIGHGYFKSYLKRFGISSNDSCRCGGKESP-DHLLLNCPIY 354
Score = 34.7 bits (76), Expect = 2.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEA 435
IS W+P H ++GNE+ D +A EA
Sbjct: 218 ISLNWVPGHTSVQGNELADSLAKEA 242
>UniRef50_A6R8Y2 Cluster: Predicted protein; n=5; Onygenales|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 1913
Score = 35.9 bits (79), Expect = 1.0
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEA 435
+ F WIP+H G+ GNE DR+A A
Sbjct: 1718 VQFHWIPAHVGVPGNEEADRLAKRA 1742
Score = 34.7 bits (76), Expect = 2.4
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 246 TSSLIRMRLGHTCSPAHLATIGVLDSSKCECGADIGDLNHIILSC 112
+S + +MR G A+L I D+ KC+CG + HI+L C
Sbjct: 1812 SSVITQMRTGKIGLRAYLHDINKADTDKCQCGYGPQTVRHILLEC 1856
>UniRef50_UPI00015B4454 Cluster: PREDICTED: similar to Cat Eye
Syndrome critical region protein, partial; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to Cat Eye Syndrome
critical region protein, partial - Nasonia vitripennis
Length = 721
Score = 35.5 bits (78), Expect = 1.4
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 539 VNEMYGSKSYISFVWIPSHCGIKGNEIVDRIA 444
VN++ + + + +P H GI+GNEI DR+A
Sbjct: 280 VNQLTAHNNKVRLLCVPGHTGIRGNEIADRLA 311
>UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori|Rep:
Reverse transcriptase - Bombyx mori (Silk moth)
Length = 1076
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 246 TSSLIRMRLGHTCSPAHLATIGVLDSSKC-ECGADIGDLNHIILSCPLFD 100
T L+++ GH C +L IG +++C CG D+ H + CP ++
Sbjct: 949 TFRLVQVLTGHGCFGKYLRRIGAEPTTRCHHCGHDLDTAEHTLAVCPAWE 998
>UniRef50_A7ELY2 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 118
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEAIN 429
I WIP+H G+ GNE DR A E +N
Sbjct: 80 IELRWIPAHIGLCGNEAADRAAKEDVN 106
>UniRef50_A3LY19 Cluster: Predicted protein; n=3;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 289
Score = 35.1 bits (77), Expect = 1.8
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -3
Query: 539 VNEMYGSKSY--ISFVWIPSHCGIKGNEIVDRIANEAIN 429
VN+ Y K + + F + H G GNE DR+ANE N
Sbjct: 244 VNDKYSEKGWGKVEFHHVKGHAGDPGNEAADRLANEGAN 282
>UniRef50_A2G4D9 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 827
Score = 34.7 bits (76), Expect = 2.4
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Frame = -1
Query: 577 QPIYPILLDCRNLLMKCM----DQNLTYHLYGY 491
QP++P+LLDC NL C+ D N T LY Y
Sbjct: 11 QPLHPVLLDCLNLFKDCLTFHKDSNETEKLYTY 43
>UniRef50_A7EXQ0 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 650
Score = 34.7 bits (76), Expect = 2.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEA 435
IS W+P H ++GNE+ D +A EA
Sbjct: 592 ISLNWVPGHTSVQGNELADSLAKEA 616
>UniRef50_A7EVI9 Cluster: Putative uncharacterized protein; n=2;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 806
Score = 34.7 bits (76), Expect = 2.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEA 435
IS W+P H ++GNE+ D +A EA
Sbjct: 716 ISLNWVPGHTSVQGNELADSLAKEA 740
>UniRef50_UPI00015B4A79 Cluster: PREDICTED: similar to Lian-Aa1
retrotransposon protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Lian-Aa1 retrotransposon protein -
Nasonia vitripennis
Length = 493
Score = 34.3 bits (75), Expect = 3.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 539 VNEMYGSKSYISFVWIPSHCGIKGNEIVDRIANEA 435
+N + G + W+P H GI+GNEI D +A A
Sbjct: 308 LNILGGEVRKLFLYWVPGHHGIRGNEIADELAGIA 342
>UniRef50_A6XPI4 Cluster: Predicted protein; n=3; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 279
Score = 34.3 bits (75), Expect = 3.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEAIN 429
+ W P H GI+GNE DR+A A++
Sbjct: 239 VGLKWAPGHMGIEGNEEADRLAKRAVS 265
>UniRef50_A6RHF5 Cluster: Predicted protein; n=2; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 254
Score = 34.3 bits (75), Expect = 3.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEAIN 429
+ W P H GI+GNE DR+A A++
Sbjct: 64 VGLKWAPGHMGIEGNEEADRLAKRAVS 90
>UniRef50_A6R672 Cluster: Predicted protein; n=42; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1411
Score = 34.3 bits (75), Expect = 3.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEAIN 429
+ W P H GI+GNE DR+A A++
Sbjct: 1218 VGLKWAPGHMGIEGNEEADRLAKRAVS 1244
>UniRef50_A6QZP1 Cluster: Predicted protein; n=37; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 709
Score = 34.3 bits (75), Expect = 3.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 509 ISFVWIPSHCGIKGNEIVDRIANEAIN 429
+ W P H GI+GNE DR+A A++
Sbjct: 509 VGLKWAPGHMGIEGNEEADRLAKRAVS 535
>UniRef50_Q2Z0V7 Cluster: Putative Ribonuclease HI; n=1; Pseudomonas
phage EL|Rep: Putative Ribonuclease HI - Pseudomonas
phage EL
Length = 163
Score = 33.9 bits (74), Expect = 4.2
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3
Query: 539 VNEMYGSKSYISFVWIPSHCGIKGNEIVDRIANEAIN 429
+NE+ K+ + F W+ H G +GNE D++A +A N
Sbjct: 113 LNELL-KKNKVKFHWVKGHSGDEGNEKADQLAKDAAN 148
>UniRef50_Q5KPB0 Cluster: Ribonuclease H, putative; n=2;
Filobasidiella neoformans|Rep: Ribonuclease H, putative
- Cryptococcus neoformans (Filobasidiella neoformans)
Length = 321
Score = 33.9 bits (74), Expect = 4.2
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -3
Query: 524 GSKSYISFVWIPSHCGIKGNEIVDRIA 444
G+ + F ++P+H G++GNE DR+A
Sbjct: 238 GAAGRVKFKYVPAHSGVEGNEAADRLA 264
>UniRef50_Q2PIN6 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 1187
Score = 33.9 bits (74), Expect = 4.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 527 YGSKSYISFVWIPSHCGIKGNEIVDRIANE 438
Y ++ + WIP+H G+ GNE D A E
Sbjct: 987 YNMQNRVQIHWIPAHIGVPGNEAADEAARE 1016
>UniRef50_A7EW18 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 260
Score = 33.9 bits (74), Expect = 4.2
Identities = 12/48 (25%), Positives = 29/48 (60%)
Frame = -2
Query: 243 SSLIRMRLGHTCSPAHLATIGVLDSSKCECGADIGDLNHIILSCPLFD 100
S+L ++++GH ++L G+ + C CG + +H++L+C +++
Sbjct: 151 SALFQLKIGHGYFKSYLKRFGISTNDNCRCG-EWESPDHLLLNCSIYN 197
>UniRef50_A1WJR7 Cluster: Putative uncharacterized protein; n=1;
Verminephrobacter eiseniae EF01-2|Rep: Putative
uncharacterized protein - Verminephrobacter eiseniae
(strain EF01-2)
Length = 307
Score = 33.5 bits (73), Expect = 5.6
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 171 YPALRSSLDVPDYTCGLISSVSNWKSRGFKIIFVEPWFGRNGWLY 305
+P LR + D Y CG + +W + K+ F+EP F R G+L+
Sbjct: 154 FPELRLNGDFSHYYCGQEMTYGDWPA---KLAFMEPIFARTGFLH 195
>UniRef50_Q8AII1 Cluster: Gag-Pol polyprotein (Pr160Gag-Pol)
[Contains: Matrix protein p17 (MA); Capsid protein p24
(CA); Nucleocapsid protein p7 (NC); p6-pol (p6*);
Protease (EC 3.4.23.16) (Retropepsin) (PR); Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7)
(EC 3.1.26.4) (p66 RT); p51 RT; p15; Integrase (IN)];
n=133; Primate lentivirus group|Rep: Gag-Pol polyprotein
(Pr160Gag-Pol) [Contains: Matrix protein p17 (MA); Capsid
protein p24 (CA); Nucleocapsid protein p7 (NC); p6-pol
(p6*); Protease (EC 3.4.23.16) (Retropepsin) (PR);
Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC
2.7.7.7) (EC 3.1.26.4) (p66 RT); p51 RT; p15; Integrase
(IN)] - Simian immunodeficiency virus (isolate TAN1)
(SIV-cpz) (Chimpanzeeimmunodeficiency virus)
Length = 1462
Score = 33.5 bits (73), Expect = 5.6
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3
Query: 518 KSYISFVWIPSHCGIKGNEIVDRIANEAI 432
K+ I W+P+H GI GNE VD++ ++ I
Sbjct: 1142 KTAIYLAWVPAHKGIGGNEEVDKLVSKNI 1170
>UniRef50_P32542 Cluster: Pol polyprotein [Contains: Protease
(Retropepsin) (EC 3.4.23.-); Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
(RT); Integrase (IN)]; n=28; Equine infectious anemia
virus|Rep: Pol polyprotein [Contains: Protease
(Retropepsin) (EC 3.4.23.-); Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
(RT); Integrase (IN)] - Equine infectious anemia virus
(isolate CL22) (EIAV)
Length = 1146
Score = 33.5 bits (73), Expect = 5.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 542 PVNEMYGSKSYISFVWIPSHCGIKGNEIVDRIA 444
P+ + K + F W+P H GI GN++ D A
Sbjct: 703 PIIQNIREKEIVYFAWVPGHKGICGNQLADEAA 735
>UniRef50_Q596Q3 Cluster: Pol protein; n=76; Human immunodeficiency
virus 1|Rep: Pol protein - Human immunodeficiency virus
1
Length = 913
Score = 32.7 bits (71), Expect = 9.7
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -3
Query: 518 KSYISFVWIPSHCGIKGNEIVDRIANEAI 432
K Y+S W+P+H GI GNE VD++ + I
Sbjct: 595 KVYLS--WVPAHKGIGGNEQVDKLVSSGI 621
>UniRef50_Q7MAJ4 Cluster: GLYCYL-TRNA SYNTHETASE BETA CHAIN; n=3;
Epsilonproteobacteria|Rep: GLYCYL-TRNA SYNTHETASE BETA
CHAIN - Wolinella succinogenes
Length = 682
Score = 32.7 bits (71), Expect = 9.7
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -1
Query: 634 SNPDSKSSLQALAKFPFKSQPIYP-ILLDCRNLLMKCMDQNLTYHLY-GYLAIAELKEM 464
++P + L AL K + +L++C N L+K Q L H+Y +L IA++KE+
Sbjct: 622 THPSALEELSALLKLKEPLDQFFDHVLINCDNTLLKKNRQALIAHIYQAFLHIADIKEI 680
>UniRef50_Q5BGG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1411
Score = 32.7 bits (71), Expect = 9.7
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 497 WIPSHCGIKGNEIVDRIA 444
WIP H GI GNE+ D++A
Sbjct: 1228 WIPGHSGIAGNELADKLA 1245
>UniRef50_Q5B7Y7 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 960
Score = 32.7 bits (71), Expect = 9.7
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 497 WIPSHCGIKGNEIVDRIA 444
WIP H GI GNE+ D++A
Sbjct: 777 WIPGHSGIAGNELADKLA 794
>UniRef50_A3LU04 Cluster: Predicted protein; n=5;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 874
Score = 32.7 bits (71), Expect = 9.7
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -1
Query: 694 VDVWTL-LFIGDVKYLSDKSFSNPDSKSSLQALAKFPFKSQPIYPILLDCRNLLMKCMDQ 518
VD WTL +FI ++ Y F D K + + K K P +CRNL+ K + +
Sbjct: 677 VDWWTLGIFIYEMLY-GTTPFKGSDRKKTFANVLKKEVKFLDSQPASSNCRNLIKKLLIK 735
Query: 517 NLTYHLYGYLAIAELK 470
+ L + +E+K
Sbjct: 736 DEAKRLGSHTGASEIK 751
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,986,863
Number of Sequences: 1657284
Number of extensions: 13135193
Number of successful extensions: 32346
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 31333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32335
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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